Gene annotation
Transcriptome id Sobic.005G197300.1
Synonym Sb05g025430, emb2738
Functional annotation GTP-binding protein, putative, expressed
UniProt A0A1B6PTL0
Pfam PF14714 PF01926
Panther DB PTHR11649 PTHR11649:SF60
NCBI CDD KOG1191; Mitochondrial GTPase
KEGG Orthology K03977; engA, GTPase
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT3G12080 : GTP-binding family protein
RAP-DB (Rice) LOC_Os11g41910.1 : GTP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a015900
Brachypodium KQJ87601 , KQJ87600 , KQJ87599
Barley HORVU3Hr1G013770.11 , HORVU3Hr1G013770.10 , HORVU3Hr1G013770.9 , HORVU3Hr1G013770.7 , HORVU3Hr1G013770.6 , HORVU3Hr1G013770.5 , HORVU3Hr1G013770.4 , HORVU3Hr1G013770.1 , HORVU3Hr1G013770.13 , HORVU3Hr1G013770.12 , HORVU3Hr1G013770.8 , HORVU3Hr1G013770.3 , HORVU3Hr1G013770.2
Wheat TraesCS4A02G149800 , TraesCS4A02G149800 , TraesCS4D02G085700 , TraesCS4D02G085700 , TraesCS4D02G085700 , TraesCS4D02G085700 , TraesCS4B02G090100 , TraesCS4B02G090100 , TraesCS4B02G090100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G022800 GTP binding protein, putative, expressed -
2 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G099000 expressed protein -
4 Sobic.004G255500 SET domain-containing protein, putative, expressed -
5 Sobic.006G273400 pentatricopeptide repeat protein, putative, expressed -
6 Sobic.004G263200 uncharacterized protein At1g26090, chloroplast precursor, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
7 Sobic.001G022500 tRNA synthetases class II domain containing protein, expressed K04567: KARS, lysyl-tRNA synthetase, class II
8 Sobic.002G209600 CBS domain containing protein, expressed -
9 Sobic.004G225600 - -
10 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
11 Sobic.002G081500 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
12 Sobic.003G162800 expressed protein -
13 Sobic.004G208600 glycine-rich protein, putative, expressed -
14 Sobic.004G246800 pentatricopeptide, putative, expressed -
15 Sobic.003G327200 GHMP kinases ATP-binding protein, putative, expressed K00919: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
16 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.004G020800 dimethyladenosine transferase, putative, expressed -
18 Sobic.007G201400 pentatricopeptide, putative, expressed -
19 Sobic.009G127400 PAC, putative, expressed -
20 Sobic.003G149300 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic005G197300 Sobic005G197300 Sobic005G022800 Sobic005G022800 Sobic005G197300--Sobic005G022800 Sobic001G514100 Sobic001G514100 Sobic005G197300--Sobic001G514100 Sobic001G099000 Sobic001G099000 Sobic005G197300--Sobic001G099000 Sobic004G255500 Sobic004G255500 Sobic005G197300--Sobic004G255500 Sobic006G273400 Sobic006G273400 Sobic005G197300--Sobic006G273400 Sobic004G263200 Sobic004G263200 Sobic005G197300--Sobic004G263200 Sobic001G022500 Sobic001G022500 Sobic005G197300--Sobic001G022500 Sobic002G209600 Sobic002G209600 Sobic005G197300--Sobic002G209600 Sobic004G225600 Sobic004G225600 Sobic005G197300--Sobic004G225600 Sobic002G140000 Sobic002G140000 Sobic005G022800--Sobic002G140000 Sobic006G263800 Sobic006G263800 Sobic005G022800--Sobic006G263800 Sobic005G022800--Sobic004G255500 Sobic003G373300 Sobic003G373300 Sobic005G022800--Sobic003G373300 Sobic005G022800--Sobic005G197300 Sobic005G022800--Sobic001G099000 Sobic007G116100 Sobic007G116100 Sobic005G022800--Sobic007G116100 Sobic010G027200 Sobic010G027200 Sobic005G022800--Sobic010G027200 Sobic008G021700 Sobic008G021700 Sobic005G022800--Sobic008G021700 Sobic003G162800 Sobic003G162800 