Gene annotation
Transcriptome id Sobic.003G114200.1
Synonym ATGPAT1, Sb03g009610, GPAT1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glycerol-3-phosphate acyltransferase, putative, expressed
UniProt A0A1B6Q2N1
Pfam -
Panther DB PTHR15486:SF17 PTHR15486
NCBI CDD -
KEGG Orthology K13508; glycerol-3-phosphate acyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01950 : glycerol-3-phosphate acyltransferase 3
RAP-DB (Rice) LOC_Os01g14900.1 : glycerol-3-phosphate acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a023934
Brachypodium -
Barley HORVU5Hr1G022500.1 , HORVU2Hr1G023650.8 , HORVU2Hr1G023650.2 , HORVU2Hr1G023650.3 , HORVU2Hr1G023650.1 , HORVU2Hr1G023650.6 , HORVU2Hr1G023650.7 , HORVU2Hr1G023650.4 , HORVU2Hr1G023650.5
Wheat TraesCS5B02G092200 , TraesCS2D02G136700 , TraesCS6B02G051800 , TraesCS2A02G134500 , TraesCS6B02G052300 , TraesCS2B02G158000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
2 Sobic.007G127600 transferase family protein, putative, expressed -
3 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.002G416950 - -
7 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
8 Sobic.007G009600 expressed protein -
9 Sobic.007G185100 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
10 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
13 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
14 Sobic.001G435600 - -
15 Sobic.002G415300 - -
16 Sobic.010G120200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
17 Sobic.002G415400 - -
18 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
19 Sobic.002G207900 WAX2, putative, expressed -
20 Sobic.010G233800 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24


Gene co-expression network
sample Sobic003G114200 Sobic003G114200 Sobic007G170800 Sobic007G170800 Sobic003G114200--Sobic007G170800 Sobic007G127600 Sobic007G127600 Sobic003G114200--Sobic007G127600 Sobic001G541300 Sobic001G541300 Sobic003G114200--Sobic001G541300 Sobic002G141100 Sobic002G141100 Sobic003G114200--Sobic002G141100 Sobic004G060700 Sobic004G060700 Sobic003G114200--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic003G114200--Sobic002G416950 Sobic008G163200 Sobic008G163200 Sobic003G114200--Sobic008G163200 Sobic007G009600 Sobic007G009600 Sobic003G114200--Sobic007G009600 Sobic007G185100 Sobic007G185100 Sobic003G114200--Sobic007G185100 Sobic007G170800--Sobic004G060700 Sobic007G170800--Sobic003G114200 Sobic007G170800--Sobic007G009600 Sobic007G170800--Sobic002G416950 Sobic007G170800--Sobic008G163200 Sobic001G435600 Sobic001G435600 Sobic007G170800--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic007G170800--Sobic002G415300 Sobic007G170800--Sobic001G541300 Sobic001G379300 Sobic001G379300 Sobic007G170800--Sobic001G379300 Sobic007G127600--Sobic003G114200 Sobic007G127600--Sobic001G541300 Sobic007G127600--Sobic007G170800 Sobic007G127600--Sobic002G416950 Sobic004G249400 Sobic004G249400 Sobic007G127600--Sobic004G249400 Sobic007G127600--Sobic004G060700 Sobic001G076500 Sobic001G076500 Sobic007G127600--Sobic001G076500 Sobic007G127600--Sobic002G141100 Sobic006G238100 Sobic006G238100 Sobic007G127600--Sobic006G238100 Sobic001G541300--Sobic002G141100 Sobic001G541300--Sobic003G114200 Sobic001G541300--Sobic007G170800 Sobic001G541300--Sobic002G416950 Sobic001G541300--Sobic004G060700 Sobic001G541300--Sobic006G238100 Sobic001G541300--Sobic004G249400 Sobic001G541300--Sobic001G379300 Sobic001G541300--Sobic007G009600 Sobic002G141100--Sobic001G541300 Sobic005G200600 Sobic005G200600 Sobic002G141100--Sobic005G200600 Sobic002G141100--Sobic007G170800 Sobic002G141100--Sobic004G060700 Sobic002G141100--Sobic002G416950 Sobic002G141100--Sobic006G238100 Sobic002G141100--Sobic007G009600 Sobic002G141100--Sobic003G114200 Sobic002G141100--Sobic001G379300 Sobic004G060700--Sobic002G416950 Sobic004G060700--Sobic002G415300 Sobic004G060700--Sobic007G170800 Sobic004G060700--Sobic007G009600 Sobic004G060700--Sobic008G163200 Sobic002G415400 Sobic002G415400 Sobic004G060700--Sobic002G415400 Sobic004G060700--Sobic001G435600 Sobic004G060700--Sobic006G238100 Sobic004G060700--Sobic001G379300 Sobic002G416950--Sobic004G060700 Sobic002G416950--Sobic001G379300 Sobic002G416950--Sobic002G415300 Sobic002G416950--Sobic006G238100 Sobic002G416950--Sobic007G009600 Sobic002G416950--Sobic001G435600 Sobic002G416950--Sobic008G163200 Sobic002G416950--Sobic007G170800 Sobic002G416950--Sobic002G415400 Sobic008G163200--Sobic002G415300 Sobic008G163200--Sobic004G060700 Sobic008G163200--Sobic002G415400 Sobic008G163200--Sobic002G416950 Sobic008G163200--Sobic007G170800 Sobic003G068300 Sobic003G068300 Sobic008G163200--Sobic003G068300 Sobic008G163200--Sobic001G379300 Sobic001G255300 Sobic001G255300 Sobic008G163200--Sobic001G255300 Sobic008G163200--Sobic001G435600 Sobic007G009600--Sobic004G060700 Sobic007G009600--Sobic002G416950 Sobic007G009600--Sobic007G170800 Sobic007G009600--Sobic001G379300 Sobic007G009600--Sobic006G238100 Sobic007G009600--Sobic008G163200 Sobic007G009600--Sobic002G415300 Sobic007G009600--Sobic001G435600 Sobic007G009600--Sobic002G415400 Sobic004G317900 Sobic004G317900 Sobic007G185100--Sobic004G317900 Sobic010G255600 Sobic010G255600 Sobic007G185100--Sobic010G255600 Sobic010G233800 Sobic010G233800 Sobic007G185100--Sobic010G233800 Sobic010G215500 Sobic010G215500 Sobic007G185100--Sobic010G215500 Sobic003G295800 Sobic003G295800 Sobic007G185100--Sobic003G295800 Sobic007G185100--Sobic007G170800 Sobic003G328200 Sobic003G328200 Sobic007G185100--Sobic003G328200 Sobic008G030000 Sobic008G030000 Sobic007G185100--Sobic008G030000 Sobic004G076000 Sobic004G076000 Sobic007G185100--Sobic004G076000
Octagon: transcription factors


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