Gene annotation
Transcriptome id Sobic.002G227700.3
Synonym Sb02g026790, CXE12, ATCXE12
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt A0A1W0W5K0
Pfam PF00135
Panther DB PTHR23024 PTHR23024:SF151
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os09g28620.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a047285
Brachypodium KQJ99981 , PNT64732
Barley HORVU5Hr1G069090.1 , HORVU6Hr1G005900.1 , HORVU5Hr1G068800.1 , HORVU5Hr1G068800.2 , HORVU5Hr1G068960.2 , HORVU5Hr1G068960.1 , HORVU0Hr1G013180.1 , HORVU2Hr1G067270.2
Wheat TraesCS5B02G240600 , TraesCS5A02G241900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G194100 expressed protein -
2 Sobic.001G405700 - -
3 Sobic.010G160700 PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
4 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
5 Sobic.001G417200 ATP synthase B chain, chloroplast precursor, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
6 Sobic.003G433900 expressed protein -
7 Sobic.003G022300 SOUL heme-binding protein, putative, expressed -
8 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
9 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
10 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
11 Sobic.001G221300 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
12 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
13 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
14 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
15 Sobic.001G010100 ankyrin repeat domain containing protein, expressed -
16 Sobic.010G011800 OsFBO18 - F-box and other domain containing protein, expressed -
17 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
18 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
20 Sobic.007G052400 rubredoxin family protein, putative, expressed -


Gene co-expression network
sample Sobic002G227700 Sobic002G227700 Sobic005G194100 Sobic005G194100 Sobic002G227700--Sobic005G194100 Sobic001G405700 Sobic001G405700 Sobic002G227700--Sobic001G405700 Sobic010G160700 Sobic010G160700 Sobic002G227700--Sobic010G160700 Sobic009G030900 Sobic009G030900 Sobic002G227700--Sobic009G030900 Sobic001G417200 Sobic001G417200 Sobic002G227700--Sobic001G417200 Sobic003G433900 Sobic003G433900 Sobic002G227700--Sobic003G433900 Sobic003G022300 Sobic003G022300 Sobic002G227700--Sobic003G022300 Sobic003G387800 Sobic003G387800 Sobic002G227700--Sobic003G387800 Sobic004G227200 Sobic004G227200 Sobic002G227700--Sobic004G227200 Sobic009G140600 Sobic009G140600 Sobic005G194100--Sobic009G140600 Sobic008G102000 Sobic008G102000 Sobic005G194100--Sobic008G102000 Sobic009G183700 Sobic009G183700 Sobic005G194100--Sobic009G183700 Sobic005G194100--Sobic010G160700 Sobic004G239100 Sobic004G239100 Sobic005G194100--Sobic004G239100 Sobic008G171300 Sobic008G171300 Sobic005G194100--Sobic008G171300 Sobic001G489000 Sobic001G489000 Sobic005G194100--Sobic001G489000 Sobic005G194100--Sobic003G387800 Sobic005G194100--Sobic009G030900 Sobic001G405700--Sobic005G194100 Sobic007G052400 Sobic007G052400 Sobic001G405700--Sobic007G052400 Sobic010G005500 Sobic010G005500 Sobic001G405700--Sobic010G005500 Sobic001G405700--Sobic009G030900 Sobic001G175700 Sobic001G175700 Sobic001G405700--Sobic001G175700 Sobic004G012900 Sobic004G012900 Sobic001G405700--Sobic004G012900 Sobic001G405700--Sobic008G171300 Sobic001G405700--Sobic004G239100 Sobic001G405700--Sobic002G227700 Sobic003G002300 Sobic003G002300 Sobic010G160700--Sobic003G002300 Sobic010G160700--Sobic007G052400 Sobic001G519800 Sobic001G519800 Sobic010G160700--Sobic001G519800 Sobic010G160700--Sobic003G387800 Sobic010G160700--Sobic010G005500 Sobic010G160700--Sobic009G140600 Sobic010G160700--Sobic005G194100 Sobic007G225500 Sobic007G225500 Sobic010G160700--Sobic007G225500 Sobic002G051100 Sobic002G051100 Sobic010G160700--Sobic002G051100 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G030900--Sobic009G183700 Sobic009G030900--Sobic003G387800 Sobic009G059300 Sobic009G059300 Sobic009G030900--Sobic009G059300 Sobic009G030900--Sobic003G002300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500 Sobic009G143100 Sobic009G143100 Sobic001G417200--Sobic009G143100 Sobic007G071500 Sobic007G071500 Sobic001G417200--Sobic007G071500 Sobic002G316700 Sobic002G316700 Sobic001G417200--Sobic002G316700 Sobic007G223500 Sobic007G223500 Sobic001G417200--Sobic007G223500 Sobic006G093900 Sobic006G093900 Sobic001G417200--Sobic006G093900 Sobic001G035800 Sobic001G035800 Sobic001G417200--Sobic001G035800 Sobic001G417200--Sobic003G387800 Sobic001G029100 Sobic001G029100 Sobic001G417200--Sobic001G029100 Sobic007G004800 Sobic007G004800 Sobic001G417200--Sobic007G004800 Sobic002G198600 Sobic002G198600 Sobic003G433900--Sobic002G198600 Sobic003G132100 Sobic003G132100 Sobic003G433900--Sobic003G132100 Sobic009G091850 Sobic009G091850 Sobic003G433900--Sobic009G091850 Sobic009G130700 Sobic009G130700 Sobic003G433900--Sobic009G130700 Sobic008G051000 Sobic008G051000 Sobic003G433900--Sobic008G051000 Sobic009G091800 Sobic009G091800 Sobic003G433900--Sobic009G091800 Sobic004G238500 Sobic004G238500 Sobic003G433900--Sobic004G238500 Sobic002G297300 Sobic002G297300 Sobic003G433900--Sobic002G297300 Sobic002G033800 Sobic002G033800 Sobic003G433900--Sobic002G033800 Sobic003G022300--Sobic002G227700 Sobic004G020300 Sobic004G020300 Sobic003G022300--Sobic004G020300 Sobic001G221300 Sobic001G221300 Sobic003G022300--Sobic001G221300 Sobic001G295300 Sobic001G295300 Sobic003G022300--Sobic001G295300 Sobic009G210200 Sobic009G210200 Sobic003G022300--Sobic009G210200 Sobic001G033100 Sobic001G033100 Sobic003G022300--Sobic001G033100 Sobic006G067400 Sobic006G067400 Sobic003G022300--Sobic006G067400 Sobic004G343900 Sobic004G343900 Sobic003G022300--Sobic004G343900 Sobic007G004700 Sobic007G004700 Sobic003G022300--Sobic007G004700 Sobic003G387800--Sobic004G175500 Sobic003G387800--Sobic007G004800 Sobic003G387800--Sobic003G002300 Sobic003G387800--Sobic009G140600 Sobic003G387800--Sobic010G005500 Sobic003G387800--Sobic009G030900 Sobic003G387800--Sobic007G052400 Sobic003G387800--Sobic009G143100 Sobic008G134800 Sobic008G134800 Sobic003G387800--Sobic008G134800 Sobic004G227200--Sobic007G223500 Sobic004G227200--Sobic006G093900 Sobic004G227200--Sobic002G316700 Sobic004G227200--Sobic001G035800 Sobic004G227200--Sobic009G143100 Sobic001G168800 Sobic001G168800 Sobic004G227200--Sobic001G168800 Sobic004G227200--Sobic004G175500 Sobic004G227200--Sobic003G387800 Sobic002G030500 Sobic002G030500 Sobic004G227200--Sobic002G030500
Octagon: transcription factors


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