Gene annotation
Transcriptome id Sobic.004G020800.5,Sobic.004G020800.4,Sobic.004G020800.1,Sobic.004G020800.3,Sobic.004G020800.2,Sobic.004G020800.6
Synonym Sb04g001913, PFC1
Functional annotation dimethyladenosine transferase, putative, expressed
UniProt A0A1Z5RKI7 , D8L800
Pfam PF12847
Panther DB PTHR11727 PTHR11727:SF11
NCBI CDD KOG0820; Ribosomal RNA adenine dimethylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01860 : Ribosomal RNA adenine dimethylase family protein
RAP-DB (Rice) LOC_Os02g03050.1 : dimethyladenosine transferase, putative, expressed
MaizeGDB (Corn) Zm00025a034940
Brachypodium PNT65763 , KQJ93015 , KQJ93017 , KQJ93016
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G081500 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
2 Sobic.001G037500 expressed protein -
3 Sobic.002G042500 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
4 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
5 Sobic.002G296100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
6 Sobic.003G150800 preprotein translocase subunit secA, chloroplast precursor, putative, expressed K03070: preprotein translocase subunit SecA
7 Sobic.001G054100 spo0B-associated GTP-binding protein, putative, expressed -
8 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
9 Sobic.004G225600 - -
10 Sobic.003G045300 cobalt ion transporter, putative, expressed -
11 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
12 Sobic.007G101300 expressed protein -
13 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
14 Sobic.004G206200 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
15 Sobic.001G099000 expressed protein -
16 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
17 Sobic.003G085100 MYB family transcription factor, putative, expressed -
18 Sobic.005G197300 GTP-binding protein, putative, expressed K03977: engA, GTPase
19 Sobic.003G327200 GHMP kinases ATP-binding protein, putative, expressed K00919: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
20 Sobic.007G015300 calreticulin family protein, expressed -


Gene co-expression network
sample Sobic004G020800 Sobic004G020800 Sobic002G081500 Sobic002G081500 Sobic004G020800--Sobic002G081500 Sobic001G037500 Sobic001G037500 Sobic004G020800--Sobic001G037500 Sobic002G042500 Sobic002G042500 Sobic004G020800--Sobic002G042500 Sobic003G128400 Sobic003G128400 Sobic004G020800--Sobic003G128400 Sobic002G296100 Sobic002G296100 Sobic004G020800--Sobic002G296100 Sobic003G150800 Sobic003G150800 Sobic004G020800--Sobic003G150800 Sobic001G054100 Sobic001G054100 Sobic004G020800--Sobic001G054100 Sobic007G185700 Sobic007G185700 Sobic004G020800--Sobic007G185700 Sobic004G225600 Sobic004G225600 Sobic004G020800--Sobic004G225600 Sobic001G099000 Sobic001G099000 Sobic002G081500--Sobic001G099000 Sobic001G469933 Sobic001G469933 Sobic002G081500--Sobic001G469933 Sobic005G184300 Sobic005G184300 Sobic002G081500--Sobic005G184300 Sobic006G055800 Sobic006G055800 Sobic002G081500--Sobic006G055800 Sobic002G297400 Sobic002G297400 Sobic002G081500--Sobic002G297400 Sobic005G110400 Sobic005G110400 Sobic002G081500--Sobic005G110400 Sobic002G081500--Sobic004G020800 Sobic002G081500--Sobic001G037500 Sobic002G158800 Sobic002G158800 Sobic002G081500--Sobic002G158800 Sobic001G037500--Sobic002G042500 Sobic001G037500--Sobic001G054100 Sobic006G273400 Sobic006G273400 Sobic001G037500--Sobic006G273400 Sobic001G037500--Sobic003G150800 