Gene annotation
Transcriptome id Sobic.009G083300.1
Synonym Sb09g007330, ATWBC12, WBC12, D3, ABCG12, CER5
Functional annotation white-brown complex homolog protein 12, putative, expressed
UniProt C5YV41
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF186
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G21090 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os05g13520.1 : white-brown complex homolog protein 12, putative, expressed
MaizeGDB (Corn) Zm00025a037579
Brachypodium PNT71605 , KQK06998
Barley HORVU1Hr1G030200.2 , HORVU1Hr1G030200.3 , HORVU1Hr1G030200.1 , HORVU1Hr1G030200.4
Wheat TraesCS1B02G147700 , TraesCS1A02G126900 , TraesCS1D02G126600
Populus -


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cDNA sequences
Sobic.009G083300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G069200 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
2 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
3 Sobic.006G155700 ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed -
4 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
5 Sobic.002G064400 expressed protein -
6 Sobic.005G084000 expressed protein -
7 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
8 Sobic.001G142400 RIO1 family protein, expressed -
9 Sobic.001G099000 expressed protein -
10 Sobic.004G040600 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
11 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
12 Sobic.001G495300 expressed protein -
13 Sobic.008G131700 PsbP, putative, expressed -
14 Sobic.002G242600 expressed protein -
15 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
17 Sobic.007G210600 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.006G248200 - -
19 Sobic.001G475600 prenyltransferase, putative, expressed K02548: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
20 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G083300 Sobic009G083300 Sobic003G069200 Sobic003G069200 Sobic009G083300--Sobic003G069200 Sobic008G008500 Sobic008G008500 Sobic009G083300--Sobic008G008500 Sobic006G155700 Sobic006G155700 Sobic009G083300--Sobic006G155700 Sobic004G015700 Sobic004G015700 Sobic009G083300--Sobic004G015700 Sobic002G064400 Sobic002G064400 Sobic009G083300--Sobic002G064400 Sobic005G084000 Sobic005G084000 Sobic009G083300--Sobic005G084000 Sobic003G071600 Sobic003G071600 Sobic009G083300--Sobic003G071600 Sobic001G142400 Sobic001G142400 Sobic009G083300--Sobic001G142400 Sobic001G099000 Sobic001G099000 Sobic009G083300--Sobic001G099000 Sobic001G221300 Sobic001G221300 Sobic003G069200--Sobic001G221300 Sobic003G120500 Sobic003G120500 Sobic003G069200--Sobic003G120500 Sobic004G036100 Sobic004G036100 Sobic003G069200--Sobic004G036100 Sobic003G069200--Sobic006G155700 Sobic006G248200 Sobic006G248200 Sobic003G069200--Sobic006G248200 Sobic003G150600 Sobic003G150600 Sobic003G069200--Sobic003G150600 Sobic003G386300 Sobic003G386300 Sobic003G069200--Sobic003G386300 Sobic003G157400 Sobic003G157400 Sobic003G069200--Sobic003G157400 Sobic001G475600 Sobic001G475600 Sobic003G069200--Sobic001G475600 Sobic008G008500--Sobic002G064400 Sobic008G008500--Sobic009G083300 Sobic007G123200 Sobic007G123200 Sobic008G008500--Sobic007G123200 Sobic008G130700 Sobic008G130700 Sobic008G008500--Sobic008G130700 Sobic002G190100 Sobic002G190100 Sobic008G008500--Sobic002G190100 Sobic007G090415 Sobic007G090415 Sobic008G008500--Sobic007G090415 