Gene annotation
Transcriptome id Sobic.001G035800.1
Synonym Sb01g003340
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt C5WV23
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF16
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37390 : Chloroplast-targeted copper chaperone protein
RAP-DB (Rice) LOC_Os03g60480.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008791 , Zm00025a024557 , Zm00025a016441
Brachypodium KQK12453
Barley HORVU3Hr1G114920.2 , HORVU3Hr1G114920.3 , HORVU3Hr1G114920.4 , HORVU5Hr1G112560.1 , HORVU5Hr1G112560.2
Wheat TraesCS5B02G488200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G055800 expressed protein -
2 Sobic.001G417200 ATP synthase B chain, chloroplast precursor, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
3 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
4 Sobic.001G405700 - -
5 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
6 Sobic.003G254600 expressed protein -
7 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
8 Sobic.003G439000 rubredoxin family protein, putative, expressed -
9 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
10 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
11 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G371600 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.001G447700 expressed protein -
14 Sobic.002G227700 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.001G175700 expressed protein -
16 Sobic.003G433900 expressed protein -
17 Sobic.001G469900 esterase/lipase/thioesterase, putative, expressed -
18 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
19 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
20 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G035800 Sobic001G035800 Sobic009G055800 Sobic009G055800 Sobic001G035800--Sobic009G055800 Sobic001G417200 Sobic001G417200 Sobic001G035800--Sobic001G417200 Sobic004G227200 Sobic004G227200 Sobic001G035800--Sobic004G227200 Sobic001G405700 Sobic001G405700 Sobic001G035800--Sobic001G405700 Sobic006G093900 Sobic006G093900 Sobic001G035800--Sobic006G093900 Sobic003G254600 Sobic003G254600 Sobic001G035800--Sobic003G254600 Sobic003G412900 Sobic003G412900 Sobic001G035800--Sobic003G412900 Sobic003G439000 Sobic003G439000 Sobic001G035800--Sobic003G439000 Sobic001G168800 Sobic001G168800 Sobic001G035800--Sobic001G168800 Sobic001G469900 Sobic001G469900 Sobic009G055800--Sobic001G469900 Sobic009G055800--Sobic001G035800 Sobic003G077400 Sobic003G077400 Sobic009G055800--Sobic003G077400 Sobic009G164300 Sobic009G164300 Sobic009G055800--Sobic009G164300 Sobic009G055800--Sobic003G439000 Sobic009G055800--Sobic003G254600 Sobic008G062500 Sobic008G062500 Sobic009G055800--Sobic008G062500 Sobic009G055800--Sobic001G168800 Sobic001G469933 Sobic001G469933 Sobic009G055800--Sobic001G469933 Sobic009G143100 Sobic009G143100 Sobic001G417200--Sobic009G143100 Sobic007G071500 Sobic007G071500 Sobic001G417200--Sobic007G071500 Sobic002G316700 Sobic002G316700 Sobic001G417200--Sobic002G316700 Sobic007G223500 Sobic007G223500 Sobic001G417200--Sobic007G223500 Sobic001G417200--Sobic006G093900 Sobic001G417200--Sobic001G035800 Sobic003G387800 Sobic003G387800 Sobic001G417200--Sobic003G387800 Sobic001G029100 Sobic001G029100 Sobic001G417200--Sobic001G029100 Sobic007G004800 Sobic007G004800 Sobic001G417200--Sobic007G004800 Sobic004G227200--Sobic007G223500 Sobic004G227200--Sobic006G093900 Sobic004G227200--Sobic002G316700 Sobic004G227200--Sobic001G035800 Sobic004G227200--Sobic009G143100 Sobic004G227200--Sobic001G168800 Sobic004G175500 Sobic004G175500 Sobic004G227200--Sobic004G175500 Sobic004G227200--Sobic003G387800 Sobic002G030500 Sobic002G030500 Sobic004G227200--Sobic002G030500 Sobic005G194100 Sobic005G194100 Sobic001G405700--Sobic005G194100 Sobic007G052400 Sobic007G052400 Sobic001G405700--Sobic007G052400 Sobic010G005500 Sobic010G005500 Sobic001G405700--Sobic010G005500 Sobic009G030900 Sobic009G030900 Sobic001G405700--Sobic009G030900 Sobic001G175700 Sobic001G175700 Sobic001G405700--Sobic001G175700 Sobic004G012900 Sobic004G012900 Sobic001G405700--Sobic004G012900 Sobic008G171300 Sobic008G171300 Sobic001G405700--Sobic008G171300 Sobic004G239100 Sobic004G239100 Sobic001G405700--Sobic004G239100 Sobic002G227700 Sobic002G227700 Sobic001G405700--Sobic002G227700 Sobic006G093900--Sobic007G004800 Sobic009G140600 Sobic009G140600 Sobic006G093900--Sobic009G140600 Sobic006G093900--Sobic003G412900 Sobic006G093900--Sobic004G227200 Sobic001G519800 Sobic001G519800 Sobic006G093900--Sobic001G519800 Sobic009G043000 Sobic009G043000 Sobic006G093900--Sobic009G043000 Sobic001G102800 Sobic001G102800 Sobic006G093900--Sobic001G102800 Sobic008G102000 Sobic008G102000 Sobic006G093900--Sobic008G102000 Sobic003G002300 Sobic003G002300 Sobic006G093900--Sobic003G002300 Sobic001G196200 Sobic001G196200 Sobic003G254600--Sobic001G196200 Sobic003G254600--Sobic001G035800 Sobic006G107600 Sobic006G107600 Sobic003G254600--Sobic006G107600 Sobic003G421400 Sobic003G421400 Sobic003G254600--Sobic003G421400 Sobic003G254600--Sobic009G055800 Sobic001G489800 Sobic001G489800 Sobic003G254600--Sobic001G489800 Sobic001G447700 Sobic001G447700 Sobic003G254600--Sobic001G447700 Sobic003G254600--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic003G254600--Sobic007G085800 Sobic001G069000 Sobic001G069000 Sobic003G412900--Sobic001G069000 Sobic003G387100 Sobic003G387100 Sobic003G412900--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic003G412900--Sobic001G314200 Sobic003G412900--Sobic008G102000 Sobic003G412900--Sobic006G093900 Sobic009G059300 Sobic009G059300 Sobic003G412900--Sobic009G059300 Sobic003G412900--Sobic001G168800 Sobic006G101500 Sobic006G101500 Sobic003G412900--Sobic006G101500 Sobic003G412900--Sobic009G030900 Sobic003G439000--Sobic001G469900 Sobic003G439000--Sobic001G469933 Sobic003G439000--Sobic001G168800 Sobic004G179200 Sobic004G179200 Sobic003G439000--Sobic004G179200 Sobic001G122400 Sobic001G122400 Sobic003G439000--Sobic001G122400 Sobic003G439000--Sobic009G055800 Sobic001G368500 Sobic001G368500 Sobic003G439000--Sobic001G368500 Sobic002G297400 Sobic002G297400 Sobic003G439000--Sobic002G297400 Sobic001G455500 Sobic001G455500 Sobic003G439000--Sobic001G455500 Sobic001G168800--Sobic003G412900 Sobic001G168800--Sobic003G439000 Sobic001G134700 Sobic001G134700 Sobic001G168800--Sobic001G134700 Sobic001G168800--Sobic003G387100 Sobic001G168800--Sobic004G227200 Sobic003G378600 Sobic003G378600 Sobic001G168800--Sobic003G378600 Sobic001G168800--Sobic006G101500 Sobic001G168800--Sobic001G469900 Sobic001G168800--Sobic007G085800
Octagon: transcription factors


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