Gene annotation
Transcriptome id Sobic.006G082500.1
Synonym Sb06g016920
Functional annotation co-chaperone GrpE protein, putative, expressed
UniProt C5Y8N1
Pfam PF01025
Panther DB PTHR21237 PTHR21237:SF4
NCBI CDD KOG3003; Molecular chaperone of the GrpE family
KEGG Orthology -
Gene Ontology GO:0006457; protein folding GO:0000774adenyl-nucleotide exchange factor activity


Orthologs (automatic annotation)
TAIR AT1G36390 : Co-chaperone GrpE family protein
RAP-DB (Rice) LOC_Os04g35180.2 : co-chaperone GrpE protein, putative, expressed
MaizeGDB (Corn) Zm00025a056071 , Zm00025a011379
Brachypodium KQJ82650
Barley HORVU2Hr1G075280.2 , HORVU2Hr1G075280.3 , HORVU2Hr1G075280.1 , HORVU2Hr1G075280.4
Wheat TraesCS2B02G320000
Populus -


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cDNA sequences
Sobic.006G082500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G543700 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
2 Sobic.009G085200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
3 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
4 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
5 Sobic.004G214400 tic20, putative, expressed -
6 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
7 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
8 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
9 Sobic.004G054500 porphobilinogen deaminase, chloroplast precursor, putative, expressed K01749: hemC, hydroxymethylbilane synthase
10 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
11 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
12 Sobic.010G153600 pentatricopeptide, putative, expressed -
13 Sobic.001G379700 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
14 Sobic.006G256600 expressed protein -
15 Sobic.007G143700 immunophilin(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
16 Sobic.004G225600 - -
17 Sobic.003G157400 TPR repeat, putative, expressed -
18 Sobic.004G212400 co-chaperone GrpE protein, putative, expressed K03687: molecular chaperone GrpE
19 Sobic.007G095500 expressed protein -
20 Sobic.007G101300 expressed protein -


