Gene annotation
Transcriptome id Sobic.001G495300.1
Synonym Sb01g046270
Functional annotation expressed protein
UniProt C5WWW7
Pfam PF06241
Panther DB PTHR31563 PTHR31563:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43745 : Protein of unknown function (DUF1012)
RAP-DB (Rice) LOC_Os03g06720.1 : expressed protein
MaizeGDB (Corn) Zm00025a000781
Brachypodium KQJ96162 , KQJ96163
Barley HORVU1Hr1G031010.41 , HORVU1Hr1G031010.40 , HORVU1Hr1G031010.42 , HORVU1Hr1G031010.45 , HORVU1Hr1G031010.44 , HORVU1Hr1G031010.46 , HORVU1Hr1G031010.30 , HORVU1Hr1G031010.23 , HORVU1Hr1G031010.22 , HORVU1Hr1G031010.21 , HORVU1Hr1G031010.20 , HORVU1Hr1G031010.27 , HORVU1Hr1G031010.26 , HORVU1Hr1G031010.25 , HORVU1Hr1G031010.24 , HORVU1Hr1G031010.29 , HORVU1Hr1G031010.28 , HORVU1Hr1G031010.31 , HORVU1Hr1G031010.32 , HORVU1Hr1G031010.33 , HORVU1Hr1G031010.34 , HORVU1Hr1G031010.35 , HORVU1Hr1G031010.36 , HORVU1Hr1G031010.37 , HORVU1Hr1G031010.38 , HORVU1Hr1G031010.39 , HORVU1Hr1G031010.1 , HORVU1Hr1G031010.2 , HORVU1Hr1G031010.3 , HORVU1Hr1G031010.4 , HORVU1Hr1G031010.5 , HORVU1Hr1G031010.6 , HORVU1Hr1G031010.7 , HORVU1Hr1G031010.8 , HORVU1Hr1G031010.9 , HORVU1Hr1G031010.18 , HORVU1Hr1G031010.19 , HORVU1Hr1G031010.12 , HORVU1Hr1G031010.13 , HORVU1Hr1G031010.10 , HORVU1Hr1G031010.11 , HORVU1Hr1G031010.16 , HORVU1Hr1G031010.17 , HORVU1Hr1G031010.14 , HORVU1Hr1G031010.15
Wheat TraesCS1B02G150800 , TraesCS1A02G135600 , TraesCS1D02G131300 , TraesCS1D02G131300
Populus -


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cDNA sequences
Sobic.001G495300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G210600 ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.003G074700 thylakoid lumenal protein, putative, expressed -
3 Sobic.005G084000 expressed protein -
4 Sobic.003G137100 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
5 Sobic.001G041800 -(PubMedID : 29017446)@magnesium-chelatase subunit chlD, chloroplast precursor, putative, expressed K03404: chlD, magnesium chelatase subunit D
6 Sobic.002G109000 tetratricopeptide repeat containing protein, putative, expressed -
7 Sobic.001G099000 expressed protein -
8 Sobic.008G131700 PsbP, putative, expressed -
9 Sobic.007G201400 pentatricopeptide, putative, expressed -
10 Sobic.001G384800 expressed protein -
11 Sobic.002G081500 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
12 Sobic.004G040600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
13 Sobic.001G415400 PsbP, putative, expressed -
14 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
15 Sobic.006G060200 basic proline-rich protein, putative, expressed -
16 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
17 Sobic.001G337600 expressed protein -
18 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
19 Sobic.006G248200 - -
20 Sobic.001G536800 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)


