Gene annotation
Transcriptome id Sobic.001G168800.3,Sobic.001G168800.1,Sobic.001G168800.2
Synonym NPY2, Sb01g014760
Functional annotation BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
UniProt C5WT48
Pfam PF00651 PF03000
Panther DB PTHR32370 PTHR32370:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0009958positive gravitropism


Orthologs (automatic annotation)
TAIR AT2G14820 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os03g41350.1,LOC_Os03g41350.2 : BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
MaizeGDB (Corn) Zm00025a017313 , Zm00025a007416
Brachypodium KQK14215 , KQJ86117 , KQK14213 , KQK14214 , KQK14216 , KQJ86118
Barley HORVU4Hr1G069760.8 , HORVU4Hr1G069760.2 , HORVU4Hr1G069760.3 , HORVU4Hr1G069760.1 , HORVU4Hr1G069760.6 , HORVU4Hr1G069760.7 , HORVU4Hr1G069760.4 , HORVU4Hr1G069760.5 , HORVU4Hr1G069760.10 , HORVU4Hr1G069760.11 , HORVU4Hr1G069760.12 , HORVU4Hr1G069760.13 , HORVU4Hr1G069760.14 , HORVU4Hr1G069760.15 , HORVU4Hr1G069760.16 , HORVU4Hr1G069760.17
Wheat TraesCS4D02G077700 , TraesCS4D02G077700 , TraesCS5D02G082800 , TraesCS4A02G236100 , TraesCS4D02G077700 , TraesCS4B02G078900 , TraesCS4B02G078900 , TraesCS4B02G078900 , TraesCS4A02G236100 , TraesCS4A02G236100 , TraesCS5B02G076500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
2 Sobic.003G439000 rubredoxin family protein, putative, expressed -
3 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
4 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
5 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
6 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
7 Sobic.006G101500 expressed protein -
8 Sobic.001G469900 esterase/lipase/thioesterase, putative, expressed -
9 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
10 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
11 Sobic.001G005200 expressed protein -
12 Sobic.004G012900 expressed protein -
13 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
14 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
15 Sobic.001G175700 expressed protein -
16 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
17 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
19 Sobic.009G055800 expressed protein -
20 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase


