Gene annotation
Transcriptome id Sobic.002G214600.1
Synonym CHCPN10, CPN20, ATCPN21, CPN21, Sb02g025700, CPN10
Functional annotation chaperonin, putative, expressed
UniProt C5XDP0
Pfam PF00166
Panther DB PTHR10772 PTHR10772:SF11
NCBI CDD KOG1641; Mitochondrial chaperonin
KEGG Orthology K04078; groES, chaperonin GroES
Gene Ontology GO:0006457; protein folding GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT5G20720 : chaperonin 20
RAP-DB (Rice) LOC_Os09g26730.1 : chaperonin, putative, expressed
MaizeGDB (Corn) Zm00025a049673 , Zm00025a013979
Brachypodium KQJ90392 , KQJ90391
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G214600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
2 Sobic.007G101300 expressed protein -
3 Sobic.004G335800 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
4 Sobic.002G013700 PPR2, putative, expressed -
5 Sobic.003G324700 expressed protein -
6 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
7 Sobic.005G110481 - -
8 Sobic.007G143700 immunophilin(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
9 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
10 Sobic.006G107600 plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed K19032: 30S ribosomal protein 3
11 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
12 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
13 Sobic.004G116100 50S ribosomal protein L21, chloroplast precursor, putative, expressed K02888: RP-L21, MRPL21, large subunit ribosomal protein L21
14 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
15 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
16 Sobic.001G040000 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
17 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
18 Sobic.009G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsDegp6 - Putative Deg protease homologue, expressed -
19 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
20 Sobic.002G081500 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)


Gene co-expression network
sample Sobic002G214600 Sobic002G214600 Sobic002G152800 Sobic002G152800 Sobic002G214600--Sobic002G152800 Sobic007G101300 Sobic007G101300 Sobic002G214600--Sobic007G101300 Sobic004G335800 Sobic004G335800 Sobic002G214600--Sobic004G335800 Sobic002G013700 Sobic002G013700 Sobic002G214600--Sobic002G013700 Sobic003G324700 Sobic003G324700 Sobic002G214600--Sobic003G324700 Sobic003G432500 Sobic003G432500 Sobic002G214600--Sobic003G432500 Sobic005G110481 Sobic005G110481 Sobic002G214600--Sobic005G110481 Sobic007G143700 Sobic007G143700 Sobic002G214600--Sobic007G143700 Sobic001G469933 Sobic001G469933 Sobic002G214600--Sobic001G469933 Sobic002G152800--Sobic003G324700 Sobic002G152800--Sobic004G335800 Sobic006G055800 Sobic006G055800 Sobic002G152800--Sobic006G055800 Sobic002G152800--Sobic001G469933 Sobic001G368500 Sobic001G368500 Sobic002G152800--Sobic001G368500 Sobic002G152800--Sobic003G432500 Sobic007G090400 Sobic007G090400 Sobic002G152800--Sobic007G090400 Sobic002G152800--Sobic002G214600 Sobic001G122400 Sobic001G122400 Sobic002G152800--Sobic001G122400 Sobic005G184300 Sobic005G184300 Sobic007G101300--Sobic005G184300 Sobic007G101300--Sobic005G110481 Sobic003G128400 Sobic003G128400 Sobic007G101300--Sobic003G128400 Sobic007G101300--Sobic002G013700 Sobic009G104700 Sobic009G104700 Sobic007G101300--Sobic009G104700 Sobic001G375000 Sobic001G375000 Sobic007G101300--Sobic001G375000 Sobic001G281500 Sobic001G281500 Sobic007G101300--Sobic001G281500 Sobic001G099000 Sobic001G099000 Sobic007G101300--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic007G101300--Sobic010G027200 Sobic001G040000 Sobic001G040000 Sobic004G335800--Sobic001G040000 Sobic004G335800--Sobic001G122400 Sobic003G386300 Sobic003G386300 Sobic004G335800--Sobic003G386300 Sobic001G527100 Sobic001G527100 Sobic004G335800--Sobic001G527100 Sobic004G116100 Sobic004G116100 Sobic004G335800--Sobic004G116100 Sobic004G335800--Sobic003G324700 Sobic004G335800--Sobic007G143700 Sobic001G391400 Sobic001G391400 Sobic004G335800--Sobic001G391400 Sobic001G240000 Sobic001G240000 Sobic004G335800--Sobic001G240000 Sobic002G013700--Sobic005G110481 Sobic007G171800 Sobic007G171800 Sobic002G013700--Sobic007G171800 Sobic010G011200 Sobic010G011200 Sobic002G013700--Sobic010G011200 Sobic002G013700--Sobic007G101300 Sobic002G251400 Sobic002G251400 Sobic002G013700--Sobic002G251400 Sobic002G013700--Sobic009G104700 Sobic002G158800 Sobic002G158800 Sobic002G013700--Sobic002G158800 Sobic001G148200 Sobic001G148200 Sobic002G013700--Sobic001G148200 Sobic009G042200 Sobic009G042200 Sobic002G013700--Sobic009G042200 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic003G324700--Sobic002G152800 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic003G324700--Sobic001G527100 Sobic003G432500--Sobic001G368500 Sobic003G432500--Sobic006G055800 Sobic003G432500--Sobic001G469933 Sobic003G271900 Sobic003G271900 Sobic003G432500--Sobic003G271900 Sobic005G110400 Sobic005G110400 Sobic003G432500--Sobic005G110400 Sobic003G432500--Sobic003G324700 Sobic008G073100 Sobic008G073100 Sobic003G432500--Sobic008G073100 Sobic004G336000 Sobic004G336000 Sobic003G432500--Sobic004G336000 Sobic003G432500--Sobic002G152800 Sobic005G110481--Sobic010G011200 Sobic005G110481--Sobic001G148200 Sobic005G110481--Sobic007G171800 Sobic005G110481--Sobic009G042200 Sobic005G110481--Sobic007G101300 Sobic005G110481--Sobic009G104700 Sobic007G013400 Sobic007G013400 Sobic005G110481--Sobic007G013400 Sobic005G110481--Sobic002G013700 Sobic005G110481--Sobic002G251400 Sobic007G143700--Sobic004G335800 Sobic004G311100 Sobic004G311100 Sobic007G143700--Sobic004G311100 Sobic004G054500 Sobic004G054500 Sobic007G143700--Sobic004G054500 Sobic001G415400 Sobic001G415400 Sobic007G143700--Sobic001G415400 Sobic007G143700--Sobic003G386300 Sobic007G143700--Sobic001G122400 Sobic007G143700--Sobic004G116100 Sobic003G157400 Sobic003G157400 Sobic007G143700--Sobic003G157400 Sobic008G112300 Sobic008G112300 Sobic007G143700--Sobic008G112300 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic001G469933--Sobic003G324700 Sobic003G077400 Sobic003G077400 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic001G469933--Sobic003G432500 Sobic001G469933--Sobic004G335800 Sobic001G083100 Sobic001G083100 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400
Octagon: transcription factors


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