Gene co-expression network
sample Sobic001G495300 Sobic001G495300 Sobic007G210600 Sobic007G210600 Sobic001G495300--Sobic007G210600 Sobic003G074700 Sobic003G074700 Sobic001G495300--Sobic003G074700 Sobic005G084000 Sobic005G084000 Sobic001G495300--Sobic005G084000 Sobic003G137100 Sobic003G137100 Sobic001G495300--Sobic003G137100 Sobic001G041800 Sobic001G041800 Sobic001G495300--Sobic001G041800 Sobic002G109000 Sobic002G109000 Sobic001G495300--Sobic002G109000 Sobic001G099000 Sobic001G099000 Sobic001G495300--Sobic001G099000 Sobic008G131700 Sobic008G131700 Sobic001G495300--Sobic008G131700 Sobic007G201400 Sobic007G201400 Sobic001G495300--Sobic007G201400 Sobic007G210600--Sobic001G495300 Sobic007G210600--Sobic003G074700 Sobic007G210600--Sobic005G084000 Sobic007G210600--Sobic008G131700 Sobic004G143400 Sobic004G143400 Sobic007G210600--Sobic004G143400 Sobic007G210600--Sobic007G201400 Sobic009G136900 Sobic009G136900 Sobic007G210600--Sobic009G136900 Sobic006G248200 Sobic006G248200 Sobic007G210600--Sobic006G248200 Sobic004G015700 Sobic004G015700 Sobic007G210600--Sobic004G015700 Sobic003G074700--Sobic008G131700 Sobic002G215000 Sobic002G215000 Sobic003G074700--Sobic002G215000 Sobic003G074700--Sobic001G495300 Sobic003G074700--Sobic007G210600 Sobic003G074700--Sobic007G201400 Sobic003G074700--Sobic005G084000 Sobic004G068300 Sobic004G068300 Sobic003G074700--Sobic004G068300 Sobic003G305300 Sobic003G305300 Sobic003G074700--Sobic003G305300 Sobic003G030900 Sobic003G030900 Sobic003G074700--Sobic003G030900 Sobic005G084000--Sobic001G495300 Sobic005G084000--Sobic007G210600 Sobic005G084000--Sobic008G131700 Sobic001G142400 Sobic001G142400 Sobic005G084000--Sobic001G142400 Sobic005G084000--Sobic003G074700 Sobic005G084000--Sobic004G143400 Sobic009G083300 Sobic009G083300 Sobic005G084000--Sobic009G083300 Sobic005G084000--Sobic007G201400 Sobic003G069200 Sobic003G069200 Sobic005G084000--Sobic003G069200 Sobic001G536800 Sobic001G536800 Sobic003G137100--Sobic001G536800 Sobic009G085500 Sobic009G085500 Sobic003G137100--Sobic009G085500 Sobic001G069000 Sobic001G069000 Sobic003G137100--Sobic001G069000 Sobic003G137100--Sobic001G495300 Sobic006G010900 Sobic006G010900 Sobic003G137100--Sobic006G010900 Sobic003G412900 Sobic003G412900 Sobic003G137100--Sobic003G412900 Sobic001G233400 Sobic001G233400 Sobic003G137100--Sobic001G233400 Sobic002G000700 Sobic002G000700 Sobic003G137100--Sobic002G000700 Sobic006G103400 Sobic006G103400 Sobic003G137100--Sobic006G103400 Sobic003G197400 Sobic003G197400 Sobic001G041800--Sobic003G197400 Sobic004G175500 Sobic004G175500 Sobic001G041800--Sobic004G175500 Sobic006G222700 Sobic006G222700 Sobic001G041800--Sobic006G222700 Sobic003G132100 Sobic003G132100 Sobic001G041800--Sobic003G132100 Sobic001G041800--Sobic006G103400 Sobic004G343300 Sobic004G343300 Sobic001G041800--Sobic004G343300 Sobic002G198600 Sobic002G198600 Sobic001G041800--Sobic002G198600 Sobic001G415400 Sobic001G415400 Sobic001G041800--Sobic001G415400 Sobic001G041800--Sobic004G068300 Sobic006G055800 Sobic006G055800 Sobic002G109000--Sobic006G055800 Sobic002G109000--Sobic001G099000 Sobic002G297400 Sobic002G297400 Sobic002G109000--Sobic002G297400 Sobic001G122400 Sobic001G122400 Sobic002G109000--Sobic001G122400 Sobic003G324700 Sobic003G324700 Sobic002G109000--Sobic003G324700 Sobic001G368500 Sobic001G368500 Sobic002G109000--Sobic001G368500 Sobic003G045300 Sobic003G045300 Sobic002G109000--Sobic003G045300 Sobic002G081500 Sobic002G081500 Sobic002G109000--Sobic002G081500 Sobic003G128400 Sobic003G128400 Sobic002G109000--Sobic003G128400 Sobic002G158800 Sobic002G158800 Sobic001G099000--Sobic002G158800 Sobic005G184300 Sobic005G184300 Sobic001G099000--Sobic005G184300 Sobic007G015300 Sobic007G015300 Sobic001G099000--Sobic007G015300 Sobic001G099000--Sobic002G081500 Sobic004G255500 Sobic004G255500 Sobic001G099000--Sobic004G255500 Sobic010G027200 Sobic010G027200 Sobic001G099000--Sobic010G027200 Sobic001G099000--Sobic002G109000 Sobic003G373300 Sobic003G373300 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic008G131700--Sobic003G074700 Sobic008G131700--Sobic002G215000 Sobic008G131700--Sobic005G084000 Sobic008G131700--Sobic001G495300 Sobic008G131700--Sobic003G305300 Sobic004G246800 Sobic004G246800 Sobic008G131700--Sobic004G246800 Sobic008G131700--Sobic007G210600 Sobic006G060200 Sobic006G060200 Sobic008G131700--Sobic006G060200 Sobic002G209600 Sobic002G209600 Sobic008G131700--Sobic002G209600 Sobic007G201400--Sobic003G074700 Sobic007G201400--Sobic001G495300 Sobic007G201400--Sobic001G142400 Sobic003G114100 Sobic003G114100 Sobic007G201400--Sobic003G114100 Sobic007G201400--Sobic008G131700 Sobic007G201400--Sobic005G084000 Sobic005G022800 Sobic005G022800 Sobic007G201400--Sobic005G022800 Sobic007G201400--Sobic007G210600 Sobic007G201400--Sobic001G099000
Octagon: transcription factors


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