Gene annotation
Transcriptome id Sobic.004G040600.2,Sobic.004G040600.4,Sobic.004G040600.3,Sobic.004G040600.1
Synonym Sb04g003510
Functional annotation pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed
UniProt A0A1Z5RKT3 , C5XUN4 , A0A1Z5RLB7
Pfam PF01243 PF13883
Panther DB PTHR13343 PTHR13343:SF16
NCBI CDD KOG3374; Cellular repressor of transcription
KEGG Orthology -
Gene Ontology GO:0010181; FMN binding GO:0004733pyridoxamine-phosphate oxidase activity


Orthologs (automatic annotation)
TAIR AT1G51560 : Pyridoxamine 5\'-phosphate oxidase family protein
RAP-DB (Rice) LOC_Os02g05500.1 : pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a018995
Brachypodium -
Barley -
Wheat -
Populus PNT18630 , PNT18631 , PNT21955 , PNT21957 , PNT21956


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G047300 Minichromosome maintenance (MCM2/3/5) family protein("PubMedID : 26759170,PubMedID : 24597475")@EMB1688, putative, expressed K06949: rsgA, ribosome biogenesis GTPase / thiamine phosphate phosphatase
2 Sobic.001G099000 expressed protein -
3 Sobic.002G081500 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
4 Sobic.003G439000 rubredoxin family protein, putative, expressed -
5 Sobic.003G386300 expressed protein -
6 Sobic.001G495300 expressed protein -
7 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
8 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
9 Sobic.002G109000 tetratricopeptide repeat containing protein, putative, expressed -
10 Sobic.006G155700 ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed -
11 Sobic.004G065300 CR084 protein, putative, expressed -
12 Sobic.003G162900 expressed protein -
13 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
14 Sobic.003G324700 expressed protein -
15 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
16 Sobic.010G202300 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
18 Sobic.002G013700 PPR2, putative, expressed -
19 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
20 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase


