Gene annotation
Transcriptome id Sobic.002G156100.3,Sobic.002G156100.2,Sobic.002G156100.4,Sobic.002G156100.1
Synonym Sb02g019520
Functional annotation phosphoglycerate mutase, putative, expressed
UniProt A0A1W0W457 , C5X8A4
Pfam PF00300
Panther DB PTHR23029 PTHR23029:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52155 : Phosphoglycerate mutase family protein
RAP-DB (Rice) LOC_Os09g11510.1 : phosphoglycerate mutase, putative, expressed
MaizeGDB (Corn) Zm00025a013657 , Zm00025a046283
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G162800 expressed protein -
2 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
3 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
4 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
5 Sobic.003G045300 cobalt ion transporter, putative, expressed -
6 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
7 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
8 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
9 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
10 Sobic.002G181132 - -
11 Sobic.006G088000 translocon Tic40, putative, expressed -
12 Sobic.001G249400 tetrapyrrole methylase family protein, putative, expressed K07056: 16S rRNA (cytidine1402-2'-O)-methyltransferase
13 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
14 Sobic.004G225600 - -
15 Sobic.008G130900 ribosomal protein S6, putative, expressed -
16 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
17 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
19 Sobic.003G345900 histone deacetylase, putative, expressed -
20 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase


Gene co-expression network
sample Sobic002G156100 Sobic002G156100 Sobic003G162800 Sobic003G162800 Sobic002G156100--Sobic003G162800 Sobic001G375000 Sobic001G375000 Sobic002G156100--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic002G156100--Sobic003G128400 Sobic001G382800 Sobic001G382800 Sobic002G156100--Sobic001G382800 Sobic003G045300 Sobic003G045300 Sobic002G156100--Sobic003G045300 Sobic010G255100 Sobic010G255100 Sobic002G156100--Sobic010G255100 Sobic008G067100 Sobic008G067100 Sobic002G156100--Sobic008G067100 Sobic005G014700 Sobic005G014700 Sobic002G156100--Sobic005G014700 Sobic001G424300 Sobic001G424300 Sobic002G156100--Sobic001G424300 Sobic003G162800--Sobic001G375000 Sobic003G327200 Sobic003G327200 Sobic003G162800--Sobic003G327200 Sobic003G162800--Sobic002G156100 Sobic003G345900 Sobic003G345900 Sobic003G162800--Sobic003G345900 Sobic002G181132 Sobic002G181132 Sobic003G162800--Sobic002G181132 Sobic004G003900 Sobic004G003900 Sobic003G162800--Sobic004G003900 Sobic003G162800--Sobic003G045300 Sobic001G514100 Sobic001G514100 Sobic003G162800--Sobic001G514100 Sobic010G027200 Sobic010G027200 Sobic003G162800--Sobic010G027200 Sobic001G375000--Sobic003G128400 Sobic001G375000--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic001G375000--Sobic006G088000 Sobic001G375000--Sobic004G003900 Sobic001G375000--Sobic003G045300 Sobic001G375000--Sobic010G027200 Sobic001G448600 Sobic001G448600 Sobic001G375000--Sobic001G448600 Sobic006G237100 Sobic006G237100 Sobic001G375000--Sobic006G237100 Sobic001G375000--Sobic002G156100 Sobic003G128400--Sobic001G375000 Sobic007G101300 Sobic007G101300 Sobic003G128400--Sobic007G101300 Sobic003G128400--Sobic003G045300 Sobic005G184300 Sobic005G184300 Sobic003G128400--Sobic005G184300 Sobic003G128400--Sobic004G003900 Sobic006G055800 Sobic006G055800 Sobic003G128400--Sobic006G055800 Sobic003G128400--Sobic002G156100 Sobic002G297400 Sobic002G297400 Sobic003G128400--Sobic002G297400 Sobic003G128400--Sobic010G255100 Sobic001G382800--Sobic010G255100 Sobic001G382800--Sobic003G128400 Sobic008G090900 Sobic008G090900 Sobic001G382800--Sobic008G090900 Sobic001G003900 Sobic001G003900 Sobic001G382800--Sobic001G003900 Sobic001G382800--Sobic002G156100 Sobic001G382800--Sobic001G375000 Sobic001G382800--Sobic006G088000 Sobic002G293600 Sobic002G293600 Sobic001G382800--Sobic002G293600 Sobic001G382800--Sobic003G045300 Sobic003G045300--Sobic003G128400 Sobic003G045300--Sobic001G375000 Sobic003G045300--Sobic001G003900 Sobic003G045300--Sobic002G181132 Sobic009G092900 Sobic009G092900 Sobic003G045300--Sobic009G092900 Sobic003G045300--Sobic004G003900 Sobic003G045300--Sobic005G184300 Sobic003G045300--Sobic003G162800 Sobic003G045300--Sobic008G090900 Sobic006G256600 Sobic006G256600 Sobic010G255100--Sobic006G256600 Sobic003G085000 Sobic003G085000 Sobic010G255100--Sobic003G085000 Sobic010G255100--Sobic001G382800 Sobic010G255100--Sobic006G055800 Sobic010G255100--Sobic005G014700 Sobic010G255100--Sobic003G128400 Sobic006G210400 Sobic006G210400 Sobic010G255100--Sobic006G210400 Sobic001G308200 Sobic001G308200 Sobic010G255100--Sobic001G308200 Sobic001G102500 Sobic001G102500 Sobic010G255100--Sobic001G102500 Sobic008G067100--Sobic008G090900 Sobic007G095500 Sobic007G095500 Sobic008G067100--Sobic007G095500 Sobic004G144400 Sobic004G144400 Sobic008G067100--Sobic004G144400 Sobic008G067100--Sobic002G156100 Sobic008G067100--Sobic001G382800 Sobic008G067100--Sobic004G003900 Sobic008G067100--Sobic003G128400 Sobic004G208600 Sobic004G208600 Sobic008G067100--Sobic004G208600 Sobic002G378000 Sobic002G378000 Sobic008G067100--Sobic002G378000 Sobic003G067100 Sobic003G067100 Sobic005G014700--Sobic003G067100 Sobic005G014700--Sobic001G102500 Sobic002G043600 Sobic002G043600 Sobic005G014700--Sobic002G043600 Sobic001G327800 Sobic001G327800 Sobic005G014700--Sobic001G327800 Sobic005G014700--Sobic010G255100 Sobic004G238900 Sobic004G238900 Sobic005G014700--Sobic004G238900 Sobic004G163800 Sobic004G163800 Sobic005G014700--Sobic004G163800 Sobic005G014700--Sobic002G156100 Sobic001G032700 Sobic001G032700 Sobic005G014700--Sobic001G032700 Sobic003G310100 Sobic003G310100 Sobic001G424300--Sobic003G310100 Sobic001G489800 Sobic001G489800 Sobic001G424300--Sobic001G489800 Sobic001G424300--Sobic003G128400 Sobic009G131600 Sobic009G131600 Sobic001G424300--Sobic009G131600 Sobic001G281500 Sobic001G281500 Sobic001G424300--Sobic001G281500 Sobic005G002900 Sobic005G002900 Sobic001G424300--Sobic005G002900 Sobic001G424300--Sobic006G055800 Sobic001G424300--Sobic002G156100 Sobic001G437200 Sobic001G437200 Sobic001G424300--Sobic001G437200
Octagon: transcription factors


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