Gene annotation
Transcriptome id Sobic.008G021700.1
Synonym Sb08g001930
Functional annotation peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
UniProt C5YR25
Pfam PF05698 PF05697
Panther DB PTHR30560 PTHR30560:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0015031; protein transport GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT5G55220 : trigger factor type chaperone family protein
RAP-DB (Rice) LOC_Os06g20320.1 : peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
MaizeGDB (Corn) Zm00025a053748
Brachypodium KQK18489
Barley HORVU7Hr1G045680.1 , HORVU7Hr1G045680.2 , HORVU7Hr1G045680.3 , HORVU7Hr1G045680.4 , HORVU7Hr1G045680.5
Wheat TraesCS7B02G129300 , TraesCS7A02G222800 , TraesCS7D02G224400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G151900 - -
2 Sobic.009G251300 endonuclease, putative, expressed -
3 Sobic.005G022800 GTP binding protein, putative, expressed -
4 Sobic.004G246800 pentatricopeptide, putative, expressed -
5 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
6 Sobic.002G209600 CBS domain containing protein, expressed -
7 Sobic.001G142400 RIO1 family protein, expressed -
8 Sobic.005G077933 - -
9 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
10 Sobic.008G131700 PsbP, putative, expressed -
11 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
12 Sobic.005G197300 GTP-binding protein, putative, expressed K03977: engA, GTPase
13 Sobic.003G042100 MAR-binding filament-like protein 1, putative, expressed -
14 Sobic.001G099000 expressed protein -
15 Sobic.007G210600 ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.005G084000 expressed protein -
17 Sobic.004G225600 - -
18 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
19 Sobic.007G013000 transferase family protein, putative, expressed -
20 Sobic.003G163100 expressed protein K08819: cyclin-dependent kinase 12/13


Gene co-expression network
sample Sobic008G021700 Sobic008G021700 Sobic004G151900 Sobic004G151900 Sobic008G021700--Sobic004G151900 Sobic009G251300 Sobic009G251300 Sobic008G021700--Sobic009G251300 Sobic005G022800 Sobic005G022800 Sobic008G021700--Sobic005G022800 Sobic004G246800 Sobic004G246800 Sobic008G021700--Sobic004G246800 Sobic001G076200 Sobic001G076200 Sobic008G021700--Sobic001G076200 Sobic002G209600 Sobic002G209600 Sobic008G021700--Sobic002G209600 Sobic001G142400 Sobic001G142400 Sobic008G021700--Sobic001G142400 Sobic005G077933 Sobic005G077933 Sobic008G021700--Sobic005G077933 Sobic001G061600 Sobic001G061600 Sobic008G021700--Sobic001G061600 Sobic004G151900--Sobic008G021700 Sobic004G151900--Sobic009G251300 Sobic004G151900--Sobic001G061600 Sobic007G154800 Sobic007G154800 Sobic004G151900--Sobic007G154800 Sobic004G151900--Sobic004G246800 Sobic007G066050 Sobic007G066050 Sobic004G151900--Sobic007G066050 Sobic003G029300 Sobic003G029300 Sobic004G151900--Sobic003G029300 Sobic004G151900--Sobic001G142400 Sobic009G064766 Sobic009G064766 Sobic004G151900--Sobic009G064766 Sobic009G251300--Sobic004G151900 Sobic009G251300--Sobic008G021700 Sobic002G330400 Sobic002G330400 Sobic009G251300--Sobic002G330400 Sobic003G163100 Sobic003G163100 Sobic009G251300--Sobic003G163100 Sobic009G251300--Sobic002G209600 Sobic004G016500 Sobic004G016500 Sobic009G251300--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic009G251300--Sobic001G046600 Sobic009G251300--Sobic005G077933 Sobic006G191400 Sobic006G191400 Sobic009G251300--Sobic006G191400 Sobic002G140000 Sobic002G140000 Sobic005G022800--Sobic002G140000 Sobic006G263800 Sobic006G263800 Sobic005G022800--Sobic006G263800 Sobic004G255500 Sobic004G255500 Sobic005G022800--Sobic004G255500 Sobic003G373300 Sobic003G373300 Sobic005G022800--Sobic003G373300 Sobic005G197300 Sobic005G197300 Sobic005G022800--Sobic005G197300 Sobic001G099000 Sobic001G099000 Sobic005G022800--Sobic001G099000 Sobic007G116100 Sobic007G116100 Sobic005G022800--Sobic007G116100 Sobic010G027200 Sobic010G027200 Sobic005G022800--Sobic010G027200 Sobic005G022800--Sobic008G021700 Sobic004G246800--Sobic001G076200 Sobic004G246800--Sobic002G209600 Sobic008G131700 Sobic008G131700 Sobic004G246800--Sobic008G131700 Sobic004G246800--Sobic008G021700 Sobic004G246800--Sobic005G022800 Sobic004G246800--Sobic004G151900 Sobic001G514100 Sobic001G514100 Sobic004G246800--Sobic001G514100 Sobic004G246800--Sobic005G197300 Sobic004G246800--Sobic004G255500 Sobic001G076200--Sobic004G246800 Sobic003G030400 Sobic003G030400 Sobic001G076200--Sobic003G030400 Sobic001G537700 Sobic001G537700 Sobic001G076200--Sobic001G537700 Sobic003G114100 Sobic003G114100 Sobic001G076200--Sobic003G114100 Sobic009G233800 Sobic009G233800 Sobic001G076200--Sobic009G233800 Sobic004G249500 Sobic004G249500 Sobic001G076200--Sobic004G249500 Sobic001G076200--Sobic008G021700 Sobic002G114700 Sobic002G114700 Sobic001G076200--Sobic002G114700 Sobic004G055600 Sobic004G055600 Sobic001G076200--Sobic004G055600 Sobic002G209600--Sobic004G246800 Sobic007G052900 Sobic007G052900 Sobic002G209600--Sobic007G052900 Sobic002G209600--Sobic006G191400 Sobic001G269300 Sobic001G269300 Sobic002G209600--Sobic001G269300 Sobic002G209600--Sobic009G251300 Sobic005G063700 Sobic005G063700 Sobic002G209600--Sobic005G063700 Sobic002G209600--Sobic008G131700 Sobic007G076700 Sobic007G076700 Sobic002G209600--Sobic007G076700 Sobic002G209600--Sobic002G330400 Sobic001G142400--Sobic006G263800 Sobic005G084000 Sobic005G084000 Sobic001G142400--Sobic005G084000 Sobic001G215300 Sobic001G215300 Sobic001G142400--Sobic001G215300 Sobic002G190100 Sobic002G190100 Sobic001G142400--Sobic002G190100 Sobic001G142400--Sobic005G022800 Sobic007G201400 Sobic007G201400 Sobic001G142400--Sobic007G201400 Sobic001G142400--Sobic008G021700 Sobic001G236800 Sobic001G236800 Sobic001G142400--Sobic001G236800 Sobic001G142400--Sobic002G140000 Sobic005G077933--Sobic009G251300 Sobic005G077933--Sobic006G191400 Sobic010G144100 Sobic010G144100 Sobic005G077933--Sobic010G144100 Sobic002G124200 Sobic002G124200 Sobic005G077933--Sobic002G124200 Sobic009G045700 Sobic009G045700 Sobic005G077933--Sobic009G045700 Sobic008G068400 Sobic008G068400 Sobic005G077933--Sobic008G068400 Sobic005G077933--Sobic008G021700 Sobic005G077933--Sobic002G209600 Sobic005G141801 Sobic005G141801 Sobic005G077933--Sobic005G141801 Sobic001G061600--Sobic004G151900 Sobic003G042100 Sobic003G042100 Sobic001G061600--Sobic003G042100 Sobic006G062400 Sobic006G062400 Sobic001G061600--Sobic006G062400 Sobic001G061600--Sobic007G154800 Sobic007G182600 Sobic007G182600 Sobic001G061600--Sobic007G182600 Sobic001G061600--Sobic008G021700 Sobic001G164200 Sobic001G164200 Sobic001G061600--Sobic001G164200 Sobic001G061600--Sobic003G029300 Sobic002G232500 Sobic002G232500 Sobic001G061600--Sobic002G232500
Octagon: transcription factors


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