Gene annotation
Transcriptome id Sobic.001G543700.1
Synonym Sb01g050600
Functional annotation palmitoyl-protein thioesterase 1 precursor, putative, expressed
UniProt C5WNN9
Pfam PF02089
Panther DB PTHR11247 PTHR11247:SF26
NCBI CDD KOG2541; Palmitoyl protein thioesterase
KEGG Orthology K01074; palmitoyl-protein thioesterase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60340 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g01150.1 : palmitoyl-protein thioesterase 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a000081
Brachypodium KQJ97819 , KQK24173 , KQK24172
Barley -
Wheat TraesCS4D02G366100 , TraesCS4B02G371300
Populus -


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cDNA sequences
Sobic.001G543700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
2 Sobic.004G214400 tic20, putative, expressed -
3 Sobic.006G281066 - -
4 Sobic.003G236300 tat pathway signal sequence family protein, expressed -
5 Sobic.006G082500 co-chaperone GrpE protein, putative, expressed -
6 Sobic.004G296800 3-isopropylmalate dehydratase small subunit 2, putative, expressed K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
7 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
8 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
9 Sobic.001G478600 uroporphyrinogen III synthase, putative, expressed K01719: hemD, uroporphyrinogen-III synthase
10 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
11 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
12 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
13 Sobic.002G378000 amidase family protein, putative, expressed -
14 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
15 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
16 Sobic.004G070800 tic21, putative, expressed -
17 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
18 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
19 Sobic.001G296400 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
20 Sobic.001G463500 FAD-linked sulfhydryl oxidase ALR, putative, expressed K17783: ERV1, GFER, mitochondrial FAD-linked sulfhydryl oxidase


