Gene annotation
Transcriptome id Sobic.003G120500.1
Synonym Sb03g010180
Functional annotation transmembrane protein 136, putative, expressed
UniProt C5XGG7
Pfam PF03798
Panther DB PTHR31898
NCBI CDD KOG4474; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G35180 : TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
RAP-DB (Rice) LOC_Os01g15770.1 : transmembrane protein 136, putative, expressed
MaizeGDB (Corn) Zm00025a035286
Brachypodium PNT70312 , KQK03748 , KQK03742
Barley HORVU3Hr1G036640.4 , HORVU3Hr1G036640.2 , HORVU3Hr1G036640.3 , HORVU3Hr1G036640.1 , HORVU3Hr1G036600.2 , HORVU3Hr1G036600.3 , HORVU3Hr1G036600.1 , HORVU3Hr1G036600.6 , HORVU3Hr1G036600.7 , HORVU3Hr1G036600.4 , HORVU3Hr1G036600.5
Wheat TraesCS3B02G209100 , TraesCS3D02G184400 , TraesCS3A02G179400 , TraesCS3A02G179500 , TraesCS3D02G184300
Populus -


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cDNA sequences
Sobic.003G120500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G036100 SAM dependent carboxyl methyltransferase, putative, expressed -
2 Sobic.001G453200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.003G069200 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
4 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
6 Sobic.002G207900 WAX2, putative, expressed -
7 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
8 Sobic.005G218201 - -
9 Sobic.010G255600 thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed -
10 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
11 Sobic.007G185100 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
12 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G253800 - -
14 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.005G200600 dirigent, putative, expressed -
16 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
17 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.003G114200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
19 Sobic.004G300800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.001G464700 - -


