Gene annotation
Transcriptome id Sobic.003G254600.1
Synonym Sb03g030980
Functional annotation expressed protein
UniProt C5XG47
Pfam -
Panther DB PTHR35719 PTHR35719:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33250 : -
RAP-DB (Rice) LOC_Os01g48820.1 : expressed protein
MaizeGDB (Corn) Zm00025a028069 , Zm00025a038817
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G254600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
2 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
3 Sobic.006G107600 plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed K19032: 30S ribosomal protein 3
4 Sobic.003G421400 expressed protein -
5 Sobic.009G055800 expressed protein -
6 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
7 Sobic.001G447700 expressed protein -
8 Sobic.001G469900 esterase/lipase/thioesterase, putative, expressed -
9 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
10 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
11 Sobic.003G439000 rubredoxin family protein, putative, expressed -
12 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
13 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
14 Sobic.001G175700 expressed protein -
15 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
16 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
17 Sobic.004G179200 expressed protein -
18 Sobic.004G119500 peptidase, putative, expressed K03100: signal peptidase I
19 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
20 Sobic.001G186200 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic003G254600 Sobic003G254600 Sobic001G196200 Sobic001G196200 Sobic003G254600--Sobic001G196200 Sobic001G035800 Sobic001G035800 Sobic003G254600--Sobic001G035800 Sobic006G107600 Sobic006G107600 Sobic003G254600--Sobic006G107600 Sobic003G421400 Sobic003G421400 Sobic003G254600--Sobic003G421400 Sobic009G055800 Sobic009G055800 Sobic003G254600--Sobic009G055800 Sobic001G489800 Sobic001G489800 Sobic003G254600--Sobic001G489800 Sobic001G447700 Sobic001G447700 Sobic003G254600--Sobic001G447700 Sobic001G469900 Sobic001G469900 Sobic003G254600--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic003G254600--Sobic007G085800 Sobic002G056800 Sobic002G056800 Sobic001G196200--Sobic002G056800 Sobic002G131700 Sobic002G131700 Sobic001G196200--Sobic002G131700 Sobic001G196200--Sobic003G254600 Sobic003G310100 Sobic003G310100 Sobic001G196200--Sobic003G310100 Sobic006G111600 Sobic006G111600 Sobic001G196200--Sobic006G111600 Sobic005G002900 Sobic005G002900 Sobic001G196200--Sobic005G002900 Sobic009G028400 Sobic009G028400 Sobic001G196200--Sobic009G028400 Sobic004G179200 Sobic004G179200 Sobic001G196200--Sobic004G179200 Sobic002G424100 Sobic002G424100 Sobic001G196200--Sobic002G424100 Sobic001G035800--Sobic009G055800 Sobic001G417200 Sobic001G417200 Sobic001G035800--Sobic001G417200 Sobic004G227200 Sobic004G227200 Sobic001G035800--Sobic004G227200 Sobic001G405700 Sobic001G405700 Sobic001G035800--Sobic001G405700 Sobic006G093900 Sobic006G093900 Sobic001G035800--Sobic006G093900 Sobic001G035800--Sobic003G254600 Sobic003G412900 Sobic003G412900 Sobic001G035800--Sobic003G412900 Sobic003G439000 Sobic003G439000 Sobic001G035800--Sobic003G439000 Sobic001G168800 Sobic001G168800 Sobic001G035800--Sobic001G168800 Sobic003G256200 Sobic003G256200 Sobic006G107600--Sobic003G256200 Sobic001G240000 Sobic001G240000 Sobic006G107600--Sobic001G240000 Sobic007G171800 Sobic007G171800 