Sobic001G514100--Sobic003G162800 Sobic001G281500 Sobic001G281500 Sobic001G514100--Sobic001G281500 Sobic003G327200 Sobic003G327200 Sobic001G514100--Sobic003G327200 Sobic001G514100--Sobic005G197300 Sobic001G375000 Sobic001G375000 Sobic001G514100--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic001G514100--Sobic003G128400 Sobic001G494500 Sobic001G494500 Sobic001G514100--Sobic001G494500 Sobic002G297400 Sobic002G297400 Sobic001G514100--Sobic002G297400 Sobic001G382800 Sobic001G382800 Sobic001G514100--Sobic001G382800 Sobic002G158800 Sobic002G158800 Sobic001G099000--Sobic002G158800 Sobic005G184300 Sobic005G184300 Sobic001G099000--Sobic005G184300 Sobic007G015300 Sobic007G015300 Sobic001G099000--Sobic007G015300 Sobic002G081500 Sobic002G081500 Sobic001G099000--Sobic002G081500 Sobic001G099000--Sobic004G255500 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic004G255500--Sobic001G099000 Sobic001G448600 Sobic001G448600 Sobic004G255500--Sobic001G448600 Sobic004G255500--Sobic005G022800 Sobic004G255500--Sobic001G281500 Sobic002G013700 Sobic002G013700 Sobic004G255500--Sobic002G013700 Sobic004G255500--Sobic010G027200 Sobic004G255500--Sobic005G184300 Sobic004G255500--Sobic002G140000 Sobic004G255500--Sobic007G015300 Sobic001G037500 Sobic001G037500 Sobic006G273400--Sobic001G037500 Sobic001G054100 Sobic001G054100 Sobic006G273400--Sobic001G054100 Sobic004G206200 Sobic004G206200 Sobic006G273400--Sobic004G206200 Sobic006G273400--Sobic001G099000 Sobic006G273400--Sobic002G081500 Sobic003G084500 Sobic003G084500 Sobic006G273400--Sobic003G084500 Sobic006G273400--Sobic002G297400 Sobic004G179200 Sobic004G179200 Sobic006G273400--Sobic004G179200 Sobic008G078900 Sobic008G078900 Sobic006G273400--Sobic008G078900 Sobic004G263200--Sobic003G162800 Sobic004G263200--Sobic003G327200 Sobic004G003900 Sobic004G003900 Sobic004G263200--Sobic004G003900 Sobic004G214400 Sobic004G214400 Sobic004G263200--Sobic004G214400 Sobic007G101300 Sobic007G101300 Sobic004G263200--Sobic007G101300 Sobic004G263200--Sobic005G197300 Sobic004G263200--Sobic003G128400 Sobic004G263200--Sobic010G027200 Sobic004G263200--Sobic002G140000 Sobic003G434700 Sobic003G434700 Sobic001G022500--Sobic003G434700 Sobic001G022500--Sobic004G225600 Sobic001G022500--Sobic004G003900 Sobic001G022500--Sobic003G162800 Sobic001G003900 Sobic001G003900 Sobic001G022500--Sobic001G003900 Sobic003G067100 Sobic003G067100 Sobic001G022500--Sobic003G067100 Sobic001G022500--Sobic001G375000 Sobic001G022500--Sobic001G099000 Sobic001G022500--Sobic003G327200 Sobic004G246800 Sobic004G246800 Sobic002G209600--Sobic004G246800 Sobic007G052900 Sobic007G052900 Sobic002G209600--Sobic007G052900 Sobic006G191400 Sobic006G191400 Sobic002G209600--Sobic006G191400 Sobic001G269300 Sobic001G269300 Sobic002G209600--Sobic001G269300 Sobic009G251300 Sobic009G251300 Sobic002G209600--Sobic009G251300 Sobic005G063700 Sobic005G063700 Sobic002G209600--Sobic005G063700 Sobic008G131700 Sobic008G131700 Sobic002G209600--Sobic008G131700 Sobic007G076700 Sobic007G076700 Sobic002G209600--Sobic007G076700 Sobic002G330400 Sobic002G330400 Sobic002G209600--Sobic002G330400 Sobic004G225600--Sobic001G022500 Sobic004G208600 Sobic004G208600 Sobic004G225600--Sobic004G208600 Sobic004G225600--Sobic003G162800 Sobic004G225600--Sobic001G099000 Sobic007G095500 Sobic007G095500 Sobic004G225600--Sobic007G095500 Sobic006G058100 Sobic006G058100 Sobic004G225600--Sobic006G058100 Sobic004G225600--Sobic001G375000 Sobic004G225600--Sobic003G434700 Sobic004G225600--Sobic005G184300
Octagon: transcription factors


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