Gene co-expression network
sample Sobic003G120500 Sobic003G120500 Sobic004G036100 Sobic004G036100 Sobic003G120500--Sobic004G036100 Sobic001G453200 Sobic001G453200 Sobic003G120500--Sobic001G453200 Sobic003G069200 Sobic003G069200 Sobic003G120500--Sobic003G069200 Sobic004G249400 Sobic004G249400 Sobic003G120500--Sobic004G249400 Sobic004G044200 Sobic004G044200 Sobic003G120500--Sobic004G044200 Sobic002G207900 Sobic002G207900 Sobic003G120500--Sobic002G207900 Sobic002G209800 Sobic002G209800 Sobic003G120500--Sobic002G209800 Sobic005G218201 Sobic005G218201 Sobic003G120500--Sobic005G218201 Sobic010G255600 Sobic010G255600 Sobic003G120500--Sobic010G255600 Sobic004G036100--Sobic010G255600 Sobic004G036100--Sobic003G120500 Sobic003G157400 Sobic003G157400 Sobic004G036100--Sobic003G157400 Sobic001G464700 Sobic001G464700 Sobic004G036100--Sobic001G464700 Sobic004G036100--Sobic003G069200 Sobic007G185100 Sobic007G185100 Sobic004G036100--Sobic007G185100 Sobic004G054500 Sobic004G054500 Sobic004G036100--Sobic004G054500 Sobic004G036100--Sobic004G044200 Sobic006G145500 Sobic006G145500 Sobic004G036100--Sobic006G145500 Sobic001G453200--Sobic004G249400 Sobic001G453200--Sobic002G207900 Sobic001G453200--Sobic003G120500 Sobic001G453200--Sobic002G209800 Sobic003G114200 Sobic003G114200 Sobic001G453200--Sobic003G114200 Sobic007G127600 Sobic007G127600 Sobic001G453200--Sobic007G127600 Sobic001G541300 Sobic001G541300 Sobic001G453200--Sobic001G541300 Sobic006G238100 Sobic006G238100 Sobic001G453200--Sobic006G238100 Sobic005G200600 Sobic005G200600 Sobic001G453200--Sobic005G200600 Sobic001G221300 Sobic001G221300 Sobic003G069200--Sobic001G221300 Sobic003G069200--Sobic003G120500 Sobic003G069200--Sobic004G036100 Sobic006G155700 Sobic006G155700 Sobic003G069200--Sobic006G155700 Sobic006G248200 Sobic006G248200 Sobic003G069200--Sobic006G248200 Sobic003G150600 Sobic003G150600 Sobic003G069200--Sobic003G150600 Sobic003G386300 Sobic003G386300 Sobic003G069200--Sobic003G386300 Sobic003G069200--Sobic003G157400 Sobic001G475600 Sobic001G475600 Sobic003G069200--Sobic001G475600 Sobic004G249400--Sobic001G453200 Sobic004G249400--Sobic001G541300 Sobic002G141100 Sobic002G141100 Sobic004G249400--Sobic002G141100 Sobic004G249400--Sobic005G200600 Sobic004G249400--Sobic002G207900 Sobic004G249400--Sobic007G127600 Sobic004G249400--Sobic006G238100 Sobic004G249400--Sobic003G120500 Sobic004G249400--Sobic003G114200 Sobic009G001500 Sobic009G001500 Sobic004G044200--Sobic009G001500 Sobic007G013400 Sobic007G013400 Sobic004G044200--Sobic007G013400 Sobic003G295800 Sobic003G295800 Sobic004G044200--Sobic003G295800 Sobic004G044200--Sobic001G541300 Sobic004G044200--Sobic007G185100 Sobic003G328200 Sobic003G328200 Sobic004G044200--Sobic003G328200 Sobic005G218600 Sobic005G218600 Sobic004G044200--Sobic005G218600 Sobic004G044200--Sobic005G218201 Sobic004G044200--Sobic003G386300 Sobic002G207900--Sobic001G453200 Sobic002G207900--Sobic004G249400 Sobic001G255300 Sobic001G255300 Sobic002G207900--Sobic001G255300 Sobic002G207900--Sobic001G541300 Sobic005G029400 Sobic005G029400 Sobic002G207900--Sobic005G029400 Sobic002G207900--Sobic003G120500 Sobic002G207900--Sobic003G114200 Sobic001G379300 Sobic001G379300 Sobic002G207900--Sobic001G379300 Sobic002G207900--Sobic002G141100 Sobic004G038300 Sobic004G038300 Sobic002G209800--Sobic004G038300 Sobic002G209800--Sobic006G238100 Sobic002G209800--Sobic004G249400 Sobic009G215600 Sobic009G215600 Sobic002G209800--Sobic009G215600 Sobic002G209800--Sobic001G255300 Sobic002G209800--Sobic005G218600 Sobic002G209800--Sobic005G200600 Sobic002G209800--Sobic001G379300 Sobic002G209800--Sobic002G141100 Sobic005G218201--Sobic005G218600 Sobic005G218201--Sobic004G044200 Sobic005G218201--Sobic002G209800 Sobic005G218201--Sobic004G038300 Sobic005G218201--Sobic003G120500 Sobic005G218201--Sobic005G200600 Sobic005G218201--Sobic006G238100 Sobic005G218201--Sobic001G541300 Sobic005G218201--Sobic001G255300 Sobic001G382100 Sobic001G382100 Sobic010G255600--Sobic001G382100 Sobic001G203000 Sobic001G203000 Sobic010G255600--Sobic001G203000 Sobic009G091850 Sobic009G091850 Sobic010G255600--Sobic009G091850 Sobic008G051000 Sobic008G051000 Sobic010G255600--Sobic008G051000 Sobic010G255600--Sobic004G036100 Sobic010G255600--Sobic007G185100 Sobic010G255600--Sobic004G054500 Sobic003G099400 Sobic003G099400 Sobic010G255600--Sobic003G099400 Sobic007G116950 Sobic007G116950 Sobic010G255600--Sobic007G116950
Octagon: transcription factors


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