Gene annotation
Transcriptome id Sobic.010G027200.2,Sobic.010G027200.1
Synonym CLPR2, NCLPP2, Sb10g002480, CLP2
Functional annotation OsClp9 - Putative Clp protease homologue, expressed
UniProt A0A194YGY8 , A0A120GUP7 , A0A194YH16 , A1E9U9
Pfam PF00574
Panther DB PTHR10381 PTHR10381:SF15
NCBI CDD KOG0840; ATP-dependent Clp protease, proteolytic subunit
KEGG Orthology K01358; clpP, ATP-dependent Clp protease, protease subunit
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G12410 : CLP protease proteolytic subunit 2
RAP-DB (Rice) LOC_Os06g04530.1 : OsClp9 - Putative Clp protease homologue, expressed
MaizeGDB (Corn) Zm00025a050113
Brachypodium KQK19956
Barley HORVU5Hr1G035690.1 , HORVU6Hr1G073400.1 , HORVU5Hr1G042010.2 , HORVU5Hr1G042010.1 , HORVU7Hr1G017670.8 , HORVU7Hr1G017670.9 , HORVU7Hr1G017670.2 , HORVU7Hr1G017670.3 , HORVU7Hr1G017670.1 , HORVU7Hr1G017670.6 , HORVU7Hr1G017670.7 , HORVU7Hr1G017670.4 , HORVU7Hr1G017670.5
Wheat TraesCS7A02G076400 , TraesCS7A02G076400 , TraesCS4A02G374600 , TraesCS4A02G374600 , TraesCS7D02G072100 , TraesCS4A02G374600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
2 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
3 Sobic.001G099000 expressed protein -
4 Sobic.007G116100 thioredoxin, putative, expressed -
5 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
6 Sobic.007G015300 calreticulin family protein, expressed -
7 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
8 Sobic.004G338300 rho termination factor, N-terminal domain containing protein, expressed -
9 Sobic.009G104700 prenyltransferase, putative, expressed K04040: chlG, chlorophyll/bacteriochlorophyll a synthase
10 Sobic.003G373300 DNA polymerase I, putative, expressed -
11 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
12 Sobic.003G162800 expressed protein -
13 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
14 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
15 Sobic.007G101300 expressed protein -
16 Sobic.004G255500 SET domain-containing protein, putative, expressed -
17 Sobic.001G003900 pentatricopeptide, putative, expressed -
18 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
19 Sobic.005G022800 GTP binding protein, putative, expressed -
20 Sobic.009G251000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SET domain containing protein, expressed -


Gene co-expression network
sample Sobic010G027200 Sobic010G027200 Sobic002G140000 Sobic002G140000 Sobic010G027200--Sobic002G140000 Sobic001G375000 Sobic001G375000 Sobic010G027200--Sobic001G375000 Sobic001G099000 Sobic001G099000 Sobic010G027200--Sobic001G099000 Sobic007G116100 Sobic007G116100 Sobic010G027200--Sobic007G116100 Sobic006G237100 Sobic006G237100 Sobic010G027200--Sobic006G237100 Sobic007G015300 Sobic007G015300 Sobic010G027200--Sobic007G015300 Sobic005G184300 Sobic005G184300 Sobic010G027200--Sobic005G184300 Sobic004G338300 Sobic004G338300 Sobic010G027200--Sobic004G338300 Sobic009G104700 Sobic009G104700 Sobic010G027200--Sobic009G104700 Sobic002G140000--Sobic010G027200 Sobic002G140000--Sobic007G116100 Sobic002G140000--Sobic007G015300 Sobic005G022800 Sobic005G022800 Sobic002G140000--Sobic005G022800 Sobic002G140000--Sobic006G237100 Sobic006G263800 Sobic006G263800 Sobic002G140000--Sobic006G263800 