Gene annotation
Transcriptome id Sobic.003G420900.1
Synonym ATSFGH, SFGH, Sb03g045400
Functional annotation S-formylglutathione hydrolase, putative, expressed
UniProt C5XHR2
Pfam PF00326
Panther DB PTHR10061
NCBI CDD KOG3101; Esterase D
KEGG Orthology K01070; frmB, ESD, S-formylglutathione hydrolase
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis GO:0018738S-formylglutathione hydrolase activity


Orthologs (automatic annotation)
TAIR AT2G41530 : S-formylglutathione hydrolase
RAP-DB (Rice) LOC_Os01g71300.1 : S-formylglutathione hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a039160
Brachypodium KQK11464
Barley -
Wheat TraesCS3D02G473000 , TraesCS3A02G478800 , TraesCS3A02G478800 , TraesCS3A02G478800 , TraesCS3B02G522300 , TraesCS3B02G522300 , TraesCS3B02G522300
Populus -


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cDNA sequences
Sobic.003G420900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
2 Sobic.004G296800 3-isopropylmalate dehydratase small subunit 2, putative, expressed K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
3 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
4 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
5 Sobic.002G333100 transmembrane protein, putative, expressed -
6 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
7 Sobic.010G134500 exonuclease, putative, expressed -
8 Sobic.003G261200 formyl transferase, putative, expressed K00604: MTFMT, methionyl-tRNA formyltransferase
9 Sobic.001G543700 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
10 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
11 Sobic.009G201900 peptidyl-tRNA hydrolase, putative, expressed K04794: peptidyl-tRNA hydrolase, PTH2 family
12 Sobic.001G296400 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
13 Sobic.004G070800 tic21, putative, expressed -
14 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
15 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
16 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
17 Sobic.007G211100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03216: trmL, tRNA (cytidine/uridine-2'-O-)-methyltransferase
18 Sobic.002G244500 ATP phosphoribosyltransferase, putative, expressed K00765: ATP phosphoribosyltransferase
19 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
20 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase


