Gene annotation
Transcriptome id Sobic.007G101300.1,Sobic.007G101300.2
Synonym Sb07g012110
Functional annotation expressed protein
UniProt C5YK20 , A0A1Z5R911
Pfam -
Panther DB PTHR36009 PTHR36009:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G04360 : -
RAP-DB (Rice) LOC_Os08g25700.1 : expressed protein
MaizeGDB (Corn) Zm00025a030665
Brachypodium PNT67190 , KQJ96302 , KQJ96303 , KQJ96301
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G101300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
2 Sobic.005G110481 - -
3 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
4 Sobic.002G013700 PPR2, putative, expressed -
5 Sobic.009G104700 prenyltransferase, putative, expressed K04040: chlG, chlorophyll/bacteriochlorophyll a synthase
6 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
7 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
8 Sobic.001G099000 expressed protein -
9 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
11 Sobic.009G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsDegp6 - Putative Deg protease homologue, expressed -
12 Sobic.003G373300 DNA polymerase I, putative, expressed -
13 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
14 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
15 Sobic.001G003900 pentatricopeptide, putative, expressed -
16 Sobic.002G214600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
17 Sobic.007G015300 calreticulin family protein, expressed -
18 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
19 Sobic.003G292300 tRNA synthetase, putative, expressed K01867: WARS, tryptophanyl-tRNA synthetase
20 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic007G101300 Sobic007G101300 Sobic005G184300 Sobic005G184300 Sobic007G101300--Sobic005G184300 Sobic005G110481 Sobic005G110481 Sobic007G101300--Sobic005G110481 Sobic003G128400 Sobic003G128400 Sobic007G101300--Sobic003G128400 Sobic002G013700 Sobic002G013700 Sobic007G101300--Sobic002G013700 Sobic009G104700 Sobic009G104700 Sobic007G101300--Sobic009G104700 Sobic001G375000 Sobic001G375000 Sobic007G101300--Sobic001G375000 Sobic001G281500 Sobic001G281500 Sobic007G101300--Sobic001G281500 Sobic001G099000 Sobic001G099000 Sobic007G101300--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic007G101300--Sobic010G027200 Sobic005G184300--Sobic001G099000 Sobic005G184300--Sobic007G101300 Sobic005G184300--Sobic003G128400 Sobic002G158800 Sobic002G158800 Sobic005G184300--Sobic002G158800 Sobic001G003900 Sobic001G003900 Sobic005G184300--Sobic001G003900 Sobic002G297400 Sobic002G297400 Sobic005G184300--Sobic002G297400 Sobic002G081500 Sobic002G081500 Sobic005G184300--Sobic002G081500 Sobic006G055800 Sobic006G055800 Sobic005G184300--Sobic006G055800 Sobic005G184300--Sobic005G110481 Sobic010G011200 Sobic010G011200 Sobic005G110481--Sobic010G011200 Sobic001G148200 Sobic001G148200 Sobic005G110481--Sobic001G148200 Sobic007G171800 Sobic007G171800 Sobic005G110481--Sobic007G171800 Sobic009G042200 Sobic009G042200 Sobic005G110481--Sobic009G042200 Sobic005G110481--Sobic007G101300 Sobic005G110481--Sobic009G104700 Sobic007G013400 Sobic007G013400 Sobic005G110481--Sobic007G013400 Sobic005G110481--Sobic002G013700 Sobic002G251400 Sobic002G251400 Sobic005G110481--Sobic002G251400 Sobic003G128400--Sobic001G375000 Sobic003G128400--Sobic007G101300 Sobic003G045300 Sobic003G045300 Sobic003G128400--Sobic003G045300 Sobic003G128400--Sobic005G184300 Sobic004G003900 Sobic004G003900 Sobic003G128400--Sobic004G003900 Sobic003G128400--Sobic006G055800 Sobic002G156100 Sobic002G156100 Sobic003G128400--Sobic002G156100 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic002G013700--Sobic005G110481 Sobic002G013700--Sobic007G171800 Sobic002G013700--Sobic010G011200 Sobic002G013700--Sobic007G101300 Sobic002G013700--Sobic002G251400 Sobic002G013700--Sobic009G104700 Sobic002G013700--Sobic002G158800 Sobic002G013700--Sobic001G148200 Sobic002G013700--Sobic009G042200 Sobic009G104700--Sobic005G110481 Sobic009G104700--Sobic002G158800 Sobic009G104700--Sobic007G101300 Sobic009G104700--Sobic010G011200 Sobic009G104700--Sobic002G013700 Sobic009G104700--Sobic005G184300 Sobic003G444500 Sobic003G444500 Sobic009G104700--Sobic003G444500 Sobic009G104700--Sobic003G128400 Sobic003G373300 Sobic003G373300 Sobic009G104700--Sobic003G373300 Sobic001G375000--Sobic003G128400 Sobic003G162800 Sobic003G162800 Sobic001G375000--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic001G375000--Sobic006G088000 Sobic001G375000--Sobic004G003900 Sobic001G375000--Sobic003G045300 Sobic001G375000--Sobic010G027200 Sobic001G448600 Sobic001G448600 Sobic001G375000--Sobic001G448600 Sobic006G237100 Sobic006G237100 Sobic001G375000--Sobic006G237100 Sobic001G375000--Sobic002G156100 Sobic001G281500--Sobic006G237100 Sobic007G116100 Sobic007G116100 Sobic001G281500--Sobic007G116100 Sobic006G107600 Sobic006G107600 Sobic001G281500--Sobic006G107600 Sobic001G281500--Sobic001G099000 Sobic001G281500--Sobic001G375000 Sobic001G281500--Sobic007G171800 Sobic006G263800 Sobic006G263800 Sobic001G281500--Sobic006G263800 Sobic001G281500--Sobic010G027200 Sobic001G281500--Sobic005G184300 Sobic001G099000--Sobic002G158800 Sobic001G099000--Sobic005G184300 Sobic007G015300 Sobic007G015300 Sobic001G099000--Sobic007G015300 Sobic001G099000--Sobic002G081500 Sobic004G255500 Sobic004G255500 Sobic001G099000--Sobic004G255500 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic002G140000 Sobic002G140000 Sobic010G027200--Sobic002G140000 Sobic010G027200--Sobic001G375000 Sobic010G027200--Sobic001G099000 Sobic010G027200--Sobic007G116100 Sobic010G027200--Sobic006G237100 Sobic010G027200--Sobic007G015300 Sobic010G027200--Sobic005G184300 Sobic004G338300 Sobic004G338300 Sobic010G027200--Sobic004G338300 Sobic010G027200--Sobic009G104700
Octagon: transcription factors


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