Gene co-expression network
sample Sobic004G040600 Sobic004G040600 Sobic006G047300 Sobic006G047300 Sobic004G040600--Sobic006G047300 Sobic001G099000 Sobic001G099000 Sobic004G040600--Sobic001G099000 Sobic002G081500 Sobic002G081500 Sobic004G040600--Sobic002G081500 Sobic003G439000 Sobic003G439000 Sobic004G040600--Sobic003G439000 Sobic003G386300 Sobic003G386300 Sobic004G040600--Sobic003G386300 Sobic001G495300 Sobic001G495300 Sobic004G040600--Sobic001G495300 Sobic001G489800 Sobic001G489800 Sobic004G040600--Sobic001G489800 Sobic001G168800 Sobic001G168800 Sobic004G040600--Sobic001G168800 Sobic002G109000 Sobic002G109000 Sobic004G040600--Sobic002G109000 Sobic006G047300--Sobic004G040600 Sobic006G091300 Sobic006G091300 Sobic006G047300--Sobic006G091300 Sobic001G460200 Sobic001G460200 Sobic006G047300--Sobic001G460200 Sobic004G015700 Sobic004G015700 Sobic006G047300--Sobic004G015700 Sobic003G225100 Sobic003G225100 Sobic006G047300--Sobic003G225100 Sobic006G111600 Sobic006G111600 Sobic006G047300--Sobic006G111600 Sobic003G267500 Sobic003G267500 Sobic006G047300--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic006G047300--Sobic007G015300 Sobic003G265500 Sobic003G265500 Sobic006G047300--Sobic003G265500 Sobic002G158800 Sobic002G158800 Sobic001G099000--Sobic002G158800 Sobic005G184300 Sobic005G184300 Sobic001G099000--Sobic005G184300 Sobic001G099000--Sobic007G015300 Sobic001G099000--Sobic002G081500 Sobic004G255500 Sobic004G255500 Sobic001G099000--Sobic004G255500 Sobic010G027200 Sobic010G027200 Sobic001G099000--Sobic010G027200 Sobic001G099000--Sobic002G109000 Sobic003G373300 Sobic003G373300 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic002G081500--Sobic001G099000 Sobic001G469933 Sobic001G469933 Sobic002G081500--Sobic001G469933 Sobic002G081500--Sobic005G184300 Sobic006G055800 Sobic006G055800 Sobic002G081500--Sobic006G055800 Sobic002G297400 Sobic002G297400 Sobic002G081500--Sobic002G297400 Sobic005G110400 Sobic005G110400 Sobic002G081500--Sobic005G110400 Sobic004G020800 Sobic004G020800 Sobic002G081500--Sobic004G020800 Sobic001G037500 Sobic001G037500 Sobic002G081500--Sobic001G037500 Sobic002G081500--Sobic002G158800 Sobic001G469900 Sobic001G469900 Sobic003G439000--Sobic001G469900 Sobic003G439000--Sobic001G469933 Sobic003G439000--Sobic001G168800 Sobic004G179200 Sobic004G179200 Sobic003G439000--Sobic004G179200 Sobic001G122400 Sobic001G122400 Sobic003G439000--Sobic001G122400 Sobic009G055800 Sobic009G055800 Sobic003G439000--Sobic009G055800 Sobic001G368500 Sobic001G368500 Sobic003G439000--Sobic001G368500 Sobic003G439000--Sobic002G297400 Sobic001G455500 Sobic001G455500 Sobic003G439000--Sobic001G455500 Sobic003G386300--Sobic001G122400 Sobic004G335800 Sobic004G335800 Sobic003G386300--Sobic004G335800 Sobic001G527100 Sobic001G527100 Sobic003G386300--Sobic001G527100 Sobic002G198000 Sobic002G198000 Sobic003G386300--Sobic002G198000 Sobic001G240000 Sobic001G240000 Sobic003G386300--Sobic001G240000 Sobic010G095200 Sobic010G095200 Sobic003G386300--Sobic010G095200 Sobic001G040000 Sobic001G040000 Sobic003G386300--Sobic001G040000 Sobic004G164100 Sobic004G164100 Sobic003G386300--Sobic004G164100 Sobic001G475600 Sobic001G475600 Sobic003G386300--Sobic001G475600 Sobic007G210600 Sobic007G210600 Sobic001G495300--Sobic007G210600 Sobic003G074700 Sobic003G074700 Sobic001G495300--Sobic003G074700 Sobic005G084000 Sobic005G084000 Sobic001G495300--Sobic005G084000 Sobic003G137100 Sobic003G137100 Sobic001G495300--Sobic003G137100 Sobic001G041800 Sobic001G041800 Sobic001G495300--Sobic001G041800 Sobic001G495300--Sobic002G109000 Sobic001G495300--Sobic001G099000 Sobic008G131700 Sobic008G131700 Sobic001G495300--Sobic008G131700 Sobic007G201400 Sobic007G201400 Sobic001G495300--Sobic007G201400 Sobic001G424300 Sobic001G424300 Sobic001G489800--Sobic001G424300 Sobic003G310100 Sobic003G310100 Sobic001G489800--Sobic003G310100 Sobic003G254600 Sobic003G254600 Sobic001G489800--Sobic003G254600 Sobic001G281500 Sobic001G281500 Sobic001G489800--Sobic001G281500 Sobic006G273400 Sobic006G273400 Sobic001G489800--Sobic006G273400 Sobic001G489800--Sobic002G081500 Sobic001G196200 Sobic001G196200 Sobic001G489800--Sobic001G196200 Sobic001G489800--Sobic002G297400 Sobic003G128400 Sobic003G128400 Sobic001G489800--Sobic003G128400 Sobic003G412900 Sobic003G412900 Sobic001G168800--Sobic003G412900 Sobic001G168800--Sobic003G439000 Sobic001G134700 Sobic001G134700 Sobic001G168800--Sobic001G134700 Sobic003G387100 Sobic003G387100 Sobic001G168800--Sobic003G387100 Sobic004G227200 Sobic004G227200 Sobic001G168800--Sobic004G227200 Sobic003G378600 Sobic003G378600 Sobic001G168800--Sobic003G378600 Sobic006G101500 Sobic006G101500 Sobic001G168800--Sobic006G101500 Sobic001G168800--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic001G168800--Sobic007G085800 Sobic002G109000--Sobic006G055800 Sobic002G109000--Sobic001G099000 Sobic002G109000--Sobic002G297400 Sobic002G109000--Sobic001G122400 Sobic003G324700 Sobic003G324700 Sobic002G109000--Sobic003G324700 Sobic002G109000--Sobic001G368500 Sobic003G045300 Sobic003G045300 Sobic002G109000--Sobic003G045300 Sobic002G109000--Sobic002G081500 Sobic002G109000--Sobic003G128400
Octagon: transcription factors


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