Gene annotation
Transcriptome id Sobic.004G227200.1
Synonym FTRA2
Functional annotation ferredoxin-thioredoxin reductase, variable chain, putative, expressed
UniProt A0A194YR44
Pfam PF02941
Panther DB PTHR10949 PTHR10949:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0015979; photosynthesis GO:0016992lipoate synthase activity GO:0009107lipoate biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G08410 : ferredoxin/thioredoxin reductase subunit A (variable subunit) 2
RAP-DB (Rice) LOC_Os04g44650.1 : ferredoxin-thioredoxin reductase, variable chain, putative, expressed
MaizeGDB (Corn) Zm00025a021008 , Zm00025a032102
Brachypodium -
Barley HORVU6Hr1G060100.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G223500 expressed protein -
2 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
3 Sobic.002G316700 ATP synthase subunit gamma(PubMedID : 26186930)@ATP synthase subunit gamma (Zm)(PubMedID : 27208977)@ATP synthase gamma chain, putative, expressed K02115: ATPF1G, F-type H+-transporting ATPase subunit gamma
4 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
5 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
6 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
7 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
8 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
9 Sobic.002G030500 Reticulon family protein(PubMedID : 26465154)@reticulon domain containing protein, putative, expressed -
10 Sobic.007G207800 thylakoid lumen protein, chloroplast precursor, putative, expressed -
11 Sobic.001G417200 ATP synthase B chain, chloroplast precursor, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
12 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G391900 nifU, putative, expressed -
14 Sobic.002G065200 pentatricopeptide, putative, expressed -
15 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.007G071500 photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed K03541: photosystem II 10kDa protein
17 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -
18 Sobic.001G517700 catalase domain containing protein, expressed K03781: katE, CAT, catB, catalase
19 Sobic.002G227700 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.008G134800 shikimate kinase, putative, expressed -


Gene co-expression network
sample Sobic004G227200 Sobic004G227200 Sobic007G223500 Sobic007G223500 Sobic004G227200--Sobic007G223500 Sobic006G093900 Sobic006G093900 Sobic004G227200--Sobic006G093900 Sobic002G316700 Sobic002G316700 Sobic004G227200--Sobic002G316700 Sobic001G035800 Sobic001G035800 Sobic004G227200--Sobic001G035800 Sobic009G143100 Sobic009G143100 Sobic004G227200--Sobic009G143100 Sobic001G168800 Sobic001G168800 Sobic004G227200--Sobic001G168800 Sobic004G175500 Sobic004G175500 Sobic004G227200--Sobic004G175500 Sobic003G387800 Sobic003G387800 Sobic004G227200--Sobic003G387800 Sobic002G030500 Sobic002G030500 Sobic004G227200--Sobic002G030500 Sobic007G223500--Sobic002G316700 Sobic007G207800 Sobic007G207800 Sobic007G223500--Sobic007G207800 Sobic007G223500--Sobic004G227200 Sobic008G134800 Sobic008G134800 Sobic007G223500--Sobic008G134800 Sobic007G223500--Sobic009G143100 Sobic001G425400 Sobic001G425400 Sobic007G223500--Sobic001G425400 Sobic007G071500 Sobic007G071500 Sobic007G223500--Sobic007G071500 Sobic007G223500--Sobic003G387800 Sobic008G066100 Sobic008G066100 Sobic007G223500--Sobic008G066100 Sobic007G004800 Sobic007G004800 Sobic006G093900--Sobic007G004800 Sobic009G140600 Sobic009G140600 