Sobic005G111550 Sobic005G111550 Sobic001G037500--Sobic005G111550 Sobic004G206200 Sobic004G206200 Sobic001G037500--Sobic004G206200 Sobic001G037500--Sobic002G081500 Sobic003G372900 Sobic003G372900 Sobic001G037500--Sobic003G372900 Sobic001G037500--Sobic002G296100 Sobic002G042500--Sobic001G037500 Sobic002G042500--Sobic003G150800 Sobic002G042500--Sobic005G111550 Sobic002G042500--Sobic004G206200 Sobic003G085100 Sobic003G085100 Sobic002G042500--Sobic003G085100 Sobic003G141100 Sobic003G141100 Sobic002G042500--Sobic003G141100 Sobic002G042500--Sobic002G296100 Sobic002G042500--Sobic007G185700 Sobic001G126300 Sobic001G126300 Sobic002G042500--Sobic001G126300 Sobic001G375000 Sobic001G375000 Sobic003G128400--Sobic001G375000 Sobic007G101300 Sobic007G101300 Sobic003G128400--Sobic007G101300 Sobic003G045300 Sobic003G045300 Sobic003G128400--Sobic003G045300 Sobic003G128400--Sobic005G184300 Sobic004G003900 Sobic004G003900 Sobic003G128400--Sobic004G003900 Sobic003G128400--Sobic006G055800 Sobic002G156100 Sobic002G156100 Sobic003G128400--Sobic002G156100 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic002G296100--Sobic002G042500 Sobic002G296100--Sobic001G037500 Sobic002G347600 Sobic002G347600 Sobic002G296100--Sobic002G347600 Sobic002G296100--Sobic004G020800 Sobic003G434700 Sobic003G434700 Sobic002G296100--Sobic003G434700 Sobic002G296100--Sobic004G206200 Sobic006G128300 Sobic006G128300 Sobic002G296100--Sobic006G128300 Sobic002G296100--Sobic002G081500 Sobic001G022500 Sobic001G022500 Sobic002G296100--Sobic001G022500 Sobic003G150800--Sobic003G085100 Sobic003G150800--Sobic002G042500 Sobic003G150800--Sobic005G111550 Sobic007G005400 Sobic007G005400 Sobic003G150800--Sobic007G005400 Sobic003G150800--Sobic001G037500 Sobic005G063000 Sobic005G063000 Sobic003G150800--Sobic005G063000 Sobic002G314400 Sobic002G314400 Sobic003G150800--Sobic002G314400 Sobic004G328400 Sobic004G328400 Sobic003G150800--Sobic004G328400 Sobic003G150800--Sobic003G141100 Sobic001G028100 Sobic001G028100 Sobic001G054100--Sobic001G028100 Sobic001G054100--Sobic003G372900 Sobic001G083100 Sobic001G083100 Sobic001G054100--Sobic001G083100 Sobic002G181000 Sobic002G181000 Sobic001G054100--Sobic002G181000 Sobic001G054100--Sobic003G141100 Sobic010G002000 Sobic010G002000 Sobic001G054100--Sobic010G002000 Sobic001G054100--Sobic007G185700 Sobic001G054100--Sobic001G037500 Sobic001G054100--Sobic004G328400 Sobic007G185700--Sobic001G054100 Sobic003G234900 Sobic003G234900 Sobic007G185700--Sobic003G234900 Sobic007G185700--Sobic003G141100 Sobic001G500600 Sobic001G500600 Sobic007G185700--Sobic001G500600 Sobic003G217700 Sobic003G217700 Sobic007G185700--Sobic003G217700 Sobic001G530900 Sobic001G530900 Sobic007G185700--Sobic001G530900 Sobic003G352500 Sobic003G352500 Sobic007G185700--Sobic003G352500 Sobic001G261573 Sobic001G261573 Sobic007G185700--Sobic001G261573 Sobic005G231100 Sobic005G231100 Sobic007G185700--Sobic005G231100 Sobic004G225600--Sobic001G022500 Sobic004G208600 Sobic004G208600 Sobic004G225600--Sobic004G208600 Sobic003G162800 Sobic003G162800 Sobic004G225600--Sobic003G162800 Sobic004G225600--Sobic001G099000 Sobic007G095500 Sobic007G095500 Sobic004G225600--Sobic007G095500 Sobic006G058100 Sobic006G058100 Sobic004G225600--Sobic006G058100 Sobic004G225600--Sobic001G375000 Sobic004G225600--Sobic003G434700 Sobic004G225600--Sobic005G184300
Octagon: transcription factors


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