Gene annotation
Transcriptome id Sobic.007G210600.1
Synonym ATMRP14, MRP14
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt A0A1B6PIZ4
Pfam PF00664 PF00005
Panther DB PTHR24223 PTHR24223:SF192
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0005524ATP binding GO:0016887ATPase activity


Orthologs (automatic annotation)
TAIR AT3G59140 : multidrug resistance-associated protein 14
RAP-DB (Rice) LOC_Os06g06440.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a005094 , Zm00025a049971 , Zm00025a049962
Brachypodium KQK19506 , KQK19507 , KQK19501 , KQK19509 , PNT76487 , PNT76486
Barley HORVU7Hr1G024960.18 , HORVU7Hr1G024960.19 , HORVU7Hr1G024960.16 , HORVU7Hr1G024960.17 , HORVU7Hr1G024960.14 , HORVU7Hr1G024960.15 , HORVU7Hr1G024960.12 , HORVU7Hr1G024960.10 , HORVU7Hr1G024960.11 , HORVU7Hr1G025040.10 , HORVU7Hr1G025000.8 , HORVU7Hr1G025000.3 , HORVU7Hr1G025110.8 , HORVU7Hr1G024960.8 , HORVU7Hr1G024960.9 , HORVU7Hr1G024960.4 , HORVU7Hr1G024960.5 , HORVU7Hr1G024960.6 , HORVU7Hr1G024960.7 , HORVU7Hr1G024960.1 , HORVU7Hr1G024960.2 , HORVU7Hr1G024960.3 , HORVU7Hr1G025140.1 , HORVU2Hr1G022560.14 , HORVU7Hr1G024980.8 , HORVU7Hr1G024980.9 , HORVU7Hr1G024980.6 , HORVU7Hr1G024980.7 , HORVU7Hr1G024980.4 , HORVU7Hr1G024980.5 , HORVU7Hr1G024980.2 , HORVU7Hr1G024980.3 , HORVU7Hr1G024980.1 , HORVU7Hr1G025230.4 , HORVU7Hr1G025230.3 , HORVU7Hr1G025110.9 , HORVU7Hr1G025110.2 , HORVU7Hr1G025110.1 , HORVU7Hr1G025110.6 , HORVU7Hr1G025110.7 , HORVU7Hr1G025110.4 , HORVU7Hr1G025110.5 , HORVU7Hr1G025000.27 , HORVU7Hr1G025000.26 , HORVU7Hr1G025000.23 , HORVU7Hr1G025000.22 , HORVU7Hr1G025000.21 , HORVU7Hr1G025000.20 , HORVU7Hr1G025000.29 , HORVU7Hr1G025000.28 , HORVU7Hr1G025040.8 , HORVU7Hr1G025040.9 , HORVU7Hr1G025040.1 , HORVU7Hr1G025040.2 , HORVU7Hr1G025040.5 , HORVU7Hr1G025040.6 , HORVU7Hr1G025040.7 , HORVU2Hr1G022560.9 , HORVU2Hr1G022560.3 , HORVU2Hr1G022560.2 , HORVU2Hr1G022560.1 , HORVU2Hr1G022560.7 , HORVU2Hr1G022560.6 , HORVU2Hr1G022560.5 , HORVU2Hr1G022560.4 , HORVU7Hr1G024980.14 , HORVU7Hr1G024980.15 , HORVU7Hr1G024980.10 , HORVU7Hr1G024980.11 , HORVU7Hr1G024980.12 , HORVU7Hr1G024980.13 , HORVU7Hr1G025000.30 , HORVU7Hr1G025000.31 , HORVU7Hr1G025000.32 , HORVU7Hr1G025000.18 , HORVU7Hr1G025000.19 , HORVU7Hr1G025000.7 , HORVU2Hr1G022560.13 , HORVU2Hr1G022560.12 , HORVU2Hr1G022560.11 , HORVU2Hr1G022560.10 , HORVU7Hr1G025000.17 , HORVU7Hr1G025000.14 , HORVU7Hr1G025000.15 , HORVU7Hr1G025000.12 , HORVU7Hr1G025000.13 , HORVU7Hr1G025000.10 , HORVU7Hr1G025000.11 , HORVU7Hr1G024960.23 , HORVU7Hr1G024960.22 , HORVU7Hr1G024960.21 , HORVU7Hr1G024960.20 , HORVU7Hr1G025050.2 , HORVU7Hr1G025050.1 , HORVU7Hr1G025110.10 , HORVU7Hr1G025110.3
Wheat TraesCS7D02G115100 , TraesCS7D02G116200 , TraesCS7D02G116100 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCSU02G093000 , TraesCS7B02G016100 , TraesCS7D02G115300 , TraesCS7A02G118900 , TraesCS7D02G115900 , TraesCS7B02G016500 , TraesCSU02G159700 , TraesCS7D02G114100 , TraesCS7D02G114100 , TraesCS7D02G114100 , TraesCS7D02G114100 , TraesCS7A02G118900 , TraesCS7B02G016300 , TraesCSU02G095900 , TraesCSU02G095900 , TraesCSU02G093100 , TraesCS7D02G116300 , TraesCS7D02G116300 , TraesCS7B02G015400 , TraesCSU02G095900 , TraesCS7B02G016300 , TraesCS7A02G119000 , TraesCS2D02G131000 , TraesCS2D02G131000 , TraesCS7B02G016400 , TraesCS7B02G016400 , TraesCS7D02G117000 , TraesCS2B02G150600 , TraesCS7A02G119100 , TraesCS2B02G529000 , TraesCS2B02G529000 , TraesCS2B02G529000 , TraesCSU02G223100 , TraesCS2A02G128500 , TraesCS7A02G118800 , TraesCS7A02G118800 , TraesCS7A02G118800 , TraesCS7A02G118800 , TraesCS7A02G119300 , TraesCS7D02G114200 , TraesCS7D02G116000 , TraesCS2B02G528900 , TraesCS2B02G528900 , TraesCS2B02G528900 , TraesCS7D02G114300 , TraesCS7A02G119800 , TraesCS7B02G017500 , TraesCS7A02G119500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G495300 expressed protein -
2 Sobic.003G074700 thylakoid lumenal protein, putative, expressed -
3 Sobic.005G084000 expressed protein -
4 Sobic.008G131700 PsbP, putative, expressed -
5 Sobic.004G143400 - -
6 Sobic.007G201400 pentatricopeptide, putative, expressed -
7 Sobic.009G136900 peptide transporter PTR2, putative, expressed -
8 Sobic.006G248200 - -
9 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
10 Sobic.004G246800 pentatricopeptide, putative, expressed -
11 Sobic.001G099000 expressed protein -
12 Sobic.001G142400 RIO1 family protein, expressed -
13 Sobic.003G014000 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed -
14 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
15 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
16 Sobic.001G475600 prenyltransferase, putative, expressed K02548: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
17 Sobic.003G305300 - -
18 Sobic.001G384800 expressed protein -
19 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
20 Sobic.006G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G210600 Sobic007G210600 Sobic001G495300 Sobic001G495300 Sobic007G210600--Sobic001G495300 Sobic003G074700 Sobic003G074700 Sobic007G210600--Sobic003G074700 Sobic005G084000 Sobic005G084000 Sobic007G210600--Sobic005G084000 Sobic008G131700 Sobic008G131700 Sobic007G210600--Sobic008G131700 Sobic004G143400 Sobic004G143400 Sobic007G210600--Sobic004G143400 Sobic007G201400 Sobic007G201400 Sobic007G210600--Sobic007G201400 Sobic009G136900 Sobic009G136900 Sobic007G210600--Sobic009G136900 Sobic006G248200 Sobic006G248200 Sobic007G210600--Sobic006G248200 Sobic004G015700 Sobic004G015700 Sobic007G210600--Sobic004G015700 Sobic001G495300--Sobic007G210600 Sobic001G495300--Sobic003G074700 Sobic001G495300--Sobic005G084000 Sobic003G137100 Sobic003G137100 Sobic001G495300--Sobic003G137100 Sobic001G041800 Sobic001G041800 Sobic001G495300--Sobic001G041800 Sobic002G109000 Sobic002G109000 Sobic001G495300--Sobic002G109000 Sobic001G099000 Sobic001G099000 Sobic001G495300--Sobic001G099000 Sobic001G495300--Sobic008G131700 Sobic001G495300--Sobic007G201400 Sobic003G074700--Sobic008G131700 Sobic002G215000 Sobic002G215000 Sobic003G074700--Sobic002G215000 Sobic003G074700--Sobic001G495300 Sobic003G074700--Sobic007G210600 Sobic003G074700--Sobic007G201400 Sobic003G074700--Sobic005G084000 Sobic004G068300 Sobic004G068300 Sobic003G074700--Sobic004G068300 Sobic003G305300 Sobic003G305300 Sobic003G074700--Sobic003G305300 Sobic003G030900 Sobic003G030900 Sobic003G074700--Sobic003G030900 