Gene annotation
Transcriptome id Sobic.005G031000.3,Sobic.005G031000.1,Sobic.005G031000.2
Synonym Sb05g002630, GLDH, ATGLDH
Functional annotation FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
UniProt A0A1B6PPV8 , A0A1Z5RGN7 , A0A1B6PPW0
Pfam PF04030 PF01565
Panther DB PTHR13878 PTHR13878:SF37
NCBI CDD KOG4730; D-arabinono-1, 4-lactone oxidase
KEGG Orthology K00225; L-galactono-1,4-lactone dehydrogenase
Gene Ontology GO:0016020; membrane GO:0003885D-arabinono-1,4-lactone oxidase activity GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G47930 : L-galactono-1,4-lactone dehydrogenase
RAP-DB (Rice) LOC_Os12g04520.1 : FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a055163 , Zm00025a013063
Brachypodium KQJ92351
Barley HORVU5Hr1G043060.4 , HORVU5Hr1G043060.1 , HORVU5Hr1G043060.2 , HORVU5Hr1G043060.3
Wheat TraesCS5D02G140400 , TraesCS5D02G140400 , TraesCS5A02G132300 , TraesCS5A02G132300 , TraesCS5A02G132300 , TraesCS5B02G132600 , TraesCS5B02G132600
Populus -


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cDNA sequences
Sobic.005G031000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G356200 expressed protein -
2 Sobic.001G200200 tetratricopeptide repeat, putative, expressed -
3 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
4 Sobic.002G125800 phosphoglucomutase, putative, expressed -
5 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase
6 Sobic.006G237000 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed K00648: 3-oxoacyl-[acyl-carrier-protein] synthase III
7 Sobic.001G533100 GHMP kinases ATP-binding protein, putative, expressed K05305: fucokinase
8 Sobic.004G037200 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
9 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
10 Sobic.010G081700 PPR repeat domain containing protein, putative, expressed -
11 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
12 Sobic.010G197200 peroxiredoxin, putative, expressed -
13 Sobic.007G047600 expressed protein -
14 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
15 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
16 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
17 Sobic.009G151800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
18 Sobic.004G247100 peptidase, putative, expressed -
19 Sobic.005G168000 Rf1, mitochondrial precursor, putative, expressed -
20 Sobic.003G360300 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic005G031000 Sobic005G031000 Sobic004G356200 Sobic004G356200 Sobic005G031000--Sobic004G356200 Sobic001G200200 Sobic001G200200 Sobic005G031000--Sobic001G200200 Sobic008G059900 Sobic008G059900 Sobic005G031000--Sobic008G059900 Sobic002G125800 Sobic002G125800 Sobic005G031000--Sobic002G125800 Sobic001G434700 Sobic001G434700 Sobic005G031000--Sobic001G434700 Sobic006G237000 Sobic006G237000 Sobic005G031000--Sobic006G237000 Sobic001G533100 Sobic001G533100 Sobic005G031000--Sobic001G533100 Sobic004G037200 Sobic004G037200 Sobic005G031000--Sobic004G037200 Sobic010G155600 Sobic010G155600 Sobic005G031000--Sobic010G155600 Sobic004G356200--Sobic001G200200 Sobic002G371600 Sobic002G371600 Sobic004G356200--Sobic002G371600 Sobic004G356200--Sobic005G031000 Sobic001G248100 Sobic001G248100 Sobic004G356200--Sobic001G248100 Sobic002G137601 Sobic002G137601 Sobic004G356200--Sobic002G137601 Sobic002G160700 Sobic002G160700 Sobic004G356200--Sobic002G160700 Sobic007G047600 Sobic007G047600 Sobic004G356200--Sobic007G047600 Sobic004G030400 Sobic004G030400 Sobic004G356200--Sobic004G030400 Sobic001G085800 Sobic001G085800 Sobic004G356200--Sobic001G085800 