Gene annotation
Transcriptome id Sobic.004G247100.1,Sobic.004G247100.2
Synonym Sb04g028700
Functional annotation peptidase, putative, expressed
UniProt C5XZA0 , A0A1Z5RNW9
Pfam PF01435
Panther DB PTHR22726 PTHR22726:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004222metalloendopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G51740 : Peptidase family M48 family protein
RAP-DB (Rice) LOC_Os02g50230.1 : peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a021950
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G247100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
2 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
3 Sobic.009G195700 hydrolase, alpha/beta fold family domain containing protein, expressed K01259: proline iminopeptidase
4 Sobic.007G047600 expressed protein -
5 Sobic.002G116500 methyltransferase, putative, expressed K00599: methyltransferase-like protein 6
6 Sobic.007G145400 expressed protein -
7 Sobic.007G051400 transmembrane 9 superfamily member, putative, expressed -
8 Sobic.007G102500 - -
9 Sobic.001G461300 PPR repeat domain containing protein, putative, expressed -
10 Sobic.003G230600 transcription factor X1, putative, expressed -
11 Sobic.004G075200 protein kinase PKN/PRK1, effector, putative, expressed -
12 Sobic.004G040200 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
13 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
14 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase
15 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
16 Sobic.002G252100 methyl-binding domain protein MBD, putative, expressed -
17 Sobic.006G245900 FAR1 family protein, expressed -
18 Sobic.010G179700 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
19 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
20 Sobic.003G050900 dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed K03845: alpha-1,3-mannosyltransferase


Gene co-expression network
sample Sobic004G247100 Sobic004G247100 Sobic006G212900 Sobic006G212900 Sobic004G247100--Sobic006G212900 Sobic001G467100 Sobic001G467100 Sobic004G247100--Sobic001G467100 Sobic009G195700 Sobic009G195700 Sobic004G247100--Sobic009G195700 Sobic007G047600 Sobic007G047600 Sobic004G247100--Sobic007G047600 Sobic002G116500 Sobic002G116500 Sobic004G247100--Sobic002G116500 Sobic007G145400 Sobic007G145400 Sobic004G247100--Sobic007G145400 Sobic007G051400 Sobic007G051400 Sobic004G247100--Sobic007G051400 Sobic007G102500 Sobic007G102500 Sobic004G247100--Sobic007G102500 Sobic001G461300 Sobic001G461300 Sobic004G247100--Sobic001G461300 Sobic003G023200 Sobic003G023200 Sobic006G212900--Sobic003G023200 Sobic006G212900--Sobic004G247100 Sobic003G193500 Sobic003G193500 Sobic006G212900--Sobic003G193500 Sobic006G212900--Sobic009G195700 Sobic004G256300 Sobic004G256300 Sobic006G212900--Sobic004G256300 Sobic003G129300 Sobic003G129300 Sobic006G212900--Sobic003G129300 Sobic008G116600 Sobic008G116600 Sobic006G212900--Sobic008G116600 Sobic003G222700 Sobic003G222700 Sobic006G212900--Sobic003G222700 Sobic006G212900--Sobic001G467100 Sobic004G208500 Sobic004G208500 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic001G467100--Sobic003G222700 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic005G110499 Sobic005G110499 Sobic001G467100--Sobic005G110499 Sobic009G195700--Sobic004G247100 Sobic009G195700--Sobic006G212900 Sobic002G142700 Sobic002G142700 Sobic009G195700--Sobic002G142700 Sobic001G403400 Sobic001G403400 