Sobic006G093900--Sobic009G140600 Sobic003G412900 Sobic003G412900 Sobic006G093900--Sobic003G412900 Sobic006G093900--Sobic004G227200 Sobic001G519800 Sobic001G519800 Sobic006G093900--Sobic001G519800 Sobic009G043000 Sobic009G043000 Sobic006G093900--Sobic009G043000 Sobic001G102800 Sobic001G102800 Sobic006G093900--Sobic001G102800 Sobic008G102000 Sobic008G102000 Sobic006G093900--Sobic008G102000 Sobic003G002300 Sobic003G002300 Sobic006G093900--Sobic003G002300 Sobic002G316700--Sobic007G223500 Sobic002G316700--Sobic009G143100 Sobic002G316700--Sobic007G071500 Sobic003G209900 Sobic003G209900 Sobic002G316700--Sobic003G209900 Sobic002G316700--Sobic007G207800 Sobic008G063500 Sobic008G063500 Sobic002G316700--Sobic008G063500 Sobic002G316700--Sobic008G134800 Sobic001G177000 Sobic001G177000 Sobic002G316700--Sobic001G177000 Sobic004G056900 Sobic004G056900 Sobic002G316700--Sobic004G056900 Sobic009G055800 Sobic009G055800 Sobic001G035800--Sobic009G055800 Sobic001G417200 Sobic001G417200 Sobic001G035800--Sobic001G417200 Sobic001G035800--Sobic004G227200 Sobic001G405700 Sobic001G405700 Sobic001G035800--Sobic001G405700 Sobic001G035800--Sobic006G093900 Sobic003G254600 Sobic003G254600 Sobic001G035800--Sobic003G254600 Sobic001G035800--Sobic003G412900 Sobic003G439000 Sobic003G439000 Sobic001G035800--Sobic003G439000 Sobic001G035800--Sobic001G168800 Sobic009G143100--Sobic007G071500 Sobic009G143100--Sobic002G316700 Sobic009G143100--Sobic007G223500 Sobic009G143100--Sobic008G134800 Sobic009G143100--Sobic003G387800 Sobic009G143100--Sobic009G140600 Sobic009G143100--Sobic001G417200 Sobic006G105900 Sobic006G105900 Sobic009G143100--Sobic006G105900 Sobic004G249800 Sobic004G249800 Sobic009G143100--Sobic004G249800 Sobic001G168800--Sobic003G412900 Sobic001G168800--Sobic003G439000 Sobic001G134700 Sobic001G134700 Sobic001G168800--Sobic001G134700 Sobic003G387100 Sobic003G387100 Sobic001G168800--Sobic003G387100 Sobic001G168800--Sobic004G227200 Sobic003G378600 Sobic003G378600 Sobic001G168800--Sobic003G378600 Sobic006G101500 Sobic006G101500 Sobic001G168800--Sobic006G101500 Sobic001G469900 Sobic001G469900 Sobic001G168800--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic001G168800--Sobic007G085800 Sobic004G175500--Sobic003G387800 Sobic004G343300 Sobic004G343300 Sobic004G175500--Sobic004G343300 Sobic004G175500--Sobic007G004800 Sobic002G198600 Sobic002G198600 Sobic004G175500--Sobic002G198600 Sobic004G175500--Sobic004G249800 Sobic004G175500--Sobic007G071500 Sobic001G029100 Sobic001G029100 Sobic004G175500--Sobic001G029100 Sobic006G103400 Sobic006G103400 Sobic004G175500--Sobic006G103400 Sobic009G030900 Sobic009G030900 Sobic004G175500--Sobic009G030900 Sobic003G387800--Sobic004G175500 Sobic003G387800--Sobic007G004800 Sobic003G387800--Sobic003G002300 Sobic003G387800--Sobic009G140600 Sobic010G005500 Sobic010G005500 Sobic003G387800--Sobic010G005500 Sobic003G387800--Sobic009G030900 Sobic007G052400 Sobic007G052400 Sobic003G387800--Sobic007G052400 Sobic003G387800--Sobic009G143100 Sobic003G387800--Sobic008G134800 Sobic002G030500--Sobic007G207800 Sobic002G030500--Sobic008G066100 Sobic002G030500--Sobic007G223500 Sobic002G030500--Sobic002G316700 Sobic002G030500--Sobic007G071500 Sobic003G359100 Sobic003G359100 Sobic002G030500--Sobic003G359100 Sobic002G030500--Sobic008G134800 Sobic002G030500--Sobic006G093900 Sobic003G435800 Sobic003G435800 Sobic002G030500--Sobic003G435800
Octagon: transcription factors


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