Gene annotation
Transcriptome id Sobic.006G101500.2,Sobic.006G101500.1
Synonym Sb06g018500, NDF6
Functional annotation expressed protein
UniProt A0A1B6PL99 , C5Y9P5
Pfam -
Panther DB PTHR36315 PTHR36315:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18730 : NDH dependent flow 6
RAP-DB (Rice) LOC_Os02g51020.1 : expressed protein
MaizeGDB (Corn) Zm00025a022025
Brachypodium KQK01955 , KQK01956
Barley HORVU6Hr1G076040.1 , HORVU6Hr1G076040.2
Wheat TraesCS6B02G336800 , TraesCS6A02G308100 , TraesCS6D02G287300
Populus -


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cDNA sequences
Sobic.006G101500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
2 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.001G183000 peptidase M50 family protein, putative, expressed -
4 Sobic.004G211600 psaB translation factor, putative, expressed -
5 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
6 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
7 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
8 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
9 Sobic.008G006100 MATE efflux protein, putative, expressed -
10 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
11 Sobic.010G214100 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase
12 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
13 Sobic.001G124800 expressed protein -
14 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
15 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
16 Sobic.010G035400 expressed protein -
17 Sobic.008G116300 expressed protein -
18 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
19 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
20 Sobic.001G102800 expressed protein -


Gene co-expression network
sample Sobic006G101500 Sobic006G101500 Sobic003G387100 Sobic003G387100 Sobic006G101500--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic006G101500--Sobic002G102200 Sobic001G183000 Sobic001G183000 Sobic006G101500--Sobic001G183000 Sobic004G211600 Sobic004G211600 Sobic006G101500--Sobic004G211600 Sobic001G134700 Sobic001G134700 Sobic006G101500--Sobic001G134700 Sobic003G431700 Sobic003G431700 Sobic006G101500--Sobic003G431700 Sobic003G412900 Sobic003G412900 Sobic006G101500--Sobic003G412900 Sobic006G093900 Sobic006G093900 Sobic006G101500--Sobic006G093900 Sobic008G006100 Sobic008G006100 Sobic006G101500--Sobic008G006100 Sobic009G059300 Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G387100--Sobic004G012900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic002G102200--Sobic006G101500 Sobic001G391900 Sobic001G391900 Sobic002G102200--Sobic001G391900 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic010G058200 Sobic010G058200 Sobic002G102200--Sobic010G058200 Sobic006G050400 Sobic006G050400 Sobic002G102200--Sobic006G050400 Sobic002G102200--Sobic008G006100 Sobic008G063200 Sobic008G063200 Sobic002G102200--Sobic008G063200 Sobic002G102200--Sobic009G059300 Sobic001G183000--Sobic006G101500 Sobic002G258600 Sobic002G258600 Sobic001G183000--Sobic002G258600 Sobic009G237000 Sobic009G237000 Sobic001G183000--Sobic009G237000 Sobic001G183000--Sobic001G134700 Sobic001G183000--Sobic004G211600 Sobic001G183000--Sobic008G006100 Sobic001G183000--Sobic003G160800 Sobic001G521200 Sobic001G521200 Sobic001G183000--Sobic001G521200 Sobic005G001700 Sobic005G001700 Sobic001G183000--Sobic005G001700 Sobic004G211600--Sobic006G101500 Sobic005G063000 Sobic005G063000 Sobic004G211600--Sobic005G063000 Sobic004G211600--Sobic001G183000 Sobic010G214100 Sobic010G214100 Sobic004G211600--Sobic010G214100 Sobic004G211600--Sobic008G006100 Sobic004G211600--Sobic001G134700 Sobic009G062400 Sobic009G062400 Sobic004G211600--Sobic009G062400 Sobic004G298900 Sobic004G298900 Sobic004G211600--Sobic004G298900 Sobic004G211600--Sobic003G160800 Sobic001G134700--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic001G134700--Sobic005G100300 Sobic001G134700--Sobic003G160800 Sobic001G134700--Sobic008G006100 Sobic001G134700--Sobic006G101500 Sobic001G500600 Sobic001G500600 Sobic001G134700--Sobic001G500600 Sobic001G134700--Sobic008G073100 Sobic001G134700--Sobic005G110400 Sobic001G134700--Sobic003G387100 Sobic001G519800 Sobic001G519800 Sobic003G431700--Sobic001G519800 Sobic003G398800 Sobic003G398800 Sobic003G431700--Sobic003G398800 Sobic003G431700--Sobic006G207800 Sobic002G370600 Sobic002G370600 Sobic003G431700--Sobic002G370600 Sobic006G238200 Sobic006G238200 Sobic003G431700--Sobic006G238200 Sobic004G308700 Sobic004G308700 Sobic003G431700--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431700--Sobic004G272100 Sobic010G181300 Sobic010G181300 Sobic003G431700--Sobic010G181300 Sobic001G102800 Sobic001G102800 Sobic003G431700--Sobic001G102800 Sobic001G069000 Sobic001G069000 Sobic003G412900--Sobic001G069000 Sobic003G412900--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic003G412900--Sobic001G314200 Sobic008G102000 Sobic008G102000 Sobic003G412900--Sobic008G102000 Sobic003G412900--Sobic006G093900 Sobic003G412900--Sobic009G059300 Sobic001G168800 Sobic001G168800 Sobic003G412900--Sobic001G168800 Sobic003G412900--Sobic006G101500 Sobic009G030900 Sobic009G030900 Sobic003G412900--Sobic009G030900 Sobic007G004800 Sobic007G004800 Sobic006G093900--Sobic007G004800 Sobic009G140600 Sobic009G140600 Sobic006G093900--Sobic009G140600 Sobic006G093900--Sobic003G412900 Sobic004G227200 Sobic004G227200 Sobic006G093900--Sobic004G227200 Sobic006G093900--Sobic001G519800 Sobic009G043000 Sobic009G043000 Sobic006G093900--Sobic009G043000 Sobic006G093900--Sobic001G102800 Sobic006G093900--Sobic008G102000 Sobic003G002300 Sobic003G002300 Sobic006G093900--Sobic003G002300 Sobic002G112400 Sobic002G112400 Sobic008G006100--Sobic002G112400 Sobic001G128600 Sobic001G128600 Sobic008G006100--Sobic001G128600 Sobic008G006100--Sobic009G062400 Sobic008G006100--Sobic001G500600 Sobic003G070900 Sobic003G070900 Sobic008G006100--Sobic003G070900 Sobic008G006100--Sobic009G237000 Sobic008G006100--Sobic001G134700 Sobic003G233700 Sobic003G233700 Sobic008G006100--Sobic003G233700 Sobic007G103400 Sobic007G103400 Sobic008G006100--Sobic007G103400
Octagon: transcription factors


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