Sobic006G107600--Sobic007G171800 Sobic001G040000 Sobic001G040000 Sobic006G107600--Sobic001G040000 Sobic001G391400 Sobic001G391400 Sobic006G107600--Sobic001G391400 Sobic002G305700 Sobic002G305700 Sobic006G107600--Sobic002G305700 Sobic001G122400 Sobic001G122400 Sobic006G107600--Sobic001G122400 Sobic001G191000 Sobic001G191000 Sobic006G107600--Sobic001G191000 Sobic001G453300 Sobic001G453300 Sobic006G107600--Sobic001G453300 Sobic003G421400--Sobic003G254600 Sobic008G063200 Sobic008G063200 Sobic003G421400--Sobic008G063200 Sobic004G343100 Sobic004G343100 Sobic003G421400--Sobic004G343100 Sobic009G034600 Sobic009G034600 Sobic003G421400--Sobic009G034600 Sobic008G063100 Sobic008G063100 Sobic003G421400--Sobic008G063100 Sobic010G186400 Sobic010G186400 Sobic003G421400--Sobic010G186400 Sobic005G021600 Sobic005G021600 Sobic003G421400--Sobic005G021600 Sobic006G110900 Sobic006G110900 Sobic003G421400--Sobic006G110900 Sobic001G286600 Sobic001G286600 Sobic003G421400--Sobic001G286600 Sobic009G055800--Sobic001G469900 Sobic009G055800--Sobic001G035800 Sobic003G077400 Sobic003G077400 Sobic009G055800--Sobic003G077400 Sobic009G164300 Sobic009G164300 Sobic009G055800--Sobic009G164300 Sobic009G055800--Sobic003G439000 Sobic009G055800--Sobic003G254600 Sobic008G062500 Sobic008G062500 Sobic009G055800--Sobic008G062500 Sobic009G055800--Sobic001G168800 Sobic001G469933 Sobic001G469933 Sobic009G055800--Sobic001G469933 Sobic001G424300 Sobic001G424300 Sobic001G489800--Sobic001G424300 Sobic001G489800--Sobic003G310100 Sobic001G489800--Sobic003G254600 Sobic001G281500 Sobic001G281500 Sobic001G489800--Sobic001G281500 Sobic006G273400 Sobic006G273400 Sobic001G489800--Sobic006G273400 Sobic002G081500 Sobic002G081500 Sobic001G489800--Sobic002G081500 Sobic001G489800--Sobic001G196200 Sobic002G297400 Sobic002G297400 Sobic001G489800--Sobic002G297400 Sobic003G128400 Sobic003G128400 Sobic001G489800--Sobic003G128400 Sobic001G291900 Sobic001G291900 Sobic001G447700--Sobic001G291900 Sobic003G085000 Sobic003G085000 Sobic001G447700--Sobic003G085000 Sobic006G256600 Sobic006G256600 Sobic001G447700--Sobic006G256600 Sobic001G447700--Sobic001G035800 Sobic001G104800 Sobic001G104800 Sobic001G447700--Sobic001G104800 Sobic002G198600 Sobic002G198600 Sobic001G447700--Sobic002G198600 Sobic001G295300 Sobic001G295300 Sobic001G447700--Sobic001G295300 Sobic001G308800 Sobic001G308800 Sobic001G447700--Sobic001G308800 Sobic001G447700--Sobic006G107600 Sobic001G469900--Sobic003G439000 Sobic001G469900--Sobic009G055800 Sobic001G469900--Sobic001G469933 Sobic001G469900--Sobic001G168800 Sobic001G469900--Sobic004G179200 Sobic001G183000 Sobic001G183000 Sobic001G469900--Sobic001G183000 Sobic001G134700 Sobic001G134700 Sobic001G469900--Sobic001G134700 Sobic003G151500 Sobic003G151500 Sobic001G469900--Sobic003G151500 Sobic001G469900--Sobic003G077400 Sobic006G210400 Sobic006G210400 Sobic007G085800--Sobic006G210400 Sobic006G010900 Sobic006G010900 Sobic007G085800--Sobic006G010900 Sobic007G085800--Sobic003G412900 Sobic008G116300 Sobic008G116300 Sobic007G085800--Sobic008G116300 Sobic001G069000 Sobic001G069000 Sobic007G085800--Sobic001G069000 Sobic003G387100 Sobic003G387100 Sobic007G085800--Sobic003G387100 Sobic010G214100 Sobic010G214100 Sobic007G085800--Sobic010G214100 Sobic007G085800--Sobic001G168800 Sobic001G186200 Sobic001G186200 Sobic007G085800--Sobic001G186200
Octagon: transcription factors


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