Gene annotation
Transcriptome id Sobic.001G453200.1
Synonym Sb01g042600, G2, POP1, CUT1, CER6, KCS6
Functional annotation 3-ketoacyl-CoA synthase, putative, expressed
UniProt C5WSP8
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF5
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G68530 : 3-ketoacyl-CoA synthase 6
RAP-DB (Rice) LOC_Os03g12030.1 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) Zm00025a006643 , Zm00025a020257 , Zm00025a036645 , Zm00025a042702 , Zm00025a013566 , Zm00025a029505 , Zm00025a044614 , Zm00025a053041 , Zm00025a044659 , Zm00025a032652 , Zm00025a001341 , Zm00025a021922 , Zm00025a000774 , Zm00025a050385 , Zm00025a025466
Brachypodium PNT76138 , KQK18680 , KQK22844 , KQJ88016 , KQK01599 , KQK16807 , KQK23304
Barley HORVU6Hr1G073300.1 , HORVU2Hr1G041520.5 , HORVU3Hr1G054500.1 , HORVU2Hr1G041520.2 , HORVU1Hr1G040420.4 , HORVU1Hr1G040420.1 , HORVU7Hr1G084610.10 , HORVU1Hr1G040420.3 , HORVU1Hr1G040420.2 , HORVU5Hr1G056870.2 , HORVU1Hr1G089710.1 , HORVU1Hr1G089710.2 , HORVU1Hr1G089710.3 , HORVU5Hr1G056870.5 , HORVU5Hr1G056870.4 , HORVU4Hr1G073840.2 , HORVU4Hr1G073840.5 , HORVU4Hr1G073840.6 , HORVU4Hr1G073840.8 , HORVU5Hr1G056870.6 , HORVU1Hr1G086760.1 , HORVU7Hr1G042070.2 , HORVU7Hr1G042070.3 , HORVU7Hr1G042070.1 , HORVU5Hr1G087530.1 , HORVU5Hr1G056870.1 , HORVU4Hr1G067340.4 , HORVU7Hr1G084610.11 , HORVU4Hr1G067340.2 , HORVU4Hr1G067340.3 , HORVU4Hr1G067340.1 , HORVU7Hr1G084610.1 , HORVU7Hr1G084610.2 , HORVU7Hr1G084610.3 , HORVU7Hr1G084610.4 , HORVU7Hr1G084610.5 , HORVU7Hr1G084610.6 , HORVU7Hr1G084610.7 , HORVU7Hr1G084610.8 , HORVU7Hr1G084610.9 , HORVU1Hr1G090730.1 , HORVU4Hr1G076940.2 , HORVU4Hr1G076940.3 , HORVU5Hr1G056870.3
Wheat TraesCS4D02G296400 , TraesCS4A02G065300 , TraesCS1A02G152100 , TraesCS3A02G451100 , TraesCS1D02G148900 , TraesCS4D02G242200 , TraesCS5B02G187900 , TraesCS5D02G195500 , TraesCS4D02G277300 , TraesCS5A02G195500 , TraesCS4B02G297500 , TraesCS6A02G415500 , TraesCS6A02G415500 , TraesCS1B02G169500 , TraesCS4A02G025300 , TraesCS4B02G278800 , TraesCS4A02G007400
Populus -


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cDNA sequences
Sobic.001G453200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.002G207900 WAX2, putative, expressed -
3 Sobic.003G120500 transmembrane protein 136, putative, expressed -
4 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
5 Sobic.003G114200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
6 Sobic.007G127600 transferase family protein, putative, expressed -
7 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.005G200600 dirigent, putative, expressed -
10 Sobic.004G300800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
11 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.004G038300 cycloartenol synthase, putative, expressed -
13 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
14 Sobic.003G095000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
15 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
16 Sobic.009G215600 expressed protein -
17 Sobic.003G069200 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
18 Sobic.009G059100 Cupin domain containing protein, expressed -
19 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase


