Gene annotation
Transcriptome id Sobic.002G081500.5,Sobic.002G081500.4,Sobic.002G081500.3,Sobic.002G081500.1,Sobic.002G081500.2
Synonym SFD1, Sb02g006800, GLY1
Functional annotation glycerol-3-phosphate dehydrogenase, putative, expressed
UniProt C5XDG4 , A0A1W0W2Y9 , A0A1W0W2W8 , A0A1B6Q9X1 , A0A1W0W2T7
Pfam PF02558 PF02558 PF07479 PF01210 PF07479
Panther DB PTHR11728 PTHR11728:SF13
NCBI CDD KOG2711; Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase
KEGG Orthology K00006; glycerol-3-phosphate dehydrogenase (NAD+)
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0005975carbohydrate metabolic process GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity GO:0009331glycerol-3-phosphate dehydrogenase complex GO:0006072glycerol-3-phosphate metabolic process GO:00086772-dehydropantoate 2-reductase activity GO:0005975carbohydrate metabolic process GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity GO:0009331glycerol-3-phosphate dehydrogenase complex GO:0006072glycerol-3-phosphate metabolic process GO:00086772-dehydropantoate 2-reductase activity GO:0009331glycerol-3-phosphate dehydrogenase complex GO:0006072glycerol-3-phosphate metabolic process GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity


Orthologs (automatic annotation)
TAIR AT2G40690 : NAD-dependent glycerol-3-phosphate dehydrogenase family protein
RAP-DB (Rice) LOC_Os07g12640.1 : glycerol-3-phosphate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a045439
Brachypodium KQK20311 , KQK20312
Barley HORVU4Hr1G075040.8 , HORVU4Hr1G075040.9 , HORVU4Hr1G075040.2 , HORVU4Hr1G075040.1 , HORVU4Hr1G075040.6 , HORVU4Hr1G075040.7 , HORVU4Hr1G075040.4 , HORVU4Hr1G075040.5 , HORVU4Hr1G075040.29 , HORVU4Hr1G075040.18 , HORVU4Hr1G075040.19 , HORVU4Hr1G075040.10 , HORVU4Hr1G075040.11 , HORVU4Hr1G075040.12 , HORVU4Hr1G075040.22 , HORVU4Hr1G075040.14 , HORVU4Hr1G075040.15 , HORVU4Hr1G075040.16 , HORVU4Hr1G075040.17 , HORVU4Hr1G075040.3 , HORVU4Hr1G075040.34 , HORVU4Hr1G075040.28 , HORVU4Hr1G075040.25 , HORVU4Hr1G075040.24 , HORVU4Hr1G075040.27 , HORVU4Hr1G075040.26 , HORVU4Hr1G075040.21 , HORVU4Hr1G075040.20 , HORVU4Hr1G075040.23 , HORVU4Hr1G075040.30 , HORVU4Hr1G075040.31 , HORVU4Hr1G075040.32 , HORVU4Hr1G075040.13
Wheat TraesCS4A02G017300 , TraesCS4A02G017300 , TraesCS4B02G286700 , TraesCS4B02G286700 , TraesCS4D02G285400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G099000 expressed protein -
2 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
3 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
4 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
5 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
7 Sobic.004G020800 dimethyladenosine transferase, putative, expressed -
8 Sobic.001G037500 expressed protein -
9 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
10 Sobic.003G439000 rubredoxin family protein, putative, expressed -
11 Sobic.002G109000 tetratricopeptide repeat containing protein, putative, expressed -
12 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
13 Sobic.006G273400 pentatricopeptide repeat protein, putative, expressed -
14 Sobic.003G324700 expressed protein -
15 Sobic.007G015300 calreticulin family protein, expressed -
16 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
17 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
18 Sobic.001G054100 spo0B-associated GTP-binding protein, putative, expressed -
19 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
20 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -


