Gene annotation
Transcriptome id Sobic.001G083100.1
Synonym Sb01g007490
Functional annotation Unnamed (PubMedID : 24676859)
WRKY4, expressed
UniProt A0A1B6QHV5 , C6JSI3
Pfam PF12204
Panther DB PTHR33404 PTHR33404:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29185 : Domain of unknown function (DUF3598)
RAP-DB (Rice) LOC_Os03g55164.1 : WRKY4, expressed
MaizeGDB (Corn) Zm00025a016765
Brachypodium KQK13090
Barley HORVU5Hr1G096800.15 , HORVU5Hr1G096800.8 , HORVU5Hr1G096800.9 , HORVU5Hr1G096800.7 , HORVU5Hr1G096800.14 , HORVU5Hr1G096800.12 , HORVU5Hr1G096800.13 , HORVU5Hr1G096800.10 , HORVU5Hr1G096800.11
Wheat TraesCS5A02G396700 , TraesCS5A02G396700 , TraesCS5B02G401700 , TraesCS5D02G406400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
2 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
3 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
4 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
5 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
6 Sobic.002G272100 expressed protein -
7 Sobic.003G372900 deoxynucleoside kinase family, putative, expressed -
8 Sobic.001G054100 spo0B-associated GTP-binding protein, putative, expressed -
9 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
10 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
11 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
12 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
13 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
14 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
15 Sobic.002G406700 tyrosine-specific transport protein, putative, expressed K03834: tyrosine-specific transport protein
16 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
17 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
18 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
19 Sobic.002G181000 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
20 Sobic.003G324700 expressed protein -


Gene co-expression network
sample Sobic001G083100 Sobic001G083100 Sobic005G002900 Sobic005G002900 Sobic001G083100--Sobic005G002900 Sobic009G148500 Sobic009G148500 Sobic001G083100--Sobic009G148500 Sobic008G039600 Sobic008G039600 Sobic001G083100--Sobic008G039600 Sobic001G469933 Sobic001G469933 Sobic001G083100--Sobic001G469933 Sobic006G055800 Sobic006G055800 Sobic001G083100--Sobic006G055800 Sobic002G272100 Sobic002G272100 Sobic001G083100--Sobic002G272100 Sobic003G372900 Sobic003G372900 Sobic001G083100--Sobic003G372900 Sobic001G054100 Sobic001G054100 Sobic001G083100--Sobic001G054100 Sobic008G073100 Sobic008G073100 Sobic001G083100--Sobic008G073100 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic005G002900--Sobic009G148500 Sobic005G002900--Sobic001G469933 Sobic001G291900 Sobic001G291900 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic003G432500 Sobic003G432500 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic002G131700 Sobic002G131700 Sobic005G002900--Sobic002G131700 Sobic009G148500--Sobic001G083100 Sobic003G151500 Sobic003G151500 Sobic009G148500--Sobic003G151500 Sobic009G148500--Sobic008G073100 Sobic009G148500--Sobic006G055800 Sobic001G126300 Sobic001G126300 Sobic009G148500--Sobic001G126300 Sobic004G011300 Sobic004G011300 Sobic009G148500--Sobic004G011300 Sobic009G148500--Sobic005G002900 Sobic005G110400 Sobic005G110400 Sobic009G148500--Sobic005G110400 Sobic001G500600 Sobic001G500600 Sobic009G148500--Sobic001G500600 Sobic005G143500 Sobic005G143500 Sobic008G039600--Sobic005G143500 Sobic008G039600--Sobic001G083100 Sobic008G039600--Sobic006G106400 Sobic002G401800 Sobic002G401800 Sobic008G039600--Sobic002G401800 Sobic008G039600--Sobic002G272100 Sobic010G002000 Sobic010G002000 Sobic008G039600--Sobic010G002000 Sobic001G368500 Sobic001G368500 Sobic008G039600--Sobic001G368500 Sobic003G094350 Sobic003G094350 Sobic008G039600--Sobic003G094350 Sobic002G181000 Sobic002G181000 Sobic008G039600--Sobic002G181000 Sobic001G122400 Sobic001G122400 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic003G324700 Sobic003G324700 Sobic001G469933--Sobic003G324700 Sobic003G077400 Sobic003G077400 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic006G055800--Sobic001G083100 Sobic006G055800--Sobic005G110400 Sobic002G272100--Sobic002G401800 Sobic002G272100--Sobic008G073100 Sobic002G272100--Sobic001G368500 Sobic008G050400 Sobic008G050400 Sobic002G272100--Sobic008G050400 Sobic002G272100--Sobic008G039600 Sobic002G351600 Sobic002G351600 Sobic002G272100--Sobic002G351600 Sobic002G267900 Sobic002G267900 Sobic002G272100--Sobic002G267900 Sobic002G272100--Sobic001G083100 Sobic002G272100--Sobic005G110400 Sobic003G372900--Sobic001G500600 Sobic003G372900--Sobic001G054100 Sobic003G372900--Sobic001G083100 Sobic002G406700 Sobic002G406700 Sobic003G372900--Sobic002G406700 Sobic003G141100 Sobic003G141100 Sobic003G372900--Sobic003G141100 Sobic003G372900--Sobic003G094350 Sobic004G336200 Sobic004G336200 Sobic003G372900--Sobic004G336200 Sobic004G333400 Sobic004G333400 Sobic003G372900--Sobic004G333400 Sobic006G280800 Sobic006G280800 Sobic003G372900--Sobic006G280800 Sobic001G028100 Sobic001G028100 Sobic001G054100--Sobic001G028100 Sobic001G054100--Sobic003G372900 Sobic001G054100--Sobic001G083100 Sobic001G054100--Sobic002G181000 Sobic001G054100--Sobic003G141100 Sobic001G054100--Sobic010G002000 Sobic007G185700 Sobic007G185700 Sobic001G054100--Sobic007G185700 Sobic001G037500 Sobic001G037500 Sobic001G054100--Sobic001G037500 Sobic004G328400 Sobic004G328400 Sobic001G054100--Sobic004G328400 Sobic008G073100--Sobic005G110400 Sobic008G073100--Sobic001G368500 Sobic008G073100--Sobic002G401800 Sobic003G387100 Sobic003G387100 Sobic008G073100--Sobic003G387100 Sobic008G073100--Sobic004G336200 Sobic001G309300 Sobic001G309300 Sobic008G073100--Sobic001G309300 Sobic008G073100--Sobic003G077400 Sobic008G073100--Sobic002G272100 Sobic008G073100--Sobic006G106400
Octagon: transcription factors


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