Gene annotation
| Transcriptome id | Sobic.006G155700.1 |
|---|---|
| Synonym | SbWBC11, ABCG11, Sb06g023280, WBC11, White-brown complex 11, DSO, COF1, ATWBC11 |
| Functional annotation | ABC transporter (PubMedID : 23463491) white-brown complex homolog protein 11, putative, expressed |
| UniProt | A0A1Z5REI5 |
| Pfam | PF00005 PF01061 |
| Panther DB | PTHR19241 PTHR19241:SF271 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane |
Orthologs (automatic annotation)
| TAIR | AT1G17840 : white-brown complex homolog protein 11 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g44610.1 : white-brown complex homolog protein 11, putative, expressed |
| MaizeGDB (Corn) | Zm00025a006484 , Zm00025a010478 , Zm00025a017538 |
| Brachypodium | KQJ97270 , KQJ83708 , KQJ83709 |
| Barley | HORVU1Hr1G030200.2 , HORVU1Hr1G030200.3 , HORVU1Hr1G030200.1 , HORVU1Hr1G030200.4 , HORVU2Hr1G090960.8 , HORVU2Hr1G090960.9 , HORVU2Hr1G090960.3 , HORVU2Hr1G090960.6 , HORVU2Hr1G090960.2 , HORVU2Hr1G090960.1 , HORVU2Hr1G090960.7 , HORVU2Hr1G090960.4 , HORVU2Hr1G090960.5 |
| Wheat | TraesCS2A02G374100 , TraesCS2D02G370400 , TraesCS2D02G370400 , TraesCS5D02G257400 , TraesCSU02G020100 , TraesCS1A02G164500 , TraesCS1B02G181300 , TraesCS1B02G181300 , TraesCS1A02G126900 , TraesCS1D02G150800 , TraesCS5D02G257000 , TraesCS5B02G247700 , TraesCS1D02G126600 , TraesCS1D02G161500 , TraesCS5D02G257100 , TraesCS5D02G257100 , TraesCS2A02G374100 , TraesCS1D02G161500 |
| Populus | - |
JBrowse
| Sobic.006G155700 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G069200 | transferase family protein, putative, expressed | K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase |
| 2 | Sobic.001G221300 | alcohol oxidase, putative, expressed | K17756: long-chain-alcohol oxidase |
| 3 | Sobic.009G083300 | white-brown complex homolog protein 12, putative, expressed | - |
| 4 | Sobic.002G198600 | -(PubMedID : 29017446)@expressed protein | - |
| 5 | Sobic.003G162900 | expressed protein | - |
| 6 | Sobic.003G150600 | pectinacetylesterase domain containing protein, expressed | - |
| 7 | Sobic.004G040600 | pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed | - |
| 8 | Sobic.006G054300 | amidohydrolase family protein, expressed | - |
| 9 | Sobic.003G433900 | expressed protein | - |
| 10 | Sobic.003G132100 | magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed | K04035: E1.14.13.81, acsF, magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase |
| 11 | Sobic.001G495300 | expressed protein | - |
| 12 | Sobic.006G248200 | - | - |
| 13 | Sobic.001G041800 | -(PubMedID : 29017446)@magnesium-chelatase subunit chlD, chloroplast precursor, putative, expressed | K03404: chlD, magnesium chelatase subunit D |
| 14 | Sobic.003G386300 | expressed protein | - |
| 15 | Sobic.003G197400 | Protein lycopene epsilon cyclase (Os)(PubMedID : 27208977)@-(PubMedID : 29017446)@lycopene epsilon cyclase, chloroplast precursor, putative, expressed | K06444: lcyE, lycopene epsilon-cyclase |
| 16 | Sobic.001G195800 | aquaporin protein, putative, expressed | K09874: aquaporin NIP |
| 17 | Sobic.001G415400 | PsbP, putative, expressed | - |
| 18 | Sobic.010G011800 | OsFBO18 - F-box and other domain containing protein, expressed | - |
| 19 | Sobic.001G475600 | prenyltransferase, putative, expressed | K02548: 1,4-dihydroxy-2-naphthoate polyprenyltransferase |
| 20 | Sobic.003G265500 | peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed | K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family |
Gene co-expression network
Octagon: transcription factors
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