Gene co-expression network
sample Sobic001G453200 Sobic001G453200 Sobic004G249400 Sobic004G249400 Sobic001G453200--Sobic004G249400 Sobic002G207900 Sobic002G207900 Sobic001G453200--Sobic002G207900 Sobic003G120500 Sobic003G120500 Sobic001G453200--Sobic003G120500 Sobic002G209800 Sobic002G209800 Sobic001G453200--Sobic002G209800 Sobic003G114200 Sobic003G114200 Sobic001G453200--Sobic003G114200 Sobic007G127600 Sobic007G127600 Sobic001G453200--Sobic007G127600 Sobic001G541300 Sobic001G541300 Sobic001G453200--Sobic001G541300 Sobic006G238100 Sobic006G238100 Sobic001G453200--Sobic006G238100 Sobic005G200600 Sobic005G200600 Sobic001G453200--Sobic005G200600 Sobic004G249400--Sobic001G453200 Sobic004G249400--Sobic001G541300 Sobic002G141100 Sobic002G141100 Sobic004G249400--Sobic002G141100 Sobic004G249400--Sobic005G200600 Sobic004G249400--Sobic002G207900 Sobic004G249400--Sobic007G127600 Sobic004G249400--Sobic006G238100 Sobic004G249400--Sobic003G120500 Sobic004G249400--Sobic003G114200 Sobic002G207900--Sobic001G453200 Sobic002G207900--Sobic004G249400 Sobic001G255300 Sobic001G255300 Sobic002G207900--Sobic001G255300 Sobic002G207900--Sobic001G541300 Sobic005G029400 Sobic005G029400 Sobic002G207900--Sobic005G029400 Sobic002G207900--Sobic003G120500 Sobic002G207900--Sobic003G114200 Sobic001G379300 Sobic001G379300 Sobic002G207900--Sobic001G379300 Sobic002G207900--Sobic002G141100 Sobic004G036100 Sobic004G036100 Sobic003G120500--Sobic004G036100 Sobic003G120500--Sobic001G453200 Sobic003G069200 Sobic003G069200 Sobic003G120500--Sobic003G069200 Sobic003G120500--Sobic004G249400 Sobic004G044200 Sobic004G044200 Sobic003G120500--Sobic004G044200 Sobic003G120500--Sobic002G207900 Sobic003G120500--Sobic002G209800 Sobic005G218201 Sobic005G218201 Sobic003G120500--Sobic005G218201 Sobic010G255600 Sobic010G255600 Sobic003G120500--Sobic010G255600 Sobic004G038300 Sobic004G038300 Sobic002G209800--Sobic004G038300 Sobic002G209800--Sobic006G238100 Sobic002G209800--Sobic004G249400 Sobic009G215600 Sobic009G215600 Sobic002G209800--Sobic009G215600 Sobic002G209800--Sobic001G255300 Sobic005G218600 Sobic005G218600 Sobic002G209800--Sobic005G218600 Sobic002G209800--Sobic005G200600 Sobic002G209800--Sobic001G379300 Sobic002G209800--Sobic002G141100 Sobic007G170800 Sobic007G170800 Sobic003G114200--Sobic007G170800 Sobic003G114200--Sobic007G127600 Sobic003G114200--Sobic001G541300 Sobic003G114200--Sobic002G141100 Sobic004G060700 Sobic004G060700 Sobic003G114200--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic003G114200--Sobic002G416950 Sobic008G163200 Sobic008G163200 Sobic003G114200--Sobic008G163200 Sobic007G009600 Sobic007G009600 Sobic003G114200--Sobic007G009600 Sobic007G185100 Sobic007G185100 Sobic003G114200--Sobic007G185100 Sobic007G127600--Sobic003G114200 Sobic007G127600--Sobic001G541300 Sobic007G127600--Sobic007G170800 Sobic007G127600--Sobic002G416950 Sobic007G127600--Sobic004G249400 Sobic007G127600--Sobic004G060700 Sobic001G076500 Sobic001G076500 Sobic007G127600--Sobic001G076500 Sobic007G127600--Sobic002G141100 Sobic007G127600--Sobic006G238100 Sobic001G541300--Sobic002G141100 Sobic001G541300--Sobic003G114200 Sobic001G541300--Sobic007G170800 Sobic001G541300--Sobic002G416950 Sobic001G541300--Sobic004G060700 Sobic001G541300--Sobic006G238100 Sobic001G541300--Sobic004G249400 Sobic001G541300--Sobic001G379300 Sobic001G541300--Sobic007G009600 Sobic006G238100--Sobic001G379300 Sobic006G238100--Sobic002G416950 Sobic006G238100--Sobic004G060700 Sobic006G238100--Sobic001G255300 Sobic006G238100--Sobic005G200600 Sobic006G238100--Sobic007G009600 Sobic002G415300 Sobic002G415300 Sobic006G238100--Sobic002G415300 Sobic006G238100--Sobic008G163200 Sobic002G415400 Sobic002G415400 Sobic006G238100--Sobic002G415400 Sobic005G200600--Sobic006G238100 Sobic005G200600--Sobic002G141100 Sobic005G200600--Sobic004G060700 Sobic005G200600--Sobic002G416950 Sobic009G059100 Sobic009G059100 Sobic005G200600--Sobic009G059100 Sobic005G200600--Sobic004G249400 Sobic005G200600--Sobic007G009600 Sobic005G200600--Sobic001G541300 Sobic005G200600--Sobic001G379300
Octagon: transcription factors


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