Sobic005G084000--Sobic001G495300 Sobic005G084000--Sobic007G210600 Sobic005G084000--Sobic008G131700 Sobic001G142400 Sobic001G142400 Sobic005G084000--Sobic001G142400 Sobic005G084000--Sobic003G074700 Sobic005G084000--Sobic004G143400 Sobic009G083300 Sobic009G083300 Sobic005G084000--Sobic009G083300 Sobic005G084000--Sobic007G201400 Sobic003G069200 Sobic003G069200 Sobic005G084000--Sobic003G069200 Sobic008G131700--Sobic003G074700 Sobic008G131700--Sobic002G215000 Sobic008G131700--Sobic005G084000 Sobic008G131700--Sobic001G495300 Sobic008G131700--Sobic003G305300 Sobic004G246800 Sobic004G246800 Sobic008G131700--Sobic004G246800 Sobic008G131700--Sobic007G210600 Sobic006G060200 Sobic006G060200 Sobic008G131700--Sobic006G060200 Sobic002G209600 Sobic002G209600 Sobic008G131700--Sobic002G209600 Sobic004G143400--Sobic005G084000 Sobic001G269300 Sobic001G269300 Sobic004G143400--Sobic001G269300 Sobic004G143400--Sobic007G210600 Sobic004G143400--Sobic001G495300 Sobic004G151900 Sobic004G151900 Sobic004G143400--Sobic004G151900 Sobic004G143400--Sobic006G060200 Sobic008G008500 Sobic008G008500 Sobic004G143400--Sobic008G008500 Sobic008G021700 Sobic008G021700 Sobic004G143400--Sobic008G021700 Sobic008G105300 Sobic008G105300 Sobic004G143400--Sobic008G105300 Sobic007G201400--Sobic003G074700 Sobic007G201400--Sobic001G495300 Sobic007G201400--Sobic001G142400 Sobic003G114100 Sobic003G114100 Sobic007G201400--Sobic003G114100 Sobic007G201400--Sobic008G131700 Sobic007G201400--Sobic005G084000 Sobic005G022800 Sobic005G022800 Sobic007G201400--Sobic005G022800 Sobic007G201400--Sobic007G210600 Sobic007G201400--Sobic001G099000 Sobic006G263800 Sobic006G263800 Sobic009G136900--Sobic006G263800 Sobic001G076200 Sobic001G076200 Sobic009G136900--Sobic001G076200 Sobic009G136900--Sobic007G210600 Sobic009G136900--Sobic003G114100 Sobic004G055600 Sobic004G055600 Sobic009G136900--Sobic004G055600 Sobic009G136900--Sobic004G015700 Sobic002G004000 Sobic002G004000 Sobic009G136900--Sobic002G004000 Sobic008G117600 Sobic008G117600 Sobic009G136900--Sobic008G117600 Sobic001G120000 Sobic001G120000 Sobic009G136900--Sobic001G120000 Sobic003G386300 Sobic003G386300 Sobic006G248200--Sobic003G386300 Sobic001G240000 Sobic001G240000 Sobic006G248200--Sobic001G240000 Sobic001G531200 Sobic001G531200 Sobic006G248200--Sobic001G531200 Sobic002G198600 Sobic002G198600 Sobic006G248200--Sobic002G198600 Sobic006G248200--Sobic003G030900 Sobic001G475600 Sobic001G475600 Sobic006G248200--Sobic001G475600 Sobic004G054500 Sobic004G054500 Sobic006G248200--Sobic004G054500 Sobic002G305700 Sobic002G305700 Sobic006G248200--Sobic002G305700 Sobic004G311100 Sobic004G311100 Sobic006G248200--Sobic004G311100 Sobic004G015700--Sobic006G263800 Sobic003G383500 Sobic003G383500 Sobic004G015700--Sobic003G383500 Sobic004G015700--Sobic009G083300 Sobic007G013400 Sobic007G013400 Sobic004G015700--Sobic007G013400 Sobic004G015700--Sobic001G099000 Sobic001G236800 Sobic001G236800 Sobic004G015700--Sobic001G236800 Sobic002G190100 Sobic002G190100 Sobic004G015700--Sobic002G190100 Sobic009G212000 Sobic009G212000 Sobic004G015700--Sobic009G212000 Sobic003G261200 Sobic003G261200 Sobic004G015700--Sobic003G261200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.