Gene annotation
Transcriptome id Sobic.010G201600.1
Synonym TIC21, CIA5, Sb10g024970, ATTIC21, PIC1
Functional annotation tic21, putative, expressed
UniProt C5Z6L3
Pfam PF12263
Panther DB PTHR34548 PTHR34548:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G15290 : translocon at inner membrane of chloroplasts 21
RAP-DB (Rice) LOC_Os06g43130.1 : tic21, putative, expressed
MaizeGDB (Corn) Zm00025a051430
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G201600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G100300 OsClp12 - Putative Clp protease homologue, expressed -
2 Sobic.002G405100 elongation factor TS family protein, expressed K02357: tsf, elongation factor Ts
3 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
4 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
6 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
7 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
8 Sobic.007G052400 rubredoxin family protein, putative, expressed -
9 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
10 Sobic.007G225500 expressed protein -
11 Sobic.004G012900 expressed protein -
12 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
13 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
14 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
15 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
16 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
17 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
18 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
19 Sobic.010G035400 expressed protein -
20 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic010G201600 Sobic010G201600 Sobic005G100300 Sobic005G100300 Sobic010G201600--Sobic005G100300 Sobic002G405100 Sobic002G405100 Sobic010G201600--Sobic002G405100 Sobic001G128600 Sobic001G128600 Sobic010G201600--Sobic001G128600 Sobic002G133900 Sobic002G133900 Sobic010G201600--Sobic002G133900 Sobic002G233700 Sobic002G233700 Sobic010G201600--Sobic002G233700 Sobic002G401800 Sobic002G401800 Sobic010G201600--Sobic002G401800 Sobic004G303200 Sobic004G303200 Sobic010G201600--Sobic004G303200 Sobic007G052400 Sobic007G052400 Sobic010G201600--Sobic007G052400 Sobic003G094350 Sobic003G094350 Sobic010G201600--Sobic003G094350 Sobic005G100300--Sobic002G405100 Sobic005G100300--Sobic002G133900 Sobic005G100300--Sobic010G201600 Sobic005G100300--Sobic003G094350 Sobic003G160800 Sobic003G160800 Sobic005G100300--Sobic003G160800 Sobic005G100300--Sobic001G128600 Sobic005G100300--Sobic002G401800 Sobic001G134700 Sobic001G134700 Sobic005G100300--Sobic001G134700 Sobic004G353100 Sobic004G353100 Sobic005G100300--Sobic004G353100 Sobic002G405100--Sobic002G133900 Sobic002G405100--Sobic005G100300 Sobic002G405100--Sobic002G401800 Sobic002G405100--Sobic004G353100 Sobic010G035400 Sobic010G035400 Sobic002G405100--Sobic010G035400 Sobic002G405100--Sobic010G201600 Sobic002G405100--Sobic003G094350 Sobic004G336200 Sobic004G336200 Sobic002G405100--Sobic004G336200 Sobic002G405100--Sobic007G052400 Sobic002G112400 Sobic002G112400 Sobic001G128600--Sobic002G112400 Sobic006G265900 Sobic006G265900 Sobic001G128600--Sobic006G265900 Sobic008G006100 Sobic008G006100 Sobic001G128600--Sobic008G006100 Sobic001G122300 Sobic001G122300 Sobic001G128600--Sobic001G122300 Sobic001G005200 Sobic001G005200 Sobic001G128600--Sobic001G005200 Sobic001G128600--Sobic005G100300 Sobic002G298800 Sobic002G298800 Sobic001G128600--Sobic002G298800 Sobic009G175500 Sobic009G175500 Sobic001G128600--Sobic009G175500 Sobic006G097500 Sobic006G097500 Sobic001G128600--Sobic006G097500 Sobic003G070900 Sobic003G070900 Sobic002G133900--Sobic003G070900 Sobic002G133900--Sobic003G094350 Sobic003G287900 Sobic003G287900 Sobic002G133900--Sobic003G287900 Sobic002G133900--Sobic002G405100 Sobic002G133900--Sobic004G353100 Sobic002G133900--Sobic005G100300 Sobic002G028400 Sobic002G028400 Sobic002G133900--Sobic002G028400 Sobic007G103400 Sobic007G103400 Sobic002G133900--Sobic007G103400 Sobic009G170200 Sobic009G170200 Sobic002G133900--Sobic009G170200 Sobic008G171300 Sobic008G171300 Sobic002G233700--Sobic008G171300 Sobic004G012900 Sobic004G012900 Sobic002G233700--Sobic004G012900 Sobic002G233700--Sobic004G303200 Sobic002G233700--Sobic007G052400 Sobic007G225500 Sobic007G225500 Sobic002G233700--Sobic007G225500 Sobic002G233700--Sobic001G005200 Sobic003G002300 Sobic003G002300 Sobic002G233700--Sobic003G002300 Sobic002G233700--Sobic002G401800 Sobic003G378600 Sobic003G378600 Sobic002G233700--Sobic003G378600 Sobic002G401800--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic002G401800--Sobic008G073100 Sobic002G401800--Sobic002G405100 Sobic002G401800--Sobic004G012900 Sobic002G272100 Sobic002G272100 Sobic002G401800--Sobic002G272100 Sobic005G110400 Sobic005G110400 Sobic002G401800--Sobic005G110400 Sobic002G401800--Sobic005G100300 Sobic001G368500 Sobic001G368500 Sobic002G401800--Sobic001G368500 Sobic003G077400 Sobic003G077400 Sobic002G401800--Sobic003G077400 Sobic004G303200--Sobic002G233700 Sobic004G303200--Sobic007G225500 Sobic006G102000 Sobic006G102000 Sobic004G303200--Sobic006G102000 Sobic010G160700 Sobic010G160700 Sobic004G303200--Sobic010G160700 Sobic004G303200--Sobic010G035400 Sobic004G303200--Sobic007G052400 Sobic009G059300 Sobic009G059300 Sobic004G303200--Sobic009G059300 Sobic004G303200--Sobic001G005200 Sobic006G207800 Sobic006G207800 Sobic004G303200--Sobic006G207800 Sobic010G005500 Sobic010G005500 Sobic007G052400--Sobic010G005500 Sobic007G052400--Sobic003G002300 Sobic007G052400--Sobic004G012900 Sobic007G052400--Sobic008G171300 Sobic007G052400--Sobic007G225500 Sobic009G183700 Sobic009G183700 Sobic007G052400--Sobic009G183700 Sobic009G030900 Sobic009G030900 Sobic007G052400--Sobic009G030900 Sobic008G102000 Sobic008G102000 Sobic007G052400--Sobic008G102000 Sobic007G052400--Sobic002G233700 Sobic003G094350--Sobic002G133900 Sobic003G094350--Sobic003G070900 Sobic001G500600 Sobic001G500600 Sobic003G094350--Sobic001G500600 Sobic003G094350--Sobic003G287900 Sobic003G094350--Sobic005G100300 Sobic003G094350--Sobic002G028400 Sobic003G094350--Sobic004G336200 Sobic010G002000 Sobic010G002000 Sobic003G094350--Sobic010G002000 Sobic003G094350--Sobic004G353100
Octagon: transcription factors


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