Gene annotation
Transcriptome id Sobic.003G162800.1
Synonym Sb03g014730
Functional annotation expressed protein
UniProt C5XKJ3
Pfam -
Panther DB PTHR10366 PTHR10366:SF389
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39080 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os01g26920.1 : expressed protein
MaizeGDB (Corn) Zm00025a024529
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
2 Sobic.003G327200 GHMP kinases ATP-binding protein, putative, expressed K00919: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
3 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
4 Sobic.003G345900 histone deacetylase, putative, expressed -
5 Sobic.002G181132 - -
6 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
7 Sobic.003G045300 cobalt ion transporter, putative, expressed -
8 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
11 Sobic.006G088000 translocon Tic40, putative, expressed -
12 Sobic.004G263200 uncharacterized protein At1g26090, chloroplast precursor, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
13 Sobic.001G003900 pentatricopeptide, putative, expressed -
14 Sobic.004G225600 - -
15 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
16 Sobic.001G022500 tRNA synthetases class II domain containing protein, expressed K04567: KARS, lysyl-tRNA synthetase, class II
17 Sobic.003G434700 tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA, putative, expressed K03495: gidA, mnmG, tRNA uridine 5-carboxymethylaminomethyl modification enzyme
18 Sobic.007G015300 calreticulin family protein, expressed -
19 Sobic.003G040000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
20 Sobic.001G249400 tetrapyrrole methylase family protein, putative, expressed K07056: 16S rRNA (cytidine1402-2'-O)-methyltransferase


Gene co-expression network
sample Sobic003G162800 Sobic003G162800 Sobic001G375000 Sobic001G375000 Sobic003G162800--Sobic001G375000 Sobic003G327200 Sobic003G327200 Sobic003G162800--Sobic003G327200 Sobic002G156100 Sobic002G156100 Sobic003G162800--Sobic002G156100 Sobic003G345900 Sobic003G345900 Sobic003G162800--Sobic003G345900 Sobic002G181132 Sobic002G181132 Sobic003G162800--Sobic002G181132 Sobic004G003900 Sobic004G003900 Sobic003G162800--Sobic004G003900 Sobic003G045300 Sobic003G045300 Sobic003G162800--Sobic003G045300 Sobic001G514100 Sobic001G514100 Sobic003G162800--Sobic001G514100 Sobic010G027200 Sobic010G027200 Sobic003G162800--Sobic010G027200 Sobic003G128400 Sobic003G128400 Sobic001G375000--Sobic003G128400 Sobic001G375000--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic001G375000--Sobic006G088000 Sobic001G375000--Sobic004G003900 Sobic001G375000--Sobic003G045300 Sobic001G375000--Sobic010G027200 Sobic001G448600 Sobic001G448600 Sobic001G375000--Sobic001G448600 Sobic006G237100 Sobic006G237100 Sobic001G375000--Sobic006G237100 Sobic001G375000--Sobic002G156100 Sobic003G327200--Sobic003G162800 Sobic003G327200--Sobic001G375000 Sobic001G003900 Sobic001G003900 Sobic003G327200--Sobic001G003900 Sobic004G263200 Sobic004G263200 Sobic003G327200--Sobic004G263200 Sobic003G327200--Sobic003G128400 Sobic003G327200--Sobic001G514100 Sobic007G116100 Sobic007G116100 Sobic003G327200--Sobic007G116100 Sobic003G327200--Sobic010G027200 Sobic001G022500 Sobic001G022500 Sobic003G327200--Sobic001G022500 Sobic002G156100--Sobic003G162800 Sobic002G156100--Sobic001G375000 Sobic002G156100--Sobic003G128400 Sobic001G382800 Sobic001G382800 Sobic002G156100--Sobic001G382800 Sobic002G156100--Sobic003G045300 Sobic010G255100 Sobic010G255100 Sobic002G156100--Sobic010G255100 Sobic008G067100 Sobic008G067100 Sobic002G156100--Sobic008G067100 Sobic005G014700 Sobic005G014700 Sobic002G156100--Sobic005G014700 Sobic001G424300 Sobic001G424300 Sobic002G156100--Sobic001G424300 Sobic003G345900--Sobic003G162800 Sobic003G345900--Sobic004G003900 Sobic003G345900--Sobic002G181132 Sobic003G345900--Sobic001G375000 Sobic003G345900--Sobic006G088000 Sobic003G345900--Sobic002G156100 Sobic003G345900--Sobic010G027200 Sobic006G217000 Sobic006G217000 Sobic003G345900--Sobic006G217000 Sobic003G345900--Sobic004G263200 Sobic006G166500 Sobic006G166500 Sobic002G181132--Sobic006G166500 Sobic002G181132--Sobic003G045300 Sobic002G181132--Sobic004G003900 Sobic002G181132--Sobic001G375000 Sobic002G181132--Sobic003G162800 Sobic008G090900 Sobic008G090900 Sobic002G181132--Sobic008G090900 Sobic009G092900 Sobic009G092900 Sobic002G181132--Sobic009G092900 Sobic002G181132--Sobic003G345900 Sobic002G181132--Sobic002G156100 Sobic004G003900--Sobic001G375000 Sobic004G003900--Sobic008G090900 Sobic004G003900--Sobic003G128400 Sobic004G003900--Sobic009G092900 Sobic004G003900--Sobic002G181132 Sobic004G003900--Sobic003G045300 Sobic004G003900--Sobic003G162800 Sobic004G003900--Sobic006G088000 Sobic004G003900--Sobic001G003900 Sobic003G045300--Sobic003G128400 Sobic003G045300--Sobic001G375000 Sobic003G045300--Sobic001G003900 Sobic003G045300--Sobic002G181132 Sobic003G045300--Sobic009G092900 Sobic003G045300--Sobic004G003900 Sobic005G184300 Sobic005G184300 Sobic003G045300--Sobic005G184300 Sobic003G045300--Sobic003G162800 Sobic003G045300--Sobic008G090900 Sobic001G514100--Sobic003G162800 Sobic001G281500 Sobic001G281500 Sobic001G514100--Sobic001G281500 Sobic001G514100--Sobic003G327200 Sobic005G197300 Sobic005G197300 Sobic001G514100--Sobic005G197300 Sobic001G514100--Sobic001G375000 Sobic001G514100--Sobic003G128400 Sobic001G494500 Sobic001G494500 Sobic001G514100--Sobic001G494500 Sobic002G297400 Sobic002G297400 Sobic001G514100--Sobic002G297400 Sobic001G514100--Sobic001G382800 Sobic002G140000 Sobic002G140000 Sobic010G027200--Sobic002G140000 Sobic010G027200--Sobic001G375000 Sobic001G099000 Sobic001G099000 Sobic010G027200--Sobic001G099000 Sobic010G027200--Sobic007G116100 Sobic010G027200--Sobic006G237100 Sobic007G015300 Sobic007G015300 Sobic010G027200--Sobic007G015300 Sobic010G027200--Sobic005G184300 Sobic004G338300 Sobic004G338300 Sobic010G027200--Sobic004G338300 Sobic009G104700 Sobic009G104700 Sobic010G027200--Sobic009G104700
Octagon: transcription factors


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