Gene annotation
Transcriptome id Sobic.009G104700.2
Synonym CHLG, Sb09g016840, G4, ATG4
Functional annotation prenyltransferase, putative, expressed
UniProt A0A1Z5R2Z3
Pfam PF01040
Panther DB PTHR11048 PTHR11048:SF18
NCBI CDD -
KEGG Orthology K04040; chlG, chlorophyll/bacteriochlorophyll a synthase
Gene Ontology GO:0016021; integral component of membrane GO:0004659prenyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G51820 : UbiA prenyltransferase family protein
RAP-DB (Rice) LOC_Os05g28200.1 : prenyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a043441
Brachypodium PNT71498 , KQK06777 , KQK06776
Barley HORVU1Hr1G059890.4 , HORVU1Hr1G059890.2 , HORVU1Hr1G059890.3 , HORVU1Hr1G059890.1
Wheat TraesCS1A02G224700 , TraesCS1D02G226100 , TraesCS1B02G237700 , TraesCS1B02G237700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110481 - -
2 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
3 Sobic.007G101300 expressed protein -
4 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
5 Sobic.002G013700 PPR2, putative, expressed -
6 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
7 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
8 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
9 Sobic.003G373300 DNA polymerase I, putative, expressed -
10 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
11 Sobic.001G099000 expressed protein -
12 Sobic.009G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsDegp6 - Putative Deg protease homologue, expressed -
13 Sobic.001G391400 S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
14 Sobic.001G148200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@antitermination NusB domain-containing protein, putative, expressed -
15 Sobic.009G251000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SET domain containing protein, expressed -
16 Sobic.004G338300 rho termination factor, N-terminal domain containing protein, expressed -
17 Sobic.002G251400 expressed protein -
18 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
19 Sobic.003G383500 rhodanese-like, putative, expressed -
20 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic009G104700 Sobic009G104700 Sobic005G110481 Sobic005G110481 Sobic009G104700--Sobic005G110481 Sobic002G158800 Sobic002G158800 Sobic009G104700--Sobic002G158800 Sobic007G101300 Sobic007G101300 Sobic009G104700--Sobic007G101300 Sobic010G011200 Sobic010G011200 Sobic009G104700--Sobic010G011200 Sobic002G013700 Sobic002G013700 Sobic009G104700--Sobic002G013700 Sobic005G184300 Sobic005G184300 Sobic009G104700--Sobic005G184300 Sobic003G444500 Sobic003G444500 Sobic009G104700--Sobic003G444500 Sobic003G128400 Sobic003G128400 Sobic009G104700--Sobic003G128400 Sobic003G373300 Sobic003G373300 Sobic009G104700--Sobic003G373300 Sobic005G110481--Sobic010G011200 Sobic001G148200 Sobic001G148200 Sobic005G110481--Sobic001G148200 Sobic007G171800 Sobic007G171800 Sobic005G110481--Sobic007G171800 Sobic009G042200 Sobic009G042200 Sobic005G110481--Sobic009G042200 Sobic005G110481--Sobic007G101300 Sobic005G110481--Sobic009G104700 Sobic007G013400 Sobic007G013400 Sobic005G110481--Sobic007G013400 Sobic005G110481--Sobic002G013700 Sobic002G251400 Sobic002G251400 Sobic005G110481--Sobic002G251400 Sobic001G099000 Sobic001G099000 Sobic002G158800--Sobic001G099000 Sobic001G391400 Sobic001G391400 Sobic002G158800--Sobic001G391400 Sobic003G324700 Sobic003G324700 Sobic002G158800--Sobic003G324700 Sobic007G015300 Sobic007G015300 Sobic002G158800--Sobic007G015300 Sobic002G158800--Sobic005G110481 Sobic001G122400 Sobic001G122400 Sobic002G158800--Sobic001G122400 Sobic004G338300 Sobic004G338300 Sobic002G158800--Sobic004G338300 Sobic002G158800--Sobic005G184300 Sobic002G158800--Sobic009G104700 Sobic007G101300--Sobic005G184300 Sobic007G101300--Sobic005G110481 Sobic007G101300--Sobic003G128400 Sobic007G101300--Sobic002G013700 Sobic007G101300--Sobic009G104700 Sobic001G375000 Sobic001G375000 Sobic007G101300--Sobic001G375000 Sobic001G281500 Sobic001G281500 Sobic007G101300--Sobic001G281500 Sobic007G101300--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic007G101300--Sobic010G027200 Sobic010G011200--Sobic005G110481 Sobic010G011200--Sobic007G171800 Sobic010G012900 Sobic010G012900 Sobic010G011200--Sobic010G012900 Sobic010G011200--Sobic001G148200 Sobic010G011200--Sobic002G013700 Sobic009G001500 Sobic009G001500 Sobic010G011200--Sobic009G001500 Sobic001G383900 Sobic001G383900 Sobic010G011200--Sobic001G383900 Sobic010G011200--Sobic009G104700 Sobic009G098100 Sobic009G098100 Sobic010G011200--Sobic009G098100 Sobic002G013700--Sobic005G110481 Sobic002G013700--Sobic007G171800 Sobic002G013700--Sobic010G011200 Sobic002G013700--Sobic007G101300 Sobic002G013700--Sobic002G251400 Sobic002G013700--Sobic009G104700 Sobic002G013700--Sobic002G158800 Sobic002G013700--Sobic001G148200 Sobic002G013700--Sobic009G042200 Sobic005G184300--Sobic001G099000 Sobic005G184300--Sobic007G101300 Sobic005G184300--Sobic003G128400 Sobic005G184300--Sobic002G158800 Sobic001G003900 Sobic001G003900 Sobic005G184300--Sobic001G003900 Sobic002G297400 Sobic002G297400 Sobic005G184300--Sobic002G297400 Sobic002G081500 Sobic002G081500 Sobic005G184300--Sobic002G081500 Sobic006G055800 Sobic006G055800 Sobic005G184300--Sobic006G055800 Sobic005G184300--Sobic005G110481 Sobic003G444500--Sobic001G148200 Sobic003G330100 Sobic003G330100 Sobic003G444500--Sobic003G330100 Sobic004G179200 Sobic004G179200 Sobic003G444500--Sobic004G179200 Sobic003G444500--Sobic002G251400 Sobic003G444500--Sobic009G042200 Sobic003G221700 Sobic003G221700 Sobic003G444500--Sobic003G221700 Sobic003G084500 Sobic003G084500 Sobic003G444500--Sobic003G084500 Sobic002G131700 Sobic002G131700 Sobic003G444500--Sobic002G131700 Sobic004G250200 Sobic004G250200 Sobic003G444500--Sobic004G250200 Sobic003G128400--Sobic001G375000 Sobic003G128400--Sobic007G101300 Sobic003G045300 Sobic003G045300 Sobic003G128400--Sobic003G045300 Sobic003G128400--Sobic005G184300 Sobic004G003900 Sobic004G003900 Sobic003G128400--Sobic004G003900 Sobic003G128400--Sobic006G055800 Sobic002G156100 Sobic002G156100 Sobic003G128400--Sobic002G156100 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic003G373300--Sobic001G099000 Sobic006G166000 Sobic006G166000 Sobic003G373300--Sobic006G166000 Sobic003G373300--Sobic001G391400 Sobic003G373300--Sobic001G383900 Sobic003G373300--Sobic002G158800 Sobic003G373300--Sobic005G110481 Sobic003G373300--Sobic009G104700 Sobic003G373300--Sobic010G027200 Sobic005G022800 Sobic005G022800 Sobic003G373300--Sobic005G022800
Octagon: transcription factors


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