Gene annotation
Transcriptome id Sobic.001G183000.1
Synonym Sb01g015910
Functional annotation peptidase M50 family protein, putative, expressed
UniProt C5WUA3
Pfam PF13180 PF02163
Panther DB PTHR22939 PTHR22939:SF97
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006508proteolysis GO:0004222metalloendopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G32480 : ARABIDOPSIS SERIN PROTEASE
RAP-DB (Rice) LOC_Os03g38230.1 : peptidase M50 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007100 , Zm00025a017366
Brachypodium KQK14341
Barley HORVU2Hr1G021920.1
Wheat TraesCS2D02G127200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G101500 expressed protein -
2 Sobic.002G258600 expressed protein -
3 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
4 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
5 Sobic.004G211600 psaB translation factor, putative, expressed -
6 Sobic.008G006100 MATE efflux protein, putative, expressed -
7 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.001G521200 expressed protein -
9 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
10 Sobic.005G063000 short chain dehydrogenase/reductase protein, putative, expressed -
11 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
12 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
13 Sobic.003G085100 MYB family transcription factor, putative, expressed -
14 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
15 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
16 Sobic.007G103400 expressed protein -
17 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
18 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
19 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
20 Sobic.005G100300 OsClp12 - Putative Clp protease homologue, expressed -


Gene co-expression network
sample Sobic001G183000 Sobic001G183000 Sobic006G101500 Sobic006G101500 Sobic001G183000--Sobic006G101500 Sobic002G258600 Sobic002G258600 Sobic001G183000--Sobic002G258600 Sobic009G237000 Sobic009G237000 Sobic001G183000--Sobic009G237000 Sobic001G134700 Sobic001G134700 Sobic001G183000--Sobic001G134700 Sobic004G211600 Sobic004G211600 Sobic001G183000--Sobic004G211600 Sobic008G006100 Sobic008G006100 Sobic001G183000--Sobic008G006100 Sobic003G160800 Sobic003G160800 Sobic001G183000--Sobic003G160800 Sobic001G521200 Sobic001G521200 Sobic001G183000--Sobic001G521200 Sobic005G001700 Sobic005G001700 Sobic001G183000--Sobic005G001700 Sobic003G387100 Sobic003G387100 Sobic006G101500--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic006G101500--Sobic002G102200 Sobic006G101500--Sobic001G183000 Sobic006G101500--Sobic004G211600 Sobic006G101500--Sobic001G134700 Sobic003G431700 Sobic003G431700 Sobic006G101500--Sobic003G431700 Sobic003G412900 Sobic003G412900 Sobic006G101500--Sobic003G412900 Sobic006G093900 Sobic006G093900 Sobic006G101500--Sobic006G093900 Sobic006G101500--Sobic008G006100 Sobic008G074000 Sobic008G074000 Sobic002G258600--Sobic008G074000 Sobic002G258600--Sobic001G183000 Sobic004G019800 Sobic004G019800 Sobic002G258600--Sobic004G019800 Sobic009G024300 Sobic009G024300 Sobic002G258600--Sobic009G024300 Sobic002G258600--Sobic009G237000 Sobic002G118200 Sobic002G118200 Sobic002G258600--Sobic002G118200 Sobic001G516901 Sobic001G516901 Sobic002G258600--Sobic001G516901 Sobic007G162600 Sobic007G162600 Sobic002G258600--Sobic007G162600 Sobic003G287900 Sobic003G287900 Sobic002G258600--Sobic003G287900 Sobic007G103400 Sobic007G103400 Sobic009G237000--Sobic007G103400 Sobic004G353100 Sobic004G353100 Sobic009G237000--Sobic004G353100 Sobic006G102000 Sobic006G102000 Sobic009G237000--Sobic006G102000 Sobic002G298800 Sobic002G298800 Sobic009G237000--Sobic002G298800 Sobic010G035400 Sobic010G035400 Sobic009G237000--Sobic010G035400 Sobic001G504400 Sobic001G504400 Sobic009G237000--Sobic001G504400 Sobic003G233700 Sobic003G233700 Sobic009G237000--Sobic003G233700 Sobic007G108900 Sobic007G108900 Sobic009G237000--Sobic007G108900 Sobic009G237000--Sobic008G074000 Sobic004G336200 Sobic004G336200 Sobic001G134700--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic001G134700--Sobic005G100300 Sobic001G134700--Sobic003G160800 Sobic001G134700--Sobic008G006100 Sobic001G134700--Sobic006G101500 Sobic001G500600 Sobic001G500600 Sobic001G134700--Sobic001G500600 Sobic008G073100 Sobic008G073100 Sobic001G134700--Sobic008G073100 Sobic005G110400 Sobic005G110400 Sobic001G134700--Sobic005G110400 Sobic001G134700--Sobic003G387100 Sobic004G211600--Sobic006G101500 Sobic005G063000 Sobic005G063000 Sobic004G211600--Sobic005G063000 Sobic004G211600--Sobic001G183000 Sobic010G214100 Sobic010G214100 Sobic004G211600--Sobic010G214100 Sobic004G211600--Sobic008G006100 Sobic004G211600--Sobic001G134700 Sobic009G062400 Sobic009G062400 Sobic004G211600--Sobic009G062400 Sobic004G298900 Sobic004G298900 Sobic004G211600--Sobic004G298900 Sobic004G211600--Sobic003G160800 Sobic002G112400 Sobic002G112400 Sobic008G006100--Sobic002G112400 Sobic001G128600 Sobic001G128600 Sobic008G006100--Sobic001G128600 Sobic008G006100--Sobic009G062400 Sobic008G006100--Sobic001G500600 Sobic003G070900 Sobic003G070900 Sobic008G006100--Sobic003G070900 Sobic008G006100--Sobic009G237000 Sobic008G006100--Sobic001G134700 Sobic008G006100--Sobic003G233700 Sobic008G006100--Sobic007G103400 Sobic003G160800--Sobic004G336200 Sobic003G160800--Sobic005G100300 Sobic003G160800--Sobic010G035400 Sobic003G160800--Sobic003G387100 Sobic003G160800--Sobic007G103400 Sobic003G160800--Sobic002G112400 Sobic003G160800--Sobic003G233700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500 Sobic001G521200--Sobic001G183000 Sobic001G521200--Sobic008G006100 Sobic003G037300 Sobic003G037300 Sobic001G521200--Sobic003G037300 Sobic001G521200--Sobic003G233700 Sobic002G402700 Sobic002G402700 Sobic001G521200--Sobic002G402700 Sobic004G006400 Sobic004G006400 Sobic001G521200--Sobic004G006400 Sobic002G133900 Sobic002G133900 Sobic001G521200--Sobic002G133900 Sobic001G521200--Sobic005G100300 Sobic001G521200--Sobic009G062400 Sobic008G001900 Sobic008G001900 Sobic005G001700--Sobic008G001900 Sobic002G220900 Sobic002G220900 Sobic005G001700--Sobic002G220900 Sobic005G204200 Sobic005G204200 Sobic005G001700--Sobic005G204200 Sobic010G067100 Sobic010G067100 Sobic005G001700--Sobic010G067100 Sobic005G001700--Sobic005G063000 Sobic003G185900 Sobic003G185900 Sobic005G001700--Sobic003G185900 Sobic005G001700--Sobic002G402700 Sobic003G036200 Sobic003G036200 Sobic005G001700--Sobic003G036200 Sobic007G009200 Sobic007G009200 Sobic005G001700--Sobic007G009200
Octagon: transcription factors


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