Gene annotation
Transcriptome id Sobic.003G069200.2
Synonym HCT, Sb03g005870
Functional annotation transferase family protein, putative, expressed
UniProt A0A1B6Q1R0
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF16
NCBI CDD -
KEGG Orthology K13065; E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os08g43040.2 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023429 , Zm00025a023433 , Zm00025a023432 , Zm00025a023571 , Zm00025a023574 , Zm00025a023575
Brachypodium -
Barley -
Wheat TraesCS7D02G436700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G221300 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
2 Sobic.003G120500 transmembrane protein 136, putative, expressed -
3 Sobic.004G036100 SAM dependent carboxyl methyltransferase, putative, expressed -
4 Sobic.006G155700 ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed -
5 Sobic.006G248200 - -
6 Sobic.003G150600 pectinacetylesterase domain containing protein, expressed -
7 Sobic.003G386300 expressed protein -
8 Sobic.003G157400 TPR repeat, putative, expressed -
9 Sobic.001G475600 prenyltransferase, putative, expressed K02548: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
10 Sobic.010G255600 thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed -
11 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
12 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
13 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
14 Sobic.004G054500 porphobilinogen deaminase, chloroplast precursor, putative, expressed K01749: hemC, hydroxymethylbilane synthase
15 Sobic.009G238300 expressed protein -
16 Sobic.007G143700 immunophilin(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
17 Sobic.003G433900 expressed protein -
18 Sobic.001G464700 - -
19 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.004G311100 -(PubMedID : 29017446)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase


Gene co-expression network
sample Sobic003G069200 Sobic003G069200 Sobic001G221300 Sobic001G221300 Sobic003G069200--Sobic001G221300 Sobic003G120500 Sobic003G120500 Sobic003G069200--Sobic003G120500 Sobic004G036100 Sobic004G036100 Sobic003G069200--Sobic004G036100 Sobic006G155700 Sobic006G155700 Sobic003G069200--Sobic006G155700 Sobic006G248200 Sobic006G248200 Sobic003G069200--Sobic006G248200 Sobic003G150600 Sobic003G150600 Sobic003G069200--Sobic003G150600 Sobic003G386300 Sobic003G386300 Sobic003G069200--Sobic003G386300 Sobic003G157400 Sobic003G157400 Sobic003G069200--Sobic003G157400 Sobic001G475600 Sobic001G475600 Sobic003G069200--Sobic001G475600 Sobic001G221300--Sobic003G069200 Sobic001G221300--Sobic003G150600 Sobic003G433900 Sobic003G433900 Sobic001G221300--Sobic003G433900 Sobic002G198600 Sobic002G198600 Sobic001G221300--Sobic002G198600 Sobic002G227700 Sobic002G227700 Sobic001G221300--Sobic002G227700 Sobic001G221300--Sobic003G386300 Sobic001G221300--Sobic006G248200 Sobic006G013800 Sobic006G013800 Sobic001G221300--Sobic006G013800 Sobic004G311100 Sobic004G311100 Sobic001G221300--Sobic004G311100 Sobic003G120500--Sobic004G036100 Sobic001G453200 Sobic001G453200 Sobic003G120500--Sobic001G453200 Sobic003G120500--Sobic003G069200 Sobic004G249400 Sobic004G249400 Sobic003G120500--Sobic004G249400 Sobic004G044200 Sobic004G044200 Sobic003G120500--Sobic004G044200 Sobic002G207900 Sobic002G207900 