Gene annotation
Transcriptome id Sobic.001G142400.1
Synonym Sb01g012400
Functional annotation RIO1 family protein, expressed
UniProt C5WQA8
Pfam PF06293
Panther DB PTHR24056 PTHR24056:SF195
NCBI CDD KOG0594; Protein kinase PCTAIRE and related kinases
KEGG Orthology -
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0016020membrane GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G63370 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g47880.1 : cell division control protein 2 homolog 3, putative, expressed
MaizeGDB (Corn) Zm00025a017155 , Zm00025a017154 , Zm00025a017153 , Zm00025a017152 , Zm00025a017149
Brachypodium KQK22927
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
2 Sobic.005G084000 expressed protein -
3 Sobic.001G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed -
4 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.005G022800 GTP binding protein, putative, expressed -
6 Sobic.007G201400 pentatricopeptide, putative, expressed -
7 Sobic.008G021700 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
8 Sobic.001G236800 tRNA methyltransferase, putative, expressed K00927: PGK, phosphoglycerate kinase
9 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
10 Sobic.002G064400 expressed protein -
11 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
12 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
13 Sobic.004G151900 - -
14 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
15 Sobic.001G099000 expressed protein -
16 Sobic.008G130700 expressed protein -
17 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.006G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
19 Sobic.007G210600 ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1


Gene co-expression network
sample Sobic001G142400 Sobic001G142400 Sobic006G263800 Sobic006G263800 Sobic001G142400--Sobic006G263800 Sobic005G084000 Sobic005G084000 Sobic001G142400--Sobic005G084000 Sobic001G215300 Sobic001G215300 Sobic001G142400--Sