Gene annotation
Transcriptome id Sobic.001G124800.2
Synonym Sb01g010980
Functional annotation expressed protein
UniProt A0A1Z5S5X4
Pfam -
Panther DB PTHR36046
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02725 : -
RAP-DB (Rice) LOC_Os03g49450.1 : expressed protein
MaizeGDB (Corn) Zm00025a007742
Brachypodium KQK13653
Barley HORVU4Hr1G006090.2 , HORVU4Hr1G006090.1
Wheat TraesCS4B02G038700 , TraesCS4A02G275200 , TraesCS4A02G275200 , TraesCS4D02G035600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
2 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.006G101500 expressed protein -
4 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
5 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.001G309300 expressed protein -
7 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
8 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
9 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
11 Sobic.008G006100 MATE efflux protein, putative, expressed -
12 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
13 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
14 Sobic.001G512500 expressed protein -
15 Sobic.001G183000 peptidase M50 family protein, putative, expressed -
16 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
17 Sobic.006G010900 expressed protein -
18 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
19 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
20 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase


Gene co-expression network
sample Sobic001G124800 Sobic001G124800 Sobic003G387100 Sobic003G387100 Sobic001G124800--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic001G124800--Sobic002G102200 Sobic006G101500 Sobic006G101500 Sobic001G124800--Sobic006G101500 Sobic004G054400 Sobic004G054400 Sobic001G124800--Sobic004G054400 Sobic003G160800 Sobic003G160800 Sobic001G124800--Sobic003G160800 Sobic001G309300 Sobic001G309300 Sobic001G124800--Sobic001G309300 Sobic002G112400 Sobic002G112400 Sobic001G124800--Sobic002G112400 Sobic010G058200 Sobic010G058200 Sobic001G124800--Sobic010G058200 Sobic004G336200 Sobic004G336200 Sobic001G124800--Sobic004G336200 Sobic009G059300 Sobic009G059300 Sobic003G387100--Sobic009G059300 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic002G102200--Sobic006G101500 Sobic001G391900 Sobic001G391900 Sobic002G102200--Sobic001G391900 Sobic002G102200--Sobic003G387100 Sobic002G102200--Sobic001G124800 Sobic002G102200--Sobic010G058200 Sobic006G050400 Sobic006G050400 Sobic002G102200--Sobic006G050400 Sobic008G006100 Sobic008G006100 Sobic002G102200--Sobic008G006100 Sobic008G063200 Sobic008G063200 Sobic002G102200--Sobic008G063200 Sobic002G102200--Sobic009G059300 Sobic006G101500--Sobic003G387100 Sobic006G101500--Sobic002G102200 Sobic001G183000 Sobic001G183000 Sobic006G101500--Sobic001G183000 Sobic004G211600 Sobic004G211600 Sobic006G101500--Sobic004G211600 Sobic001G134700 Sobic001G134700 Sobic006G101500--Sobic001G134700 Sobic003G431700 Sobic003G431700 Sobic006G101500--Sobic003G431700 Sobic006G101500--Sobic003G412900 Sobic006G093900 Sobic006G093900 Sobic006G101500--Sobic006G093900 Sobic006G101500--Sobic008G006100 Sobic004G054400--Sobic001G124800 Sobic004G054400--Sobic001G309300 Sobic004G054400--Sobic003G387100 Sobic001G032700 Sobic001G032700 Sobic004G054400--Sobic001G032700 Sobic008G001900 Sobic008G001900 Sobic004G054400--Sobic008G001900 Sobic001G516901 Sobic001G516901 Sobic004G054400--Sobic001G516901 Sobic001G512500 Sobic001G512500 Sobic004G054400--Sobic001G512500 Sobic004G336000 Sobic004G336000 Sobic004G054400--Sobic004G336000 Sobic006G010900 Sobic006G010900 Sobic004G054400--Sobic006G010900 Sobic003G160800--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic003G160800--Sobic005G100300 Sobic003G160800--Sobic010G035400 Sobic003G160800--Sobic003G387100 Sobic007G103400 Sobic007G103400 Sobic003G160800--Sobic007G103400 Sobic003G160800--Sobic002G112400 Sobic003G233700 Sobic003G233700 Sobic003G160800--Sobic003G233700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500 Sobic001G309300--Sobic008G073100 Sobic001G309300--Sobic004G336000 Sobic001G309300--Sobic009G059300 Sobic001G309300--Sobic003G387100 Sobic001G309300--Sobic005G110400 Sobic004G331700 Sobic004G331700 Sobic001G309300--Sobic004G331700 Sobic001G291900 Sobic001G291900 Sobic001G309300--Sobic001G291900 Sobic001G309300--Sobic004G012900 Sobic001G308200 Sobic001G308200 Sobic001G309300--Sobic001G308200 Sobic001G128600 Sobic001G128600 Sobic002G112400--Sobic001G128600 Sobic002G112400--Sobic008G006100 Sobic002G112400--Sobic003G160800 Sobic009G062400 Sobic009G062400 Sobic002G112400--Sobic009G062400 Sobic006G265900 Sobic006G265900 Sobic002G112400--Sobic006G265900 Sobic001G122300 Sobic001G122300 Sobic002G112400--Sobic001G122300 Sobic009G056700 Sobic009G056700 Sobic002G112400--Sobic009G056700 Sobic009G237000 Sobic009G237000 Sobic002G112400--Sobic009G237000 Sobic002G112400--Sobic003G387100 Sobic001G286600 Sobic001G286600 Sobic010G058200--Sobic001G286600 Sobic006G188000 Sobic006G188000 Sobic010G058200--Sobic006G188000 Sobic004G154400 Sobic004G154400 Sobic010G058200--Sobic004G154400 Sobic010G058200--Sobic002G102200 Sobic010G058200--Sobic009G062400 Sobic010G269400 Sobic010G269400 Sobic010G058200--Sobic010G269400 Sobic010G140600 Sobic010G140600 Sobic010G058200--Sobic010G140600 Sobic006G102000 Sobic006G102000 Sobic010G058200--Sobic006G102000 Sobic002G136100 Sobic002G136100 Sobic010G058200--Sobic002G136100 Sobic002G401800 Sobic002G401800 Sobic004G336200--Sobic002G401800 Sobic004G336200--Sobic010G035400 Sobic001G500600 Sobic001G500600 Sobic004G336200--Sobic001G500600 Sobic004G336200--Sobic003G387100 Sobic004G336200--Sobic003G160800 Sobic004G336200--Sobic008G073100 Sobic004G336200--Sobic001G134700 Sobic004G336200--Sobic005G110400 Sobic006G197300 Sobic006G197300 Sobic004G336200--Sobic006G197300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.