Sobic002G140000--Sobic001G099000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400 Sobic003G128400 Sobic003G128400 Sobic001G375000--Sobic003G128400 Sobic003G162800 Sobic003G162800 Sobic001G375000--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic001G375000--Sobic006G088000 Sobic004G003900 Sobic004G003900 Sobic001G375000--Sobic004G003900 Sobic003G045300 Sobic003G045300 Sobic001G375000--Sobic003G045300 Sobic001G375000--Sobic010G027200 Sobic001G448600 Sobic001G448600 Sobic001G375000--Sobic001G448600 Sobic001G375000--Sobic006G237100 Sobic002G156100 Sobic002G156100 Sobic001G375000--Sobic002G156100 Sobic002G158800 Sobic002G158800 Sobic001G099000--Sobic002G158800 Sobic001G099000--Sobic005G184300 Sobic001G099000--Sobic007G015300 Sobic002G081500 Sobic002G081500 Sobic001G099000--Sobic002G081500 Sobic004G255500 Sobic004G255500 Sobic001G099000--Sobic004G255500 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic003G373300 Sobic003G373300 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic007G116100--Sobic010G027200 Sobic001G281500 Sobic001G281500 Sobic007G116100--Sobic001G281500 Sobic007G116100--Sobic002G140000 Sobic007G116100--Sobic006G263800 Sobic007G116100--Sobic001G099000 Sobic007G116100--Sobic007G015300 Sobic007G116100--Sobic006G237100 Sobic007G116100--Sobic004G338300 Sobic007G116100--Sobic005G022800 Sobic006G237100--Sobic001G281500 Sobic006G237100--Sobic010G027200 Sobic006G237100--Sobic001G375000 Sobic002G404900 Sobic002G404900 Sobic006G237100--Sobic002G404900 Sobic006G237100--Sobic002G140000 Sobic001G161400 Sobic001G161400 Sobic006G237100--Sobic001G161400 Sobic001G437200 Sobic001G437200 Sobic006G237100--Sobic001G437200 Sobic006G237100--Sobic007G116100 Sobic003G310100 Sobic003G310100 Sobic006G237100--Sobic003G310100 Sobic007G015300--Sobic001G099000 Sobic007G015300--Sobic002G158800 Sobic007G015300--Sobic004G338300 Sobic007G015300--Sobic010G027200 Sobic007G015300--Sobic002G140000 Sobic007G015300--Sobic005G184300 Sobic007G015300--Sobic001G375000 Sobic007G015300--Sobic007G116100 Sobic007G015300--Sobic003G128400 Sobic005G184300--Sobic001G099000 Sobic007G101300 Sobic007G101300 Sobic005G184300--Sobic007G101300 Sobic005G184300--Sobic003G128400 Sobic005G184300--Sobic002G158800 Sobic001G003900 Sobic001G003900 Sobic005G184300--Sobic001G003900 Sobic002G297400 Sobic002G297400 Sobic005G184300--Sobic002G297400 Sobic005G184300--Sobic002G081500 Sobic006G055800 Sobic006G055800 Sobic005G184300--Sobic006G055800 Sobic005G110481 Sobic005G110481 Sobic005G184300--Sobic005G110481 Sobic004G338300--Sobic002G158800 Sobic004G338300--Sobic007G015300 Sobic004G338300--Sobic001G099000 Sobic004G338300--Sobic010G027200 Sobic004G338300--Sobic007G116100 Sobic010G035200 Sobic010G035200 Sobic004G338300--Sobic010G035200 Sobic004G338300--Sobic009G104700 Sobic010G011200 Sobic010G011200 Sobic004G338300--Sobic010G011200 Sobic002G013700 Sobic002G013700 Sobic004G338300--Sobic002G013700 Sobic009G104700--Sobic005G110481 Sobic009G104700--Sobic002G158800 Sobic009G104700--Sobic007G101300 Sobic009G104700--Sobic010G011200 Sobic009G104700--Sobic002G013700 Sobic009G104700--Sobic005G184300 Sobic003G444500 Sobic003G444500 Sobic009G104700--Sobic003G444500 Sobic009G104700--Sobic003G128400 Sobic009G104700--Sobic003G373300
Octagon: transcription factors


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