Gene annotation
Transcriptome id Sobic.002G133900.2
Synonym Sb02g011900
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1W0W3V6
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF7
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27680 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os09g39390.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a013496
Brachypodium KQJ91577 , PNT65195 , PNT65194
Barley -
Wheat TraesCS4B02G010400 , TraesCS4A02G303400 , TraesCS4A02G303400 , TraesCS4B02G010400 , TraesCS4D02G009100 , TraesCS4D02G009100
Populus -


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cDNA sequences
Sobic.002G133900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
2 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
3 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
4 Sobic.002G405100 elongation factor TS family protein, expressed K02357: tsf, elongation factor Ts
5 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
6 Sobic.005G100300 OsClp12 - Putative Clp protease homologue, expressed -
7 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
8 Sobic.007G103400 expressed protein -
9 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
10 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
11 Sobic.003G233700 SET domain-containing protein, putative, expressed -
12 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
13 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
14 Sobic.010G035400 expressed protein -
15 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
16 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
17 Sobic.009G132000 expressed protein -
18 Sobic.010G201600 tic21, putative, expressed -
19 Sobic.008G006100 MATE efflux protein, putative, expressed -
20 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin


Gene co-expression network
sample Sobic002G133900 Sobic002G133900 Sobic003G070900 Sobic003G070900 Sobic002G133900--Sobic003G070900 Sobic003G094350 Sobic003G094350 Sobic002G133900--Sobic003G094350 Sobic003G287900 Sobic003G287900 Sobic002G133900--Sobic003G287900 Sobic002G405100 Sobic002G405100 Sobic002G133900--Sobic002G405100 Sobic004G353100 Sobic004G353100 Sobic002G133900--Sobic004G353100 Sobic005G100300 Sobic005G100300 Sobic002G133900--Sobic005G100300 Sobic002G028400 Sobic002G028400 Sobic002G133900--Sobic002G028400 Sobic007G103400 Sobic007G103400 Sobic002G133900--Sobic007G103400 Sobic009G170200 Sobic009G170200 Sobic002G133900--Sobic009G170200 Sobic003G070900--Sobic002G133900 Sobic003G070900--Sobic003G287900 Sobic003G070900--Sobic009G170200 Sobic003G070900--Sobic003G094350 Sobic001G118400 Sobic001G118400 Sobic003G070900--Sobic001G118400 Sobic001G500600 Sobic001G500600 Sobic003G070900--Sobic001G500600 Sobic003G070900--Sobic004G353100 Sobic008G074000 Sobic008G074000 Sobic003G070900--Sobic008G074000 Sobic008G006100 Sobic008G006100 Sobic003G070900--Sobic008G006100 Sobic003G094350--Sobic002G133900 Sobic003G094350--Sobic003G070900 Sobic003G094350--Sobic001G500600 Sobic003G094350--Sobic003G287900 Sobic003G094350--Sobic005G100300 Sobic003G094350--Sobic002G028400 Sobic004G336200 Sobic004G336200 Sobic003G094350--Sobic004G336200 Sobic010G002000 Sobic010G002000 Sobic003G094350--Sobic010G002000 Sobic003G094350--Sobic004G353100 Sobic003G287900--Sobic003G070900 Sobic003G287900--Sobic002G133900 Sobic003G287900--Sobic003G094350 Sobic003G233700 Sobic003G233700 Sobic003G287900--Sobic003G233700 Sobic003G287900--Sobic001G500600 Sobic003G287900--Sobic004G353100 Sobic003G287900--Sobic004G336200 Sobic003G287900--Sobic008G074000 Sobic003G287900--Sobic009G170200 Sobic002G405100--Sobic002G133900 Sobic002G405100--Sobic005G100300 Sobic002G401800 Sobic002G401800 Sobic002G405100--Sobic002G401800 Sobic002G405100--Sobic004G353100 Sobic010G035400 Sobic010G035400 Sobic002G405100--Sobic010G035400 Sobic010G201600 Sobic010G201600 Sobic002G405100--Sobic010G201600 Sobic002G405100--Sobic003G094350 Sobic002G405100--Sobic004G336200 Sobic007G052400 Sobic007G052400 Sobic002G405100--Sobic007G052400 Sobic004G353100--Sobic007G103400 Sobic009G237000 Sobic009G237000 Sobic004G353100--Sobic009G237000 Sobic004G353100--Sobic002G133900 Sobic002G298800 Sobic002G298800 Sobic004G353100--Sobic002G298800 Sobic004G353100--Sobic010G035400 Sobic004G353100--Sobic003G070900 Sobic004G353100--Sobic003G233700 Sobic009G132000 Sobic009G132000 Sobic004G353100--Sobic009G132000 Sobic004G353100--Sobic009G170200 Sobic005G100300--Sobic002G405100 Sobic005G100300--Sobic002G133900 Sobic005G100300--Sobic010G201600 Sobic005G100300--Sobic003G094350 Sobic003G160800 Sobic003G160800 Sobic005G100300--Sobic003G160800 Sobic001G128600 Sobic001G128600 Sobic005G100300--Sobic001G128600 Sobic005G100300--Sobic002G401800 Sobic001G134700 Sobic001G134700 Sobic005G100300--Sobic001G134700 Sobic005G100300--Sobic004G353100 Sobic002G028400--Sobic002G133900 Sobic002G028400--Sobic003G094350 Sobic002G028400--Sobic001G500600 Sobic002G028400--Sobic003G070900 Sobic002G028400--Sobic009G170200 Sobic002G028400--Sobic008G074000 Sobic001G540600 Sobic001G540600 Sobic002G028400--Sobic001G540600 Sobic002G028400--Sobic003G287900 Sobic002G028400--Sobic007G103400 Sobic007G103400--Sobic009G237000 Sobic007G103400--Sobic002G298800 Sobic007G103400--Sobic004G353100 Sobic007G103400--Sobic010G035400 Sobic001G504400 Sobic001G504400 Sobic007G103400--Sobic001G504400 Sobic003G306200 Sobic003G306200 Sobic007G103400--Sobic003G306200 Sobic002G198300 Sobic002G198300 Sobic007G103400--Sobic002G198300 Sobic007G103400--Sobic003G233700 Sobic002G275300 Sobic002G275300 Sobic007G103400--Sobic002G275300 Sobic009G170200--Sobic003G070900 Sobic006G232600 Sobic006G232600 Sobic009G170200--Sobic006G232600 Sobic007G087100 Sobic007G087100 Sobic009G170200--Sobic007G087100 Sobic004G103300 Sobic004G103300 Sobic009G170200--Sobic004G103300 Sobic009G170200--Sobic002G133900 Sobic001G077300 Sobic001G077300 Sobic009G170200--Sobic001G077300 Sobic009G170200--Sobic004G353100 Sobic001G378100 Sobic001G378100 Sobic009G170200--Sobic001G378100 Sobic009G170200--Sobic007G103400
Octagon: transcription factors


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