Sobic009G195700--Sobic001G403400 Sobic009G195700--Sobic002G116500 Sobic008G059900 Sobic008G059900 Sobic009G195700--Sobic008G059900 Sobic001G004100 Sobic001G004100 Sobic009G195700--Sobic001G004100 Sobic010G073500 Sobic010G073500 Sobic009G195700--Sobic010G073500 Sobic009G195700--Sobic010G172400 Sobic002G412700 Sobic002G412700 Sobic007G047600--Sobic002G412700 Sobic007G047600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic007G047600--Sobic008G092800 Sobic004G356200 Sobic004G356200 Sobic007G047600--Sobic004G356200 Sobic003G360300 Sobic003G360300 Sobic007G047600--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic007G047600--Sobic008G080500 Sobic006G280100 Sobic006G280100 Sobic007G047600--Sobic006G280100 Sobic002G119600 Sobic002G119600 Sobic007G047600--Sobic002G119600 Sobic007G047600--Sobic001G467100 Sobic001G193500 Sobic001G193500 Sobic002G116500--Sobic001G193500 Sobic008G016100 Sobic008G016100 Sobic002G116500--Sobic008G016100 Sobic003G118400 Sobic003G118400 Sobic002G116500--Sobic003G118400 Sobic002G116500--Sobic004G247100 Sobic001G382200 Sobic001G382200 Sobic002G116500--Sobic001G382200 Sobic003G408300 Sobic003G408300 Sobic002G116500--Sobic003G408300 Sobic006G084000 Sobic006G084000 Sobic002G116500--Sobic006G084000 Sobic002G144275 Sobic002G144275 Sobic002G116500--Sobic002G144275 Sobic002G116500--Sobic009G195700 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic001G248100 Sobic001G248100 Sobic007G145400--Sobic001G248100 Sobic007G145400--Sobic002G119600 Sobic006G261400 Sobic006G261400 Sobic007G145400--Sobic006G261400 Sobic003G314700 Sobic003G314700 Sobic007G145400--Sobic003G314700 Sobic007G145400--Sobic001G467100 Sobic007G145400--Sobic008G092800 Sobic006G245900 Sobic006G245900 Sobic007G145400--Sobic006G245900 Sobic007G051400--Sobic002G142700 Sobic004G277400 Sobic004G277400 Sobic007G051400--Sobic004G277400 Sobic004G343200 Sobic004G343200 Sobic007G051400--Sobic004G343200 Sobic004G129500 Sobic004G129500 Sobic007G051400--Sobic004G129500 Sobic001G191900 Sobic001G191900 Sobic007G051400--Sobic001G191900 Sobic002G426100 Sobic002G426100 Sobic007G051400--Sobic002G426100 Sobic007G051400--Sobic010G172400 Sobic007G051400--Sobic004G256300 Sobic001G507200 Sobic001G507200 Sobic007G051400--Sobic001G507200 Sobic007G102500--Sobic006G245900 Sobic004G010500 Sobic004G010500 Sobic007G102500--Sobic004G010500 Sobic002G252100 Sobic002G252100 Sobic007G102500--Sobic002G252100 Sobic003G123100 Sobic003G123100 Sobic007G102500--Sobic003G123100 Sobic007G102500--Sobic004G247100 Sobic002G127200 Sobic002G127200 Sobic007G102500--Sobic002G127200 Sobic010G262100 Sobic010G262100 Sobic007G102500--Sobic010G262100 Sobic002G043000 Sobic002G043000 Sobic007G102500--Sobic002G043000 Sobic006G112700 Sobic006G112700 Sobic007G102500--Sobic006G112700 Sobic002G372500 Sobic002G372500 Sobic001G461300--Sobic002G372500 Sobic006G193300 Sobic006G193300 Sobic001G461300--Sobic006G193300 Sobic001G408600 Sobic001G408600 Sobic001G461300--Sobic001G408600 Sobic006G002800 Sobic006G002800 Sobic001G461300--Sobic006G002800 Sobic009G234700 Sobic009G234700 Sobic001G461300--Sobic009G234700 Sobic002G371600 Sobic002G371600 Sobic001G461300--Sobic002G371600 Sobic007G089800 Sobic007G089800 Sobic001G461300--Sobic007G089800 Sobic001G373000 Sobic001G373000 Sobic001G461300--Sobic001G373000 Sobic004G224600 Sobic004G224600 Sobic001G461300--Sobic004G224600
Octagon: transcription factors


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