Gene co-expression network
sample Sobic001G543700 Sobic001G543700 Sobic010G221600 Sobic010G221600 Sobic001G543700--Sobic010G221600 Sobic004G214400 Sobic004G214400 Sobic001G543700--Sobic004G214400 Sobic006G281066 Sobic006G281066 Sobic001G543700--Sobic006G281066 Sobic003G236300 Sobic003G236300 Sobic001G543700--Sobic003G236300 Sobic006G082500 Sobic006G082500 Sobic001G543700--Sobic006G082500 Sobic004G296800 Sobic004G296800 Sobic001G543700--Sobic004G296800 Sobic003G071600 Sobic003G071600 Sobic001G543700--Sobic003G071600 Sobic003G265500 Sobic003G265500 Sobic001G543700--Sobic003G265500 Sobic001G478600 Sobic001G478600 Sobic001G543700--Sobic001G478600 Sobic010G221600--Sobic003G265500 Sobic010G221600--Sobic001G543700 Sobic008G090900 Sobic008G090900 Sobic010G221600--Sobic008G090900 Sobic010G221600--Sobic004G214400 Sobic004G003900 Sobic004G003900 Sobic010G221600--Sobic004G003900 Sobic010G221600--Sobic001G478600 Sobic002G189600 Sobic002G189600 Sobic010G221600--Sobic002G189600 Sobic004G208600 Sobic004G208600 Sobic010G221600--Sobic004G208600 Sobic003G292300 Sobic003G292300 Sobic010G221600--Sobic003G292300 Sobic001G375000 Sobic001G375000 Sobic004G214400--Sobic001G375000 Sobic004G263200 Sobic004G263200 Sobic004G214400--Sobic004G263200 Sobic004G214400--Sobic006G281066 Sobic007G101300 Sobic007G101300 Sobic004G214400--Sobic007G101300 Sobic006G088000 Sobic006G088000 Sobic004G214400--Sobic006G088000 Sobic001G433100 Sobic001G433100 Sobic004G214400--Sobic001G433100 Sobic010G027200 Sobic010G027200 Sobic004G214400--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic004G214400--Sobic006G237100 Sobic004G214400--Sobic004G003900 Sobic006G281066--Sobic004G214400 Sobic001G104300 Sobic001G104300 Sobic006G281066--Sobic001G104300 Sobic006G281066--Sobic001G543700 Sobic002G363500 Sobic002G363500 Sobic006G281066--Sobic002G363500 Sobic001G395300 Sobic001G395300 Sobic006G281066--Sobic001G395300 Sobic006G281066--Sobic003G236300 Sobic006G281066--Sobic010G027200 Sobic002G140000 Sobic002G140000 Sobic006G281066--Sobic002G140000 Sobic001G321400 Sobic001G321400 Sobic006G281066--Sobic001G321400 Sobic002G124100 Sobic002G124100 Sobic003G236300--Sobic002G124100 Sobic003G236300--Sobic006G281066 Sobic008G130700 Sobic008G130700 Sobic003G236300--Sobic008G130700 Sobic003G236300--Sobic001G543700 Sobic006G263800 Sobic006G263800 Sobic003G236300--Sobic006G263800 Sobic002G190100 Sobic002G190100 Sobic003G236300--Sobic002G190100 Sobic005G141000 Sobic005G141000 Sobic003G236300--Sobic005G141000 Sobic009G001500 Sobic009G001500 Sobic003G236300--Sobic009G001500 Sobic004G109000 Sobic004G109000 Sobic003G236300--Sobic004G109000 Sobic006G082500--Sobic001G543700 Sobic009G085200 Sobic009G085200 Sobic006G082500--Sobic009G085200 Sobic005G184300 Sobic005G184300 Sobic006G082500--Sobic005G184300 Sobic006G082500--Sobic010G221600 Sobic006G082500--Sobic004G214400 Sobic006G082500--Sobic003G265500 Sobic010G255100 Sobic010G255100 Sobic006G082500--Sobic010G255100 Sobic003G225100 Sobic003G225100 Sobic006G082500--Sobic003G225100 Sobic004G054500 Sobic004G054500 Sobic006G082500--Sobic004G054500 Sobic001G376700 Sobic001G376700 Sobic004G296800--Sobic001G376700 Sobic004G296800--Sobic001G543700 Sobic004G044200 Sobic004G044200 Sobic004G296800--Sobic004G044200 Sobic003G420900 Sobic003G420900 Sobic004G296800--Sobic003G420900 Sobic002G207900 Sobic002G207900 Sobic004G296800--Sobic002G207900 Sobic007G026200 Sobic007G026200 Sobic004G296800--Sobic007G026200 Sobic008G123600 Sobic008G123600 Sobic004G296800--Sobic008G123600 Sobic001G541300 Sobic001G541300 Sobic004G296800--Sobic001G541300 Sobic005G218201 Sobic005G218201 Sobic004G296800--Sobic005G218201 Sobic001G296400 Sobic001G296400 Sobic003G071600--Sobic001G296400 Sobic009G083300 Sobic009G083300 Sobic003G071600--Sobic009G083300 Sobic002G064400 Sobic002G064400 Sobic003G071600--Sobic002G064400 Sobic008G008500 Sobic008G008500 Sobic003G071600--Sobic008G008500 Sobic003G071600--Sobic003G265500 Sobic003G071600--Sobic004G208600 Sobic005G084000 Sobic005G084000 Sobic003G071600--Sobic005G084000 Sobic003G071600--Sobic001G543700 Sobic004G015700 Sobic004G015700 Sobic003G071600--Sobic004G015700 Sobic003G265500--Sobic003G225100 Sobic003G265500--Sobic005G184300 Sobic003G085000 Sobic003G085000 Sobic003G265500--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic003G265500--Sobic001G424300 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic004G065300 Sobic004G065300 Sobic003G265500--Sobic004G065300 Sobic002G353300 Sobic002G353300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800 Sobic001G478600--Sobic001G433100 Sobic001G478600--Sobic010G221600 Sobic006G155100 Sobic006G155100 Sobic001G478600--Sobic006G155100 Sobic001G478600--Sobic008G090900 Sobic001G478600--Sobic002G189600 Sobic001G478600--Sobic004G003900 Sobic001G025800 Sobic001G025800 Sobic001G478600--Sobic001G025800 Sobic001G003900 Sobic001G003900 Sobic001G478600--Sobic001G003900 Sobic008G011300 Sobic008G011300 Sobic001G478600--Sobic008G011300
Octagon: transcription factors


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