Gene annotation
Transcriptome id Sobic.003G412900.2
Synonym NDH18, Sb03g044730,
Functional annotation NAD(P)H dehydrogenase 18 (PubMedID : 26465154)
Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32 (PubMedID : 28624908)
expressed protein
UniProt A0A1W0W1C4
Pfam -
Panther DB PTHR36399 PTHR36399:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43750 : NAD(P)H dehydrogenase 18
RAP-DB (Rice) LOC_Os01g70400.1 : expressed protein
MaizeGDB (Corn) Zm00025a026174
Brachypodium KQK11334 , PNT73515
Barley HORVU1Hr1G024890.1 , HORVU3Hr1G096650.26 , HORVU3Hr1G096650.27 , HORVU3Hr1G096650.24 , HORVU3Hr1G096650.25 , HORVU3Hr1G096650.28 , HORVU3Hr1G096650.29
Wheat TraesCS3D02G436100 , TraesCS3B02G477300 , TraesCS3A02G443700
Populus -


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cDNA sequences
Sobic.003G412900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
2 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
3 Sobic.001G314200 expressed protein -
4 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
5 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
6 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
7 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
8 Sobic.006G101500 expressed protein -
9 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
10 Sobic.004G308700 photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08911: light-harvesting complex I chlorophyll a/b binding protein 5
11 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
12 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
13 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
14 Sobic.001G005200 expressed protein -
15 Sobic.003G371600 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -
18 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
19 Sobic.008G188600 glyoxalase family protein, putative, expressed -
20 Sobic.007G052400 rubredoxin family protein, putative, expressed -


Gene co-expression network
sample Sobic003G412900 Sobic003G412900 Sobic001G069000 Sobic001G069000 Sobic003G412900--Sobic001G069000 Sobic003G387100 Sobic003G387100 Sobic003G412900--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic003G412900--Sobic001G314200 Sobic008G102000 Sobic008G102000 Sobic003G412900--Sobic008G102000 Sobic006G093900 Sobic006G093900 Sobic003G412900--Sobic006G093900 Sobic009G059300 Sobic009G059300 Sobic003G412900--Sobic009G059300 Sobic001G168800 Sobic001G168800 Sobic003G412900--Sobic001G168800 Sobic006G101500 Sobic006G101500 Sobic003G412900--Sobic006G101500 Sobic009G030900 Sobic009G030900 Sobic003G412900--Sobic009G030900 Sobic001G069000--Sobic003G412900 Sobic009G125400 Sobic009G125400 Sobic001G069000--Sobic009G125400 Sobic002G098800 Sobic002G098800 Sobic001G069000--Sobic002G098800 Sobic006G010900 Sobic006G010900 Sobic001G069000--Sobic006G010900 Sobic001G536800 Sobic001G536800 Sobic001G069000--Sobic001G536800 Sobic004G308700 Sobic004G308700 Sobic001G069000--Sobic004G308700 Sobic001G069000--Sobic003G387100 Sobic001G069000--Sobic001G314200 Sobic004G272100 Sobic004G272100 Sobic001G069000--Sobic004G272100 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G387100--Sobic004G012900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic001G314200--Sobic003G412900 Sobic001G314200--Sobic009G030900 Sobic001G314200--Sobic001G069000 Sobic006G067400 Sobic006G067400 Sobic001G314200--Sobic006G067400 Sobic001G314200--Sobic003G387100 Sobic001G314200--Sobic006G093900 Sobic001G314200--Sobic009G059300 Sobic008G171300 Sobic008G171300 Sobic001G314200--Sobic008G171300 Sobic008G188600 Sobic008G188600 Sobic001G314200--Sobic008G188600 Sobic003G002300 Sobic003G002300 Sobic008G102000--Sobic003G002300 Sobic009G140600 Sobic009G140600 Sobic008G102000--Sobic009G140600 Sobic009G043000 Sobic009G043000 Sobic008G102000--Sobic009G043000 Sobic007G225500 Sobic007G225500 Sobic008G102000--Sobic007G225500 Sobic002G051100 Sobic002G051100 Sobic008G102000--Sobic002G051100 Sobic008G102000--Sobic004G272100 Sobic007G173800 Sobic007G173800 Sobic008G102000--Sobic007G173800 Sobic007G052400 Sobic007G052400 Sobic008G102000--Sobic007G052400 Sobic003G378600 Sobic003G378600 Sobic008G102000--Sobic003G378600 Sobic007G004800 Sobic007G004800 Sobic006G093900--Sobic007G004800 Sobic006G093900--Sobic009G140600 Sobic006G093900--Sobic003G412900 Sobic004G227200 Sobic004G227200 Sobic006G093900--Sobic004G227200 Sobic001G519800 Sobic001G519800 Sobic006G093900--Sobic001G519800 Sobic006G093900--Sobic009G043000 Sobic001G102800 Sobic001G102800 Sobic006G093900--Sobic001G102800 Sobic006G093900--Sobic008G102000 Sobic006G093900--Sobic003G002300 Sobic009G059300--Sobic003G387100 Sobic009G059300--Sobic004G012900 Sobic010G005500 Sobic010G005500 Sobic009G059300--Sobic010G005500 Sobic009G059300--Sobic006G207800 Sobic009G059300--Sobic008G171300 Sobic001G309300 Sobic001G309300 Sobic009G059300--Sobic001G309300 Sobic009G059300--Sobic007G052400 Sobic009G059300--Sobic009G030900 Sobic009G059300--Sobic008G073100 Sobic001G168800--Sobic003G412900 Sobic003G439000 Sobic003G439000 Sobic001G168800--Sobic003G439000 Sobic001G134700 Sobic001G134700 Sobic001G168800--Sobic001G134700 Sobic001G168800--Sobic003G387100 Sobic001G168800--Sobic004G227200 Sobic001G168800--Sobic003G378600 Sobic001G168800--Sobic006G101500 Sobic001G469900 Sobic001G469900 Sobic001G168800--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic001G168800--Sobic007G085800 Sobic006G101500--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic006G101500--Sobic002G102200 Sobic001G183000 Sobic001G183000 Sobic006G101500--Sobic001G183000 Sobic004G211600 Sobic004G211600 Sobic006G101500--Sobic004G211600 Sobic006G101500--Sobic001G134700 Sobic003G431700 Sobic003G431700 Sobic006G101500--Sobic003G431700 Sobic006G101500--Sobic003G412900 Sobic006G101500--Sobic006G093900 Sobic008G006100 Sobic008G006100 Sobic006G101500--Sobic008G006100 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G183700 Sobic009G183700 Sobic009G030900--Sobic009G183700 Sobic003G387800 Sobic003G387800 Sobic009G030900--Sobic003G387800 Sobic009G030900--Sobic009G059300 Sobic009G030900--Sobic003G002300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500
Octagon: transcription factors


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