Gene annotation
Transcriptome id Sobic.004G015700.1
Synonym RK3, Sb04g001480, ARK3
Functional annotation serine/threonine-protein kinase receptor precursor, putative, expressed
UniProt A0A1Z5RKG3
Pfam PF08276 PF00954 PF01453 PF07714
Panther DB PTHR27002 PTHR27002:SF69
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os03g35600.1 : serine/threonine-protein kinase receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a046931
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G015700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
2 Sobic.003G383500 rhodanese-like, putative, expressed -
3 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
4 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
5 Sobic.001G099000 expressed protein -
6 Sobic.001G236800 tRNA methyltransferase, putative, expressed K00927: PGK, phosphoglycerate kinase
7 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
9 Sobic.003G261200 formyl transferase, putative, expressed K00604: MTFMT, methionyl-tRNA formyltransferase
10 Sobic.001G475600 prenyltransferase, putative, expressed K02548: 1,4-dihydroxy-2-naphthoate polyprenyltransferase
11 Sobic.010G095200 glutathione S-transferase, N-terminal domain containing protein, expressed -
12 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
13 Sobic.002G064400 expressed protein -
14 Sobic.001G142400 RIO1 family protein, expressed -
15 Sobic.003G030900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G047300 Minichromosome maintenance (MCM2/3/5) family protein("PubMedID : 26759170,PubMedID : 24597475")@EMB1688, putative, expressed K06949: rsgA, ribosome biogenesis GTPase / thiamine phosphate phosphatase
17 Sobic.001G333000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
18 Sobic.001G531200 methylthioribose kinase, putative, expressed -
19 Sobic.002G242600 expressed protein -
20 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase


Gene co-expression network
sample Sobic004G015700 Sobic004G015700 Sobic006G263800 Sobic006G263800 Sobic004G015700--Sobic006G263800 Sobic003G383500 Sobic003G383500 Sobic004G015700--Sobic003G383500 Sobic009G083300 Sobic009G083300 Sobic004G015700--Sobic009G083300 Sobic007G013400 Sobic007G013400 Sobic004G015700--Sobic007G013400 Sobic001G099000 Sobic001G099000 Sobic004G015700--Sobic001G099000 Sobic001G236800 Sobic001G236800 Sobic004G015700--Sobic001G236800 Sobic002G190100 Sobic002G190100 Sobic004G015700--Sobic002G190100 Sobic009G212000 Sobic009G212000 Sobic004G015700--Sobic009G212000 Sobic003G261200 Sobic003G261200 Sobic004G015700--Sobic003G261200 Sobic007G116100 Sobic007G116100 Sobic006G263800--Sobic007G116100 Sobic006G263800--Sobic002G190100 Sobic002G140000 Sobic002G140000 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic005G022800 Sobic005G022800 Sobic006G263800--Sobic005G022800 Sobic006G263800--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic006G263800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic006G263800--Sobic006G237100 Sobic001G120000 Sobic001G120000 Sobic006G263800--Sobic001G120000 Sobic003G383500--Sobic007G013400 Sobic009G001500 Sobic009G001500 Sobic003G383500--Sobic009G001500 Sobic003G295800 Sobic003G295800 Sobic003G383500--Sobic003G295800 Sobic007G211100 Sobic007G211100 Sobic003G383500--Sobic007G211100 Sobic003G383500--Sobic003G261200 Sobic004G044000 Sobic004G044000 Sobic003G383500--Sobic004G044000 Sobic003G383600 Sobic003G383600 Sobic003G383500--Sobic003G383600 Sobic005G110481 Sobic005G110481 Sobic003G383500--Sobic005G110481 Sobic004G109000 Sobic004G109000 Sobic003G383500--Sobic004G109000 Sobic003G069200 Sobic003G069200 Sobic009G083300--Sobic003G069200 Sobic008G008500 Sobic008G008500 Sobic009G083300--Sobic008G008500 Sobic006G155700 Sobic006G155700 Sobic009G083300--Sobic006G155700 Sobic009G083300--Sobic004G015700 Sobic002G064400 Sobic002G064400 Sobic009G083300--Sobic002G064400 Sobic005G084000 Sobic005G084000 Sobic009G083300--Sobic005G084000 Sobic003G071600 Sobic003G071600 Sobic009G083300--Sobic003G071600 Sobic001G142400 Sobic001G142400 Sobic009G083300--Sobic001G142400 Sobic009G083300--Sobic001G099000 Sobic007G013400--Sobic003G383500 Sobic007G013400--Sobic003G295800 Sobic007G013400--Sobic009G001500 Sobic007G013400--Sobic003G261200 Sobic001G475600 Sobic001G475600 Sobic007G013400--Sobic001G475600 Sobic002G251400 Sobic002G251400 Sobic007G013400--Sobic002G251400 Sobic007G013400--Sobic003G383600 Sobic001G040000 Sobic001G040000 Sobic007G013400--Sobic001G040000 Sobic007G013400--Sobic007G211100 Sobic002G158800 Sobic002G158800 Sobic001G099000--Sobic002G158800 Sobic005G184300 Sobic005G184300 Sobic001G099000--Sobic005G184300 Sobic007G015300 Sobic007G015300 Sobic001G099000--Sobic007G015300 Sobic002G081500 Sobic002G081500 Sobic001G099000--Sobic002G081500 Sobic004G255500 Sobic004G255500 Sobic001G099000--Sobic004G255500 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic003G373300 Sobic003G373300 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic001G236800--Sobic004G015700 Sobic001G236800--Sobic002G064400 Sobic001G236800--Sobic001G142400 Sobic001G215300 Sobic001G215300 Sobic001G236800--Sobic001G215300 Sobic007G206100 Sobic007G206100 Sobic001G236800--Sobic007G206100 Sobic001G236800--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic001G236800--Sobic004G151900 Sobic004G246800 Sobic004G246800 Sobic001G236800--Sobic004G246800 Sobic010G157700 Sobic010G157700 Sobic001G236800--Sobic010G157700 Sobic006G025700 Sobic006G025700 Sobic002G190100--Sobic006G025700 Sobic002G190100--Sobic006G263800 Sobic008G130700 Sobic008G130700 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic002G190100--Sobic001G120000 Sobic002G305700 Sobic002G305700 Sobic009G212000--Sobic002G305700 Sobic003G202300 Sobic003G202300 Sobic009G212000--Sobic003G202300 Sobic004G191200 Sobic004G191200 Sobic009G212000--Sobic004G191200 Sobic009G212000--Sobic002G190100 Sobic003G256200 Sobic003G256200 Sobic009G212000--Sobic003G256200 Sobic010G095200 Sobic010G095200 Sobic009G212000--Sobic010G095200 Sobic001G453300 Sobic001G453300 Sobic009G212000--Sobic001G453300 Sobic004G298100 Sobic004G298100 Sobic009G212000--Sobic004G298100 Sobic002G200200 Sobic002G200200 Sobic009G212000--Sobic002G200200 Sobic003G261200--Sobic007G013400 Sobic009G130800 Sobic009G130800 Sobic003G261200--Sobic009G130800 Sobic003G261200--Sobic003G383500 Sobic003G261200--Sobic003G295800 Sobic003G261200--Sobic010G095200 Sobic003G261200--Sobic009G001500 Sobic007G090537 Sobic007G090537 Sobic003G261200--Sobic007G090537 Sobic003G261200--Sobic007G211100 Sobic001G069500 Sobic001G069500 Sobic003G261200--Sobic001G069500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.