Sobic003G120500--Sobic002G207900 Sobic002G209800 Sobic002G209800 Sobic003G120500--Sobic002G209800 Sobic005G218201 Sobic005G218201 Sobic003G120500--Sobic005G218201 Sobic010G255600 Sobic010G255600 Sobic003G120500--Sobic010G255600 Sobic004G036100--Sobic010G255600 Sobic004G036100--Sobic003G120500 Sobic004G036100--Sobic003G157400 Sobic001G464700 Sobic001G464700 Sobic004G036100--Sobic001G464700 Sobic004G036100--Sobic003G069200 Sobic007G185100 Sobic007G185100 Sobic004G036100--Sobic007G185100 Sobic004G054500 Sobic004G054500 Sobic004G036100--Sobic004G054500 Sobic004G036100--Sobic004G044200 Sobic006G145500 Sobic006G145500 Sobic004G036100--Sobic006G145500 Sobic006G155700--Sobic003G069200 Sobic006G155700--Sobic001G221300 Sobic009G083300 Sobic009G083300 Sobic006G155700--Sobic009G083300 Sobic006G155700--Sobic002G198600 Sobic003G162900 Sobic003G162900 Sobic006G155700--Sobic003G162900 Sobic006G155700--Sobic003G150600 Sobic004G040600 Sobic004G040600 Sobic006G155700--Sobic004G040600 Sobic006G054300 Sobic006G054300 Sobic006G155700--Sobic006G054300 Sobic006G155700--Sobic003G433900 Sobic006G248200--Sobic003G386300 Sobic001G240000 Sobic001G240000 Sobic006G248200--Sobic001G240000 Sobic001G531200 Sobic001G531200 Sobic006G248200--Sobic001G531200 Sobic006G248200--Sobic002G198600 Sobic003G030900 Sobic003G030900 Sobic006G248200--Sobic003G030900 Sobic006G248200--Sobic001G475600 Sobic006G248200--Sobic004G054500 Sobic002G305700 Sobic002G305700 Sobic006G248200--Sobic002G305700 Sobic006G248200--Sobic004G311100 Sobic003G150600--Sobic001G221300 Sobic010G011800 Sobic010G011800 Sobic003G150600--Sobic010G011800 Sobic009G091800 Sobic009G091800 Sobic003G150600--Sobic009G091800 Sobic008G051000 Sobic008G051000 Sobic003G150600--Sobic008G051000 Sobic004G238500 Sobic004G238500 Sobic003G150600--Sobic004G238500 Sobic010G022100 Sobic010G022100 Sobic003G150600--Sobic010G022100 Sobic003G150600--Sobic003G433900 Sobic003G150600--Sobic003G069200 Sobic002G288300 Sobic002G288300 Sobic003G150600--Sobic002G288300 Sobic001G122400 Sobic001G122400 Sobic003G386300--Sobic001G122400 Sobic004G335800 Sobic004G335800 Sobic003G386300--Sobic004G335800 Sobic001G527100 Sobic001G527100 Sobic003G386300--Sobic001G527100 Sobic002G198000 Sobic002G198000 Sobic003G386300--Sobic002G198000 Sobic003G386300--Sobic001G240000 Sobic010G095200 Sobic010G095200 Sobic003G386300--Sobic010G095200 Sobic001G040000 Sobic001G040000 Sobic003G386300--Sobic001G040000 Sobic004G164100 Sobic004G164100 Sobic003G386300--Sobic004G164100 Sobic003G386300--Sobic001G475600 Sobic003G157400--Sobic003G386300 Sobic003G157400--Sobic004G054500 Sobic003G157400--Sobic004G036100 Sobic007G143700 Sobic007G143700 Sobic003G157400--Sobic007G143700 Sobic003G157400--Sobic010G255600 Sobic003G157400--Sobic001G475600 Sobic003G157400--Sobic001G122400 Sobic003G157400--Sobic004G335800 Sobic003G157400--Sobic010G095200 Sobic001G475600--Sobic003G386300 Sobic007G013400 Sobic007G013400 Sobic001G475600--Sobic007G013400 Sobic001G475600--Sobic001G040000 Sobic002G251400 Sobic002G251400 Sobic001G475600--Sobic002G251400 Sobic001G475600--Sobic004G335800 Sobic001G475600--Sobic010G095200 Sobic003G295800 Sobic003G295800 Sobic001G475600--Sobic003G295800 Sobic001G475600--Sobic001G122400 Sobic001G475600--Sobic007G143700
Octagon: transcription factors


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