Gene annotation
Transcriptome id Sobic.009G238300.1,Sobic.009G238300.2
Synonym Sb09g029060
Functional annotation expressed protein
UniProt A0A1B6PAC2 , C5YW00
Pfam PF12159
Panther DB PTHR35473 PTHR35473:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64355 : -
RAP-DB (Rice) LOC_Os05g49650.1,LOC_Os05g49650.2 : expressed protein
MaizeGDB (Corn) Zm00025a055978 , Zm00025a044641 , Zm00025a027142
Brachypodium KQK04776
Barley -
Wheat TraesCS1D02G418700 , TraesCS1A02G410800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G386300 expressed protein -
2 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
3 Sobic.003G157400 TPR repeat, putative, expressed -
4 Sobic.003G324700 expressed protein -
5 Sobic.002G341500 rotamase(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed -
6 Sobic.004G335800 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
7 Sobic.001G527100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
8 Sobic.001G240000 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
9 Sobic.002G353300 Geranilgeranil pyrophosphate synthetase 1 GGPS1 (Os)(PubMedID : 27208977)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
10 Sobic.004G164100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.007G143700 immunophilin(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
12 Sobic.010G095200 glutathione S-transferase, N-terminal domain containing protein, expressed -
13 Sobic.002G272100 expressed protein -
14 Sobic.001G475600 prenyltransferase, putative, expressed K02548: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
15 Sobic.002G198000 CRR6, putative, expressed -
16 Sobic.003G069200 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
17 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
18 Sobic.004G311100 -(PubMedID : 29017446)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
19 Sobic.007G165500 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.004G020300 expressed protein -


Gene co-expression network
sample Sobic009G238300 Sobic009G238300 Sobic003G386300 Sobic003G386300 Sobic009G238300--Sobic003G386300 Sobic001G122400 Sobic001G122400 Sobic009G238300--Sobic001G122400 Sobic003G157400 Sobic003G157400 Sobic009G238300--Sobic003G157400 Sobic003G324700 Sobic003G324700 Sobic009G238300--Sobic003G324700 Sobic002G341500 Sobic002G341500 Sobic009G238300--Sobic002G341500 Sobic004G335800 Sobic004G335800 Sobic009G238300--Sobic004G335800 Sobic001G527100 Sobic001G527100 Sobic009G238300--Sobic001G527100 Sobic001G240000 Sobic001G240000 Sobic009G238300--Sobic001G240000 Sobic002G353300 Sobic002G353300 Sobic009G238300--Sobic002G353300 Sobic003G386300--Sobic001G122400 Sobic003G386300--Sobic004G335800 Sobic003G386300--Sobic001G527100 Sobic002G198000 Sobic002G198000 Sobic003G386300--Sobic002G198000 Sobic003G386300--Sobic001G240000 Sobic010G095200 Sobic010G095200 Sobic003G386300--Sobic010G095200 Sobic001G040000 Sobic001G040000 Sobic003G386300--Sobic001G040000 Sobic004G164100 Sobic004G164100 Sobic003G386300--Sobic004G164100 Sobic001G475600 Sobic001G475600 Sobic003G386300--Sobic001G475600 Sobic001G122400--Sobic003G386300 Sobic001G122400--Sobic004G335800 Sobic001G122400--Sobic001G527100 Sobic001G122400--Sobic003G324700 Sobic001G469933 Sobic001G469933 Sobic001G122400--Sobic001G469933 Sobic001G122400--Sobic001G240000 Sobic001G368500 Sobic001G368500 Sobic001G122400--Sobic001G368500 Sobic001G122400--Sobic002G198000 Sobic001G391400 Sobic001G391400 Sobic001G122400--Sobic001G391400 Sobic003G157400--Sobic003G386300 Sobic004G054500 Sobic004G054500 Sobic003G157400--Sobic004G054500 Sobic004G036100 Sobic004G036100 Sobic003G157400--Sobic004G036100 Sobic007G143700 Sobic007G143700 Sobic003G157400--Sobic007G143700 Sobic010G255600 Sobic010G255600 Sobic003G157400--Sobic010G255600 Sobic003G157400--Sobic001G475600 Sobic003G157400--Sobic001G122400 Sobic003G157400--Sobic004G335800 Sobic003G157400--Sobic010G095200 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic003G324700--Sobic004G335800 Sobic006G055800 Sobic006G055800 Sobic003G324700--Sobic006G055800 Sobic002G152800 Sobic002G152800 Sobic003G324700--Sobic002G152800 Sobic003G324700--Sobic003G386300 Sobic003G432500 Sobic003G432500 Sobic003G324700--Sobic003G432500 Sobic003G324700--Sobic001G527100 Sobic004G311100 Sobic004G311100 Sobic002G341500--Sobic004G311100 Sobic002G341500--Sobic003G386300 Sobic002G341500--Sobic007G143700 Sobic002G271700 Sobic002G271700 Sobic002G341500--Sobic002G271700 Sobic001G531200 Sobic001G531200 Sobic002G341500--Sobic001G531200 Sobic002G341500--Sobic004G335800 Sobic002G341500--Sobic001G122400 Sobic008G112300 Sobic008G112300 Sobic002G341500--Sobic008G112300 Sobic002G341500--Sobic001G527100 Sobic004G335800--Sobic001G040000 Sobic004G335800--Sobic001G122400 Sobic004G335800--Sobic003G386300 Sobic004G335800--Sobic001G527100 Sobic004G116100 Sobic004G116100 Sobic004G335800--Sobic004G116100 Sobic004G335800--Sobic003G324700 Sobic004G335800--Sobic007G143700 Sobic004G335800--Sobic001G391400 Sobic004G335800--Sobic001G240000 Sobic001G527100--Sobic001G240000 Sobic001G527100--Sobic001G122400 Sobic001G527100--Sobic002G198000 Sobic001G527100--Sobic004G335800 Sobic001G527100--Sobic003G386300 Sobic001G527100--Sobic004G164100 Sobic001G527100--Sobic001G391400 Sobic001G527100--Sobic001G040000 Sobic003G328200 Sobic003G328200 Sobic001G527100--Sobic003G328200 Sobic001G240000--Sobic001G527100 Sobic001G240000--Sobic001G040000 Sobic001G240000--Sobic001G122400 Sobic001G240000--Sobic003G386300 Sobic001G240000--Sobic001G391400 Sobic002G251400 Sobic002G251400 Sobic001G240000--Sobic002G251400 Sobic001G240000--Sobic004G335800 Sobic001G240000--Sobic003G328200 Sobic001G240000--Sobic002G198000 Sobic002G353300--Sobic001G122400 Sobic002G353300--Sobic003G324700 Sobic002G353300--Sobic003G386300 Sobic002G353300--Sobic004G311100 Sobic002G353300--Sobic004G335800 Sobic001G291900 Sobic001G291900 Sobic002G353300--Sobic001G291900 Sobic004G044200 Sobic004G044200 Sobic002G353300--Sobic004G044200 Sobic002G353300--Sobic001G527100 Sobic002G353300--Sobic002G198000
Octagon: transcription factors


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