Gene co-expression network
sample Sobic001G168800 Sobic001G168800 Sobic003G412900 Sobic003G412900 Sobic001G168800--Sobic003G412900 Sobic003G439000 Sobic003G439000 Sobic001G168800--Sobic003G439000 Sobic001G134700 Sobic001G134700 Sobic001G168800--Sobic001G134700 Sobic003G387100 Sobic003G387100 Sobic001G168800--Sobic003G387100 Sobic004G227200 Sobic004G227200 Sobic001G168800--Sobic004G227200 Sobic003G378600 Sobic003G378600 Sobic001G168800--Sobic003G378600 Sobic006G101500 Sobic006G101500 Sobic001G168800--Sobic006G101500 Sobic001G469900 Sobic001G469900 Sobic001G168800--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic001G168800--Sobic007G085800 Sobic001G069000 Sobic001G069000 Sobic003G412900--Sobic001G069000 Sobic003G412900--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic003G412900--Sobic001G314200 Sobic008G102000 Sobic008G102000 Sobic003G412900--Sobic008G102000 Sobic006G093900 Sobic006G093900 Sobic003G412900--Sobic006G093900 Sobic009G059300 Sobic009G059300 Sobic003G412900--Sobic009G059300 Sobic003G412900--Sobic001G168800 Sobic003G412900--Sobic006G101500 Sobic009G030900 Sobic009G030900 Sobic003G412900--Sobic009G030900 Sobic003G439000--Sobic001G469900 Sobic001G469933 Sobic001G469933 Sobic003G439000--Sobic001G469933 Sobic003G439000--Sobic001G168800 Sobic004G179200 Sobic004G179200 Sobic003G439000--Sobic004G179200 Sobic001G122400 Sobic001G122400 Sobic003G439000--Sobic001G122400 Sobic009G055800 Sobic009G055800 Sobic003G439000--Sobic009G055800 Sobic001G368500 Sobic001G368500 Sobic003G439000--Sobic001G368500 Sobic002G297400 Sobic002G297400 Sobic003G439000--Sobic002G297400 Sobic001G455500 Sobic001G455500 Sobic003G439000--Sobic001G455500 Sobic004G336200 Sobic004G336200 Sobic001G134700--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic001G134700--Sobic005G100300 Sobic003G160800 Sobic003G160800 Sobic001G134700--Sobic003G160800 Sobic008G006100 Sobic008G006100 Sobic001G134700--Sobic008G006100 Sobic001G134700--Sobic006G101500 Sobic001G500600 Sobic001G500600 Sobic001G134700--Sobic001G500600 Sobic008G073100 Sobic008G073100 Sobic001G134700--Sobic008G073100 Sobic005G110400 Sobic005G110400 Sobic001G134700--Sobic005G110400 Sobic001G134700--Sobic003G387100 Sobic003G387100--Sobic009G059300 Sobic003G387100--Sobic004G336200 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G387100--Sobic003G160800 Sobic003G387100--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G387100--Sobic004G012900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic007G223500 Sobic007G223500 Sobic004G227200--Sobic007G223500 Sobic004G227200--Sobic006G093900 Sobic002G316700 Sobic002G316700 Sobic004G227200--Sobic002G316700 Sobic001G035800 Sobic001G035800 Sobic004G227200--Sobic001G035800 Sobic009G143100 Sobic009G143100 Sobic004G227200--Sobic009G143100 Sobic004G227200--Sobic001G168800 Sobic004G175500 Sobic004G175500 Sobic004G227200--Sobic004G175500 Sobic003G387800 Sobic003G387800 Sobic004G227200--Sobic003G387800 Sobic002G030500 Sobic002G030500 Sobic004G227200--Sobic002G030500 Sobic009G140600 Sobic009G140600 Sobic003G378600--Sobic009G140600 Sobic001G005200 Sobic001G005200 Sobic003G378600--Sobic001G005200 Sobic003G378600--Sobic004G012900 Sobic003G378600--Sobic008G102000 Sobic001G122300 Sobic001G122300 Sobic003G378600--Sobic001G122300 Sobic004G239100 Sobic004G239100 Sobic003G378600--Sobic004G239100 Sobic004G359600 Sobic004G359600 Sobic003G378600--Sobic004G359600 Sobic002G233700 Sobic002G233700 Sobic003G378600--Sobic002G233700 Sobic008G172700 Sobic008G172700 Sobic003G378600--Sobic008G172700 Sobic006G101500--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic006G101500--Sobic002G102200 Sobic001G183000 Sobic001G183000 Sobic006G101500--Sobic001G183000 Sobic004G211600 Sobic004G211600 Sobic006G101500--Sobic004G211600 Sobic006G101500--Sobic001G134700 Sobic003G431700 Sobic003G431700 Sobic006G101500--Sobic003G431700 Sobic006G101500--Sobic003G412900 Sobic006G101500--Sobic006G093900 Sobic006G101500--Sobic008G006100 Sobic001G469900--Sobic003G439000 Sobic001G469900--Sobic009G055800 Sobic001G469900--Sobic001G469933 Sobic001G469900--Sobic001G168800 Sobic001G469900--Sobic004G179200 Sobic001G469900--Sobic001G183000 Sobic001G469900--Sobic001G134700 Sobic003G151500 Sobic003G151500 Sobic001G469900--Sobic003G151500 Sobic003G077400 Sobic003G077400 Sobic001G469900--Sobic003G077400 Sobic006G210400 Sobic006G210400 Sobic007G085800--Sobic006G210400 Sobic006G010900 Sobic006G010900 Sobic007G085800--Sobic006G010900 Sobic007G085800--Sobic003G412900 Sobic008G116300 Sobic008G116300 Sobic007G085800--Sobic008G116300 Sobic007G085800--Sobic001G069000 Sobic007G085800--Sobic003G387100 Sobic010G214100 Sobic010G214100 Sobic007G085800--Sobic010G214100 Sobic007G085800--Sobic001G168800 Sobic001G186200 Sobic001G186200 Sobic007G085800--Sobic001G186200
Octagon: transcription factors


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