Gene co-expression network
sample Sobic006G082500 Sobic006G082500 Sobic001G543700 Sobic001G543700 Sobic006G082500--Sobic001G543700 Sobic009G085200 Sobic009G085200 Sobic006G082500--Sobic009G085200 Sobic005G184300 Sobic005G184300 Sobic006G082500--Sobic005G184300 Sobic010G221600 Sobic010G221600 Sobic006G082500--Sobic010G221600 Sobic004G214400 Sobic004G214400 Sobic006G082500--Sobic004G214400 Sobic003G265500 Sobic003G265500 Sobic006G082500--Sobic003G265500 Sobic010G255100 Sobic010G255100 Sobic006G082500--Sobic010G255100 Sobic003G225100 Sobic003G225100 Sobic006G082500--Sobic003G225100 Sobic004G054500 Sobic004G054500 Sobic006G082500--Sobic004G054500 Sobic001G543700--Sobic010G221600 Sobic001G543700--Sobic004G214400 Sobic006G281066 Sobic006G281066 Sobic001G543700--Sobic006G281066 Sobic003G236300 Sobic003G236300 Sobic001G543700--Sobic003G236300 Sobic001G543700--Sobic006G082500 Sobic004G296800 Sobic004G296800 Sobic001G543700--Sobic004G296800 Sobic003G071600 Sobic003G071600 Sobic001G543700--Sobic003G071600 Sobic001G543700--Sobic003G265500 Sobic001G478600 Sobic001G478600 Sobic001G543700--Sobic001G478600 Sobic004G065300 Sobic004G065300 Sobic009G085200--Sobic004G065300 Sobic003G085000 Sobic003G085000 Sobic009G085200--Sobic003G085000 Sobic009G085200--Sobic010G255100 Sobic005G117300 Sobic005G117300 Sobic009G085200--Sobic005G117300 Sobic006G055800 Sobic006G055800 Sobic009G085200--Sobic006G055800 Sobic008G090900 Sobic008G090900 Sobic009G085200--Sobic008G090900 Sobic002G109000 Sobic002G109000 Sobic009G085200--Sobic002G109000 Sobic003G271900 Sobic003G271900 Sobic009G085200--Sobic003G271900 Sobic003G128400 Sobic003G128400 Sobic009G085200--Sobic003G128400 Sobic001G099000 Sobic001G099000 Sobic005G184300--Sobic001G099000 Sobic007G101300 Sobic007G101300 Sobic005G184300--Sobic007G101300 Sobic005G184300--Sobic003G128400 Sobic002G158800 Sobic002G158800 Sobic005G184300--Sobic002G158800 Sobic001G003900 Sobic001G003900 Sobic005G184300--Sobic001G003900 Sobic002G297400 Sobic002G297400 Sobic005G184300--Sobic002G297400 Sobic002G081500 Sobic002G081500 Sobic005G184300--Sobic002G081500 Sobic005G184300--Sobic006G055800 Sobic005G110481 Sobic005G110481 Sobic005G184300--Sobic005G110481 Sobic010G221600--Sobic003G265500 Sobic010G221600--Sobic001G543700 Sobic010G221600--Sobic008G090900 Sobic010G221600--Sobic004G214400 Sobic004G003900 Sobic004G003900 Sobic010G221600--Sobic004G003900 Sobic010G221600--Sobic001G478600 Sobic002G189600 Sobic002G189600 Sobic010G221600--Sobic002G189600 Sobic004G208600 Sobic004G208600 Sobic010G221600--Sobic004G208600 Sobic003G292300 Sobic003G292300 Sobic010G221600--Sobic003G292300 Sobic001G375000 Sobic001G375000 Sobic004G214400--Sobic001G375000 Sobic004G263200 Sobic004G263200 Sobic004G214400--Sobic004G263200 Sobic004G214400--Sobic006G281066 Sobic004G214400--Sobic007G101300 Sobic006G088000 Sobic006G088000 Sobic004G214400--Sobic006G088000 Sobic001G433100 Sobic001G433100 Sobic004G214400--Sobic001G433100 Sobic010G027200 Sobic010G027200 Sobic004G214400--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic004G214400--Sobic006G237100 Sobic004G214400--Sobic004G003900 Sobic003G265500--Sobic003G225100 Sobic003G265500--Sobic005G184300 Sobic003G265500--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic003G265500--Sobic001G424300 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic003G265500--Sobic004G065300 Sobic002G353300 Sobic002G353300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800 Sobic006G256600 Sobic006G256600 Sobic010G255100--Sobic006G256600 Sobic010G255100--Sobic003G085000 Sobic001G382800 Sobic001G382800 Sobic010G255100--Sobic001G382800 Sobic010G255100--Sobic006G055800 Sobic005G014700 Sobic005G014700 Sobic010G255100--Sobic005G014700 Sobic010G255100--Sobic003G128400 Sobic006G210400 Sobic006G210400 Sobic010G255100--Sobic006G210400 Sobic001G308200 Sobic001G308200 Sobic010G255100--Sobic001G308200 Sobic001G102500 Sobic001G102500 Sobic010G255100--Sobic001G102500 Sobic001G122400 Sobic001G122400 Sobic003G225100--Sobic001G122400 Sobic007G171800 Sobic007G171800 Sobic003G225100--Sobic007G171800 Sobic003G225100--Sobic005G110481 Sobic010G095200 Sobic010G095200 Sobic003G225100--Sobic010G095200 Sobic004G335800 Sobic004G335800 Sobic003G225100--Sobic004G335800 Sobic007G013400 Sobic007G013400 Sobic003G225100--Sobic007G013400 Sobic002G251400 Sobic002G251400 Sobic003G225100--Sobic002G251400 Sobic003G386300 Sobic003G386300 Sobic003G225100--Sobic003G386300 Sobic001G527100 Sobic001G527100 Sobic003G225100--Sobic001G527100 Sobic001G203000 Sobic001G203000 Sobic004G054500--Sobic001G203000 Sobic008G051000 Sobic008G051000 Sobic004G054500--Sobic008G051000 Sobic007G143700 Sobic007G143700 Sobic004G054500--Sobic007G143700 Sobic004G317900 Sobic004G317900 Sobic004G054500--Sobic004G317900 Sobic001G040000 Sobic001G040000 Sobic004G054500--Sobic001G040000 Sobic010G255600 Sobic010G255600 Sobic004G054500--Sobic010G255600 Sobic004G054500--Sobic004G335800 Sobic003G157400 Sobic003G157400 Sobic004G054500--Sobic003G157400 Sobic004G054500--Sobic003G386300
Octagon: transcription factors


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