Gene annotation
Transcriptome id Sobic.005G022800.5,Sobic.005G022800.3,Sobic.005G022800.4,Sobic.005G022800.2
Synonym Sb05g001920, BPG2
Functional annotation GTP binding protein, putative, expressed
UniProt C5Y401
Pfam PF01926
Panther DB PTHR11089 PTHR11089:SF38
NCBI CDD KOG1249; Predicted GTPases
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT3G57180 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g30380.1 : GTP binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a033388
Brachypodium -
Barley -
Wheat TraesCS5B02G005000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
2 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
3 Sobic.004G255500 SET domain-containing protein, putative, expressed -
4 Sobic.003G373300 DNA polymerase I, putative, expressed -
5 Sobic.005G197300 GTP-binding protein, putative, expressed K03977: engA, GTPase
6 Sobic.001G099000 expressed protein -
7 Sobic.007G116100 thioredoxin, putative, expressed -
8 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
9 Sobic.008G021700 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
10 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
11 Sobic.004G246800 pentatricopeptide, putative, expressed -
12 Sobic.001G142400 RIO1 family protein, expressed -
13 Sobic.007G015300 calreticulin family protein, expressed -
14 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
15 Sobic.002G181132 - -
16 Sobic.003G162800 expressed protein -
17 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
18 Sobic.007G201400 pentatricopeptide, putative, expressed -
19 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
20 Sobic.006G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G022800 Sobic005G022800 Sobic002G140000 Sobic002G140000 Sobic005G022800--Sobic002G140000 Sobic006G263800 Sobic006G263800 Sobic005G022800--Sobic006G263800 Sobic004G255500 Sobic004G255500 Sobic005G022800--Sobic004G255500 Sobic003G373300 Sobic003G373300 Sobic005G022800--Sobic003G373300 Sobic005G197300 Sobic005G197300 Sobic005G022800--Sobic005G197300 Sobic001G099000 Sobic001G099000 Sobic005G022800--Sobic001G099000 Sobic007G116100 Sobic007G116100 Sobic005G022800--Sobic007G116100 Sobic010G027200 Sobic010G027200 Sobic005G022800--Sobic010G027200 Sobic008G021700 Sobic008G021700 Sobic005G022800--Sobic008G021700 Sobic002G140000--Sobic010G027200 Sobic002G140000--Sobic007G116100 Sobic007G015300 Sobic007G015300 Sobic002G140000--Sobic007G015300 Sobic002G140000--Sobic005G022800 Sobic006G237100 Sobic006G237100 Sobic002G140000--Sobic006G237100 Sobic002G140000--Sobic006G263800 Sobic002G140000--Sobic001G099000 Sobic001G375000 Sobic001G375000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400 Sobic006G263800--Sobic007G116100 Sobic002G190100 Sobic002G190100 Sobic006G263800--Sobic002G190100 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic006G263800--Sobic005G022800 Sobic006G263800--Sobic001G099000 Sobic006G263800--Sobic010G027200 Sobic006G263800--Sobic006G237100 Sobic001G120000 Sobic001G120000 Sobic006G263800--Sobic001G120000 Sobic004G255500--Sobic001G099000 Sobic001G448600 Sobic001G448600 Sobic004G255500--Sobic001G448600 Sobic004G255500--Sobic005G022800 Sobic004G255500--Sobic001G281500 Sobic002G013700 Sobic002G013700 Sobic004G255500--Sobic002G013700 Sobic004G255500--Sobic010G027200 Sobic005G184300 Sobic005G184300 Sobic004G255500--Sobic005G184300 Sobic004G255500--Sobic002G140000 Sobic004G255500--Sobic007G015300 Sobic003G373300--Sobic001G099000 Sobic006G166000 Sobic006G166000 Sobic003G373300--Sobic006G166000 Sobic001G391400 Sobic001G391400 Sobic003G373300--Sobic001G391400 Sobic001G383900 Sobic001G383900 Sobic003G373300--Sobic001G383900 Sobic002G158800 Sobic002G158800 Sobic003G373300--Sobic002G158800 Sobic005G110481 Sobic005G110481 Sobic003G373300--Sobic005G110481 Sobic009G104700 Sobic009G104700 Sobic003G373300--Sobic009G104700 Sobic003G373300--Sobic010G027200 Sobic003G373300--Sobic005G022800 Sobic005G197300--Sobic005G022800 Sobic001G514100 Sobic001G514100 Sobic005G197300--Sobic001G514100 Sobic005G197300--Sobic001G099000 Sobic005G197300--Sobic004G255500 Sobic006G273400 Sobic006G273400 Sobic005G197300--Sobic006G273400 Sobic004G263200 Sobic004G263200 Sobic005G197300--Sobic004G263200 Sobic001G022500 Sobic001G022500 Sobic005G197300--Sobic001G022500 Sobic002G209600 Sobic002G209600 Sobic005G197300--Sobic002G209600 Sobic004G225600 Sobic004G225600 Sobic005G197300--Sobic004G225600 Sobic001G099000--Sobic002G158800 Sobic001G099000--Sobic005G184300 Sobic001G099000--Sobic007G015300 Sobic002G081500 Sobic002G081500 Sobic001G099000--Sobic002G081500 Sobic001G099000--Sobic004G255500 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic001G099000--Sobic003G373300 Sobic001G099000--Sobic006G166000 Sobic007G116100--Sobic010G027200 Sobic007G116100--Sobic001G281500 Sobic007G116100--Sobic002G140000 Sobic007G116100--Sobic006G263800 Sobic007G116100--Sobic001G099000 Sobic007G116100--Sobic007G015300 Sobic007G116100--Sobic006G237100 Sobic004G338300 Sobic004G338300 Sobic007G116100--Sobic004G338300 Sobic007G116100--Sobic005G022800 Sobic010G027200--Sobic002G140000 Sobic010G027200--Sobic001G375000 Sobic010G027200--Sobic001G099000 Sobic010G027200--Sobic007G116100 Sobic010G027200--Sobic006G237100 Sobic010G027200--Sobic007G015300 Sobic010G027200--Sobic005G184300 Sobic010G027200--Sobic004G338300 Sobic010G027200--Sobic009G104700 Sobic004G151900 Sobic004G151900 Sobic008G021700--Sobic004G151900 Sobic009G251300 Sobic009G251300 Sobic008G021700--Sobic009G251300 Sobic008G021700--Sobic005G022800 Sobic004G246800 Sobic004G246800 Sobic008G021700--Sobic004G246800 Sobic001G076200 Sobic001G076200 Sobic008G021700--Sobic001G076200 Sobic008G021700--Sobic002G209600 Sobic001G142400 Sobic001G142400 Sobic008G021700--Sobic001G142400 Sobic005G077933 Sobic005G077933 Sobic008G021700--Sobic005G077933 Sobic001G061600 Sobic001G061600 Sobic008G021700--Sobic001G061600
Octagon: transcription factors


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