Gene annotation
Transcriptome id Sobic.003G045300.3,Sobic.003G045300.2,Sobic.003G045300.1
Synonym Sb03g003980
Functional annotation cobalt ion transporter, putative, expressed
UniProt C5XMS4 , A0A1B6Q1B3
Pfam PF02361
Panther DB PTHR33514 PTHR33514:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21580 : cobalt ion transmembrane transporters
RAP-DB (Rice) LOC_Os05g33230.1 : cobalt ion transporter, putative, expressed
MaizeGDB (Corn) Zm00025a037028
Brachypodium KQK06354
Barley HORVU1Hr1G061930.1 , HORVU1Hr1G061790.2 , HORVU1Hr1G061790.3 , HORVU1Hr1G061790.1 , HORVU1Hr1G061790.5
Wheat TraesCS1A02G250800 , TraesCS1D02G250400 , TraesCS1B02G261400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
2 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
3 Sobic.001G003900 pentatricopeptide, putative, expressed -
4 Sobic.002G181132 - -
5 Sobic.009G092900 N-dimethylguanosine tRNA methyltransferase, putative, expressed K00555: TRMT1, tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
6 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
7 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
8 Sobic.003G162800 expressed protein -
9 Sobic.008G090900 expressed protein -
10 Sobic.006G088000 translocon Tic40, putative, expressed -
11 Sobic.001G099000 expressed protein -
12 Sobic.002G109000 tetratricopeptide repeat containing protein, putative, expressed -
13 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
14 Sobic.007G015300 calreticulin family protein, expressed -
15 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
16 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
17 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
19 Sobic.004G255500 SET domain-containing protein, putative, expressed -
20 Sobic.007G101300 expressed protein -


Gene co-expression network
sample Sobic003G045300 Sobic003G045300 Sobic003G128400 Sobic003G128400 Sobic003G045300--Sobic003G128400 Sobic001G375000 Sobic001G375000 Sobic003G045300--Sobic001G375000 Sobic001G003900 Sobic001G003900 Sobic003G045300--Sobic001G003900 Sobic002G181132 Sobic002G181132 Sobic003G045300--Sobic002G181132 Sobic009G092900 Sobic009G092900 Sobic003G045300--Sobic009G092900 Sobic004G003900 Sobic004G003900 Sobic003G045300--Sobic004G003900 Sobic005G184300 Sobic005G184300 Sobic003G045300--Sobic005G184300 Sobic003G162800 Sobic003G162800 Sobic003G045300--Sobic003G162800 Sobic008G090900 Sobic008G090900 Sobic003G045300--Sobic008G090900 Sobic003G128400--Sobic001G375000 Sobic007G101300 Sobic007G101300 Sobic003G128400--Sobic007G101300 Sobic003G128400--Sobic003G045300 Sobic003G128400--Sobic005G184300 Sobic003G128400--Sobic004G003900 Sobic006G055800 Sobic006G055800 Sobic003G128400--Sobic006G055800 Sobic002G156100 Sobic002G156100 Sobic003G128400--Sobic002G156100 Sobic002G297400 Sobic002G297400 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic001G375000--Sobic003G128400 Sobic001G375000--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic001G375000--Sobic006G088000 Sobic001G375000--Sobic004G003900 Sobic001G375000--Sobic003G045300 Sobic010G027200 Sobic010G027200 Sobic001G375000--Sobic010G027200 Sobic001G448600 Sobic001G448600 Sobic001G375000--Sobic001G448600 Sobic006G237100 Sobic006G237100 Sobic001G375000--Sobic006G237100 Sobic001G375000--Sobic002G156100 Sobic001G003900--Sobic005G184300 Sobic001G003900--Sobic003G045300 Sobic001G099000 Sobic001G099000 Sobic001G003900--Sobic001G099000 Sobic001G003900--Sobic001G375000 Sobic001G382800 Sobic001G382800 Sobic001G003900--Sobic001G382800 Sobic001G003900--Sobic003G128400 Sobic007G015300 Sobic007G015300 Sobic001G003900--Sobic007G015300 Sobic001G003900--Sobic004G003900 Sobic001G003900--Sobic010G027200 Sobic006G166500 Sobic006G166500 Sobic002G181132--Sobic006G166500 Sobic002G181132--Sobic003G045300 Sobic002G181132--Sobic004G003900 Sobic002G181132--Sobic001G375000 Sobic002G181132--Sobic003G162800 Sobic002G181132--Sobic008G090900 Sobic002G181132--Sobic009G092900 Sobic003G345900 Sobic003G345900 Sobic002G181132--Sobic003G345900 Sobic002G181132--Sobic002G156100 Sobic009G092900--Sobic004G003900 Sobic009G092900--Sobic008G090900 Sobic009G092900--Sobic003G045300 Sobic009G092900--Sobic002G181132 Sobic005G117300 Sobic005G117300 Sobic009G092900--Sobic005G117300 Sobic004G079800 Sobic004G079800 Sobic009G092900--Sobic004G079800 Sobic009G092900--Sobic003G128400 Sobic009G092900--Sobic001G375000 Sobic001G346600 Sobic001G346600 Sobic009G092900--Sobic001G346600 Sobic004G003900--Sobic001G375000 Sobic004G003900--Sobic008G090900 Sobic004G003900--Sobic003G128400 Sobic004G003900--Sobic009G092900 Sobic004G003900--Sobic002G181132 Sobic004G003900--Sobic003G045300 Sobic004G003900--Sobic003G162800 Sobic004G003900--Sobic006G088000 Sobic004G003900--Sobic001G003900 Sobic005G184300--Sobic001G099000 Sobic005G184300--Sobic007G101300 Sobic005G184300--Sobic003G128400 Sobic002G158800 Sobic002G158800 Sobic005G184300--Sobic002G158800 Sobic005G184300--Sobic001G003900 Sobic005G184300--Sobic002G297400 Sobic002G081500 Sobic002G081500 Sobic005G184300--Sobic002G081500 Sobic005G184300--Sobic006G055800 Sobic005G110481 Sobic005G110481 Sobic005G184300--Sobic005G110481 Sobic003G162800--Sobic001G375000 Sobic003G327200 Sobic003G327200 Sobic003G162800--Sobic003G327200 Sobic003G162800--Sobic002G156100 Sobic003G162800--Sobic003G345900 Sobic003G162800--Sobic002G181132 Sobic003G162800--Sobic004G003900 Sobic003G162800--Sobic003G045300 Sobic001G514100 Sobic001G514100 Sobic003G162800--Sobic001G514100 Sobic003G162800--Sobic010G027200 Sobic008G090900--Sobic004G003900 Sobic008G090900--Sobic009G092900 Sobic008G090900--Sobic002G181132 Sobic008G090900--Sobic001G382800 Sobic008G067100 Sobic008G067100 Sobic008G090900--Sobic008G067100 Sobic008G090900--Sobic003G045300 Sobic008G090900--Sobic001G375000 Sobic008G090900--Sobic003G128400 Sobic008G090900--Sobic006G088000
Octagon: transcription factors


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