Sobic001G200200--Sobic004G356200 Sobic001G200200--Sobic005G031000 Sobic002G386900 Sobic002G386900 Sobic001G200200--Sobic002G386900 Sobic001G200200--Sobic002G371600 Sobic001G200200--Sobic004G030400 Sobic006G181800 Sobic006G181800 Sobic001G200200--Sobic006G181800 Sobic006G191200 Sobic006G191200 Sobic001G200200--Sobic006G191200 Sobic006G029100 Sobic006G029100 Sobic001G200200--Sobic006G029100 Sobic001G200200--Sobic002G125800 Sobic010G197200 Sobic010G197200 Sobic008G059900--Sobic010G197200 Sobic008G059900--Sobic005G031000 Sobic001G199500 Sobic001G199500 Sobic008G059900--Sobic001G199500 Sobic004G253500 Sobic004G253500 Sobic008G059900--Sobic004G253500 Sobic010G073500 Sobic010G073500 Sobic008G059900--Sobic010G073500 Sobic003G102700 Sobic003G102700 Sobic008G059900--Sobic003G102700 Sobic006G071628 Sobic006G071628 Sobic008G059900--Sobic006G071628 Sobic008G059900--Sobic006G237000 Sobic003G392100 Sobic003G392100 Sobic008G059900--Sobic003G392100 Sobic002G125800--Sobic005G031000 Sobic002G125800--Sobic006G237000 Sobic002G125800--Sobic001G533100 Sobic002G125800--Sobic001G200200 Sobic001G004200 Sobic001G004200 Sobic002G125800--Sobic001G004200 Sobic002G125800--Sobic004G356200 Sobic010G192600 Sobic010G192600 Sobic002G125800--Sobic010G192600 Sobic003G166500 Sobic003G166500 Sobic002G125800--Sobic003G166500 Sobic002G125800--Sobic004G030400 Sobic001G434700--Sobic005G031000 Sobic001G434700--Sobic006G237000 Sobic004G247100 Sobic004G247100 Sobic001G434700--Sobic004G247100 Sobic001G434700--Sobic010G155600 Sobic001G434700--Sobic008G059900 Sobic009G020100 Sobic009G020100 Sobic001G434700--Sobic009G020100 Sobic003G230600 Sobic003G230600 Sobic001G434700--Sobic003G230600 Sobic001G434700--Sobic004G356200 Sobic008G097600 Sobic008G097600 Sobic001G434700--Sobic008G097600 Sobic006G237000--Sobic002G125800 Sobic006G237000--Sobic005G031000 Sobic006G237000--Sobic001G200200 Sobic006G237000--Sobic010G155600 Sobic010G003900 Sobic010G003900 Sobic006G237000--Sobic010G003900 Sobic002G155100 Sobic002G155100 Sobic006G237000--Sobic002G155100 Sobic006G237000--Sobic008G059900 Sobic005G098800 Sobic005G098800 Sobic006G237000--Sobic005G098800 Sobic001G537500 Sobic001G537500 Sobic006G237000--Sobic001G537500 Sobic001G533100--Sobic002G125800 Sobic001G533100--Sobic005G031000 Sobic004G034300 Sobic004G034300 Sobic001G533100--Sobic004G034300 Sobic004G336300 Sobic004G336300 Sobic001G533100--Sobic004G336300 Sobic003G130900 Sobic003G130900 Sobic001G533100--Sobic003G130900 Sobic002G426100 Sobic002G426100 Sobic001G533100--Sobic002G426100 Sobic005G129201 Sobic005G129201 Sobic001G533100--Sobic005G129201 Sobic007G173000 Sobic007G173000 Sobic001G533100--Sobic007G173000 Sobic003G005900 Sobic003G005900 Sobic001G533100--Sobic003G005900 Sobic004G037200--Sobic003G166500 Sobic004G037200--Sobic005G031000 Sobic004G037200--Sobic001G533100 Sobic004G037200--Sobic002G125800 Sobic004G037200--Sobic010G155600 Sobic008G072500 Sobic008G072500 Sobic004G037200--Sobic008G072500 Sobic001G203600 Sobic001G203600 Sobic004G037200--Sobic001G203600 Sobic003G202100 Sobic003G202100 Sobic004G037200--Sobic003G202100 Sobic003G048600 Sobic003G048600 Sobic004G037200--Sobic003G048600 Sobic010G155600--Sobic006G237000 Sobic010G155600--Sobic005G031000 Sobic010G155600--Sobic008G097600 Sobic010G155600--Sobic002G125800 Sobic010G155600--Sobic001G434700 Sobic004G275600 Sobic004G275600 Sobic010G155600--Sobic004G275600 Sobic010G155600--Sobic001G537500 Sobic010G155600--Sobic004G356200 Sobic010G155600--Sobic004G037200
Octagon: transcription factors


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