Gene co-expression network
sample Sobic003G420900 Sobic003G420900 Sobic001G376700 Sobic001G376700 Sobic003G420900--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic003G420900--Sobic004G296800 Sobic003G165800 Sobic003G165800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic002G333100 Sobic002G333100 Sobic003G420900--Sobic002G333100 Sobic004G275600 Sobic004G275600 Sobic003G420900--Sobic004G275600 Sobic010G134500 Sobic010G134500 Sobic003G420900--Sobic010G134500 Sobic003G261200 Sobic003G261200 Sobic003G420900--Sobic003G261200 Sobic001G543700 Sobic001G543700 Sobic003G420900--Sobic001G543700 Sobic001G376700--Sobic004G296800 Sobic006G084500 Sobic006G084500 Sobic001G376700--Sobic006G084500 Sobic004G044200 Sobic004G044200 Sobic001G376700--Sobic004G044200 Sobic009G124000 Sobic009G124000 Sobic001G376700--Sobic009G124000 Sobic001G376700--Sobic003G420900 Sobic003G292300 Sobic003G292300 Sobic001G376700--Sobic003G292300 Sobic009G180800 Sobic009G180800 Sobic001G376700--Sobic009G180800 Sobic008G123600 Sobic008G123600 Sobic001G376700--Sobic008G123600 Sobic009G001500 Sobic009G001500 Sobic001G376700--Sobic009G001500 Sobic004G296800--Sobic001G376700 Sobic004G296800--Sobic001G543700 Sobic004G296800--Sobic004G044200 Sobic004G296800--Sobic003G420900 Sobic002G207900 Sobic002G207900 Sobic004G296800--Sobic002G207900 Sobic007G026200 Sobic007G026200 Sobic004G296800--Sobic007G026200 Sobic004G296800--Sobic008G123600 Sobic001G541300 Sobic001G541300 Sobic004G296800--Sobic001G541300 Sobic005G218201 Sobic005G218201 Sobic004G296800--Sobic005G218201 Sobic001G104300 Sobic001G104300 Sobic003G165800--Sobic001G104300 Sobic002G141900 Sobic002G141900 Sobic003G165800--Sobic002G141900 Sobic003G165800--Sobic003G420900 Sobic001G021500 Sobic001G021500 Sobic003G165800--Sobic001G021500 Sobic001G441200 Sobic001G441200 Sobic003G165800--Sobic001G441200 Sobic006G281066 Sobic006G281066 Sobic003G165800--Sobic006G281066 Sobic005G022000 Sobic005G022000 Sobic003G165800--Sobic005G022000 Sobic009G055900 Sobic009G055900 Sobic003G165800--Sobic009G055900 Sobic002G363500 Sobic002G363500 Sobic003G165800--Sobic002G363500 Sobic009G201900 Sobic009G201900 Sobic009G231100--Sobic009G201900 Sobic002G225000 Sobic002G225000 Sobic009G231100--Sobic002G225000 Sobic002G377300 Sobic002G377300 Sobic009G231100--Sobic002G377300 Sobic001G518200 Sobic001G518200 Sobic009G231100--Sobic001G518200 Sobic009G231100--Sobic003G420900 Sobic003G223000 Sobic003G223000 Sobic009G231100--Sobic003G223000 Sobic005G031000 Sobic005G031000 Sobic009G231100--Sobic005G031000 Sobic009G231100--Sobic001G104300 Sobic009G231100--Sobic005G022000 Sobic002G333100--Sobic003G420900 Sobic010G108900 Sobic010G108900 Sobic002G333100--Sobic010G108900 Sobic006G168400 Sobic006G168400 Sobic002G333100--Sobic006G168400 Sobic002G244500 Sobic002G244500 Sobic002G333100--Sobic002G244500 Sobic002G333100--Sobic001G376700 Sobic002G333100--Sobic004G296800 Sobic003G265500 Sobic003G265500 Sobic002G333100--Sobic003G265500 Sobic002G333100--Sobic009G124000 Sobic001G463500 Sobic001G463500 Sobic002G333100--Sobic001G463500 Sobic003G309300 Sobic003G309300 Sobic004G275600--Sobic003G309300 Sobic003G165101 Sobic003G165101 Sobic004G275600--Sobic003G165101 Sobic001G537500 Sobic001G537500 Sobic004G275600--Sobic001G537500 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic007G071900 Sobic007G071900 Sobic004G275600--Sobic007G071900 Sobic004G275600--Sobic003G420900 Sobic008G067100 Sobic008G067100 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic009G210100 Sobic009G210100 Sobic010G134500--Sobic009G210100 Sobic010G134500--Sobic001G104300 Sobic002G078000 Sobic002G078000 Sobic010G134500--Sobic002G078000 Sobic007G070000 Sobic007G070000 Sobic010G134500--Sobic007G070000 Sobic003G267500 Sobic003G267500 Sobic010G134500--Sobic003G267500 Sobic010G134500--Sobic003G420900 Sobic010G134500--Sobic005G022000 Sobic010G134500--Sobic002G363500 Sobic001G161400 Sobic001G161400 Sobic010G134500--Sobic001G161400 Sobic007G013400 Sobic007G013400 Sobic003G261200--Sobic007G013400 Sobic009G130800 Sobic009G130800 Sobic003G261200--Sobic009G130800 Sobic003G383500 Sobic003G383500 Sobic003G261200--Sobic003G383500 Sobic003G295800 Sobic003G295800 Sobic003G261200--Sobic003G295800 Sobic010G095200 Sobic010G095200 Sobic003G261200--Sobic010G095200 Sobic003G261200--Sobic009G001500 Sobic007G090537 Sobic007G090537 Sobic003G261200--Sobic007G090537 Sobic007G211100 Sobic007G211100 Sobic003G261200--Sobic007G211100 Sobic001G069500 Sobic001G069500 Sobic003G261200--Sobic001G069500 Sobic010G221600 Sobic010G221600 Sobic001G543700--Sobic010G221600 Sobic004G214400 Sobic004G214400 Sobic001G543700--Sobic004G214400 Sobic001G543700--Sobic006G281066 Sobic003G236300 Sobic003G236300 Sobic001G543700--Sobic003G236300 Sobic006G082500 Sobic006G082500 Sobic001G543700--Sobic006G082500 Sobic001G543700--Sobic004G296800 Sobic003G071600 Sobic003G071600 Sobic001G543700--Sobic003G071600 Sobic001G543700--Sobic003G265500 Sobic001G478600 Sobic001G478600 Sobic001G543700--Sobic001G478600
Octagon: transcription factors


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