Gene co-expression network
sample Sobic002G081500 Sobic002G081500 Sobic001G099000 Sobic001G099000 Sobic002G081500--Sobic001G099000 Sobic001G469933 Sobic001G469933 Sobic002G081500--Sobic001G469933 Sobic005G184300 Sobic005G184300 Sobic002G081500--Sobic005G184300 Sobic006G055800 Sobic006G055800 Sobic002G081500--Sobic006G055800 Sobic002G297400 Sobic002G297400 Sobic002G081500--Sobic002G297400 Sobic005G110400 Sobic005G110400 Sobic002G081500--Sobic005G110400 Sobic004G020800 Sobic004G020800 Sobic002G081500--Sobic004G020800 Sobic001G037500 Sobic001G037500 Sobic002G081500--Sobic001G037500 Sobic002G158800 Sobic002G158800 Sobic002G081500--Sobic002G158800 Sobic001G099000--Sobic002G158800 Sobic001G099000--Sobic005G184300 Sobic007G015300 Sobic007G015300 Sobic001G099000--Sobic007G015300 Sobic001G099000--Sobic002G081500 Sobic004G255500 Sobic004G255500 Sobic001G099000--Sobic004G255500 Sobic010G027200 Sobic010G027200 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic003G373300 Sobic003G373300 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic001G122400 Sobic001G122400 Sobic001G469933--Sobic001G122400 Sobic001G368500 Sobic001G368500 Sobic001G469933--Sobic001G368500 Sobic003G324700 Sobic003G324700 Sobic001G469933--Sobic003G324700 Sobic003G077400 Sobic003G077400 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic003G432500 Sobic003G432500 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G083100 Sobic001G083100 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic005G184300--Sobic001G099000 Sobic007G101300 Sobic007G101300 Sobic005G184300--Sobic007G101300 Sobic003G128400 Sobic003G128400 Sobic005G184300--Sobic003G128400 Sobic005G184300--Sobic002G158800 Sobic001G003900 Sobic001G003900 Sobic005G184300--Sobic001G003900 Sobic005G184300--Sobic002G297400 Sobic005G184300--Sobic002G081500 Sobic005G184300--Sobic006G055800 Sobic005G110481 Sobic005G110481 Sobic005G184300--Sobic005G110481 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic005G002900 Sobic005G002900 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic006G055800--Sobic001G083100 Sobic006G055800--Sobic005G110400 Sobic004G179200 Sobic004G179200 Sobic002G297400--Sobic004G179200 Sobic002G297400--Sobic006G055800 Sobic002G297400--Sobic001G469933 Sobic006G256600 Sobic006G256600 Sobic002G297400--Sobic006G256600 Sobic002G297400--Sobic001G122400 Sobic002G297400--Sobic005G184300 Sobic002G297400--Sobic003G324700 Sobic003G439000 Sobic003G439000 Sobic002G297400--Sobic003G439000 Sobic006G107600 Sobic006G107600 Sobic002G297400--Sobic006G107600 Sobic008G073100 Sobic008G073100 Sobic005G110400--Sobic008G073100 Sobic005G110400--Sobic001G368500 Sobic001G126300 Sobic001G126300 Sobic005G110400--Sobic001G126300 Sobic002G401800 Sobic002G401800 Sobic005G110400--Sobic002G401800 Sobic004G336200 Sobic004G336200 Sobic005G110400--Sobic004G336200 Sobic003G387100 Sobic003G387100 Sobic005G110400--Sobic003G387100 Sobic005G143500 Sobic005G143500 Sobic005G110400--Sobic005G143500 Sobic005G110400--Sobic003G077400 Sobic005G110400--Sobic003G432500 Sobic004G020800--Sobic002G081500 Sobic004G020800--Sobic001G037500 Sobic002G042500 Sobic002G042500 Sobic004G020800--Sobic002G042500 Sobic004G020800--Sobic003G128400 Sobic002G296100 Sobic002G296100 Sobic004G020800--Sobic002G296100 Sobic003G150800 Sobic003G150800 Sobic004G020800--Sobic003G150800 Sobic001G054100 Sobic001G054100 Sobic004G020800--Sobic001G054100 Sobic007G185700 Sobic007G185700 Sobic004G020800--Sobic007G185700 Sobic004G225600 Sobic004G225600 Sobic004G020800--Sobic004G225600 Sobic001G037500--Sobic002G042500 Sobic001G037500--Sobic001G054100 Sobic006G273400 Sobic006G273400 Sobic001G037500--Sobic006G273400 Sobic001G037500--Sobic003G150800 Sobic005G111550 Sobic005G111550 Sobic001G037500--Sobic005G111550 Sobic004G206200 Sobic004G206200 Sobic001G037500--Sobic004G206200 Sobic001G037500--Sobic002G081500 Sobic003G372900 Sobic003G372900 Sobic001G037500--Sobic003G372900 Sobic001G037500--Sobic002G296100 Sobic002G158800--Sobic001G099000 Sobic001G391400 Sobic001G391400 Sobic002G158800--Sobic001G391400 Sobic002G158800--Sobic003G324700 Sobic002G158800--Sobic007G015300 Sobic002G158800--Sobic005G110481 Sobic002G158800--Sobic001G122400 Sobic004G338300 Sobic004G338300 Sobic002G158800--Sobic004G338300 Sobic002G158800--Sobic005G184300 Sobic009G104700 Sobic009G104700 Sobic002G158800--Sobic009G104700
Octagon: transcription factors


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