Sobic008G008500--Sobic001G142400 Sobic008G008500--Sobic003G071600 Sobic006G060500 Sobic006G060500 Sobic008G008500--Sobic006G060500 Sobic006G155700--Sobic003G069200 Sobic006G155700--Sobic001G221300 Sobic006G155700--Sobic009G083300 Sobic002G198600 Sobic002G198600 Sobic006G155700--Sobic002G198600 Sobic003G162900 Sobic003G162900 Sobic006G155700--Sobic003G162900 Sobic006G155700--Sobic003G150600 Sobic004G040600 Sobic004G040600 Sobic006G155700--Sobic004G040600 Sobic006G054300 Sobic006G054300 Sobic006G155700--Sobic006G054300 Sobic003G433900 Sobic003G433900 Sobic006G155700--Sobic003G433900 Sobic006G263800 Sobic006G263800 Sobic004G015700--Sobic006G263800 Sobic003G383500 Sobic003G383500 Sobic004G015700--Sobic003G383500 Sobic004G015700--Sobic009G083300 Sobic007G013400 Sobic007G013400 Sobic004G015700--Sobic007G013400 Sobic004G015700--Sobic001G099000 Sobic001G236800 Sobic001G236800 Sobic004G015700--Sobic001G236800 Sobic004G015700--Sobic002G190100 Sobic009G212000 Sobic009G212000 Sobic004G015700--Sobic009G212000 Sobic003G261200 Sobic003G261200 Sobic004G015700--Sobic003G261200 Sobic002G064400--Sobic008G008500 Sobic002G064400--Sobic002G190100 Sobic001G215300 Sobic001G215300 Sobic002G064400--Sobic001G215300 Sobic002G064400--Sobic001G236800 Sobic002G064400--Sobic009G083300 Sobic007G206100 Sobic007G206100 Sobic002G064400--Sobic007G206100 Sobic002G242600 Sobic002G242600 Sobic002G064400--Sobic002G242600 Sobic002G064400--Sobic001G142400 Sobic002G064400--Sobic004G015700 Sobic001G495300 Sobic001G495300 Sobic005G084000--Sobic001G495300 Sobic007G210600 Sobic007G210600 Sobic005G084000--Sobic007G210600 Sobic008G131700 Sobic008G131700 Sobic005G084000--Sobic008G131700 Sobic005G084000--Sobic001G142400 Sobic003G074700 Sobic003G074700 Sobic005G084000--Sobic003G074700 Sobic004G143400 Sobic004G143400 Sobic005G084000--Sobic004G143400 Sobic005G084000--Sobic009G083300 Sobic007G201400 Sobic007G201400 Sobic005G084000--Sobic007G201400 Sobic005G084000--Sobic003G069200 Sobic001G296400 Sobic001G296400 Sobic003G071600--Sobic001G296400 Sobic003G071600--Sobic009G083300 Sobic003G071600--Sobic002G064400 Sobic003G071600--Sobic008G008500 Sobic003G265500 Sobic003G265500 Sobic003G071600--Sobic003G265500 Sobic004G208600 Sobic004G208600 Sobic003G071600--Sobic004G208600 Sobic003G071600--Sobic005G084000 Sobic001G543700 Sobic001G543700 Sobic003G071600--Sobic001G543700 Sobic003G071600--Sobic004G015700 Sobic001G142400--Sobic006G263800 Sobic001G142400--Sobic005G084000 Sobic001G142400--Sobic001G215300 Sobic001G142400--Sobic002G190100 Sobic005G022800 Sobic005G022800 Sobic001G142400--Sobic005G022800 Sobic001G142400--Sobic007G201400 Sobic008G021700 Sobic008G021700 Sobic001G142400--Sobic008G021700 Sobic001G142400--Sobic001G236800 Sobic002G140000 Sobic002G140000 Sobic001G142400--Sobic002G140000 Sobic002G158800 Sobic002G158800 Sobic001G099000--Sobic002G158800 Sobic005G184300 Sobic005G184300 Sobic001G099000--Sobic005G184300 Sobic007G015300 Sobic007G015300 Sobic001G099000--Sobic007G015300 Sobic002G081500 Sobic002G081500 Sobic001G099000--Sobic002G081500 Sobic004G255500 Sobic004G255500 Sobic001G099000--Sobic004G255500 Sobic010G027200 Sobic010G027200 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic003G373300 Sobic003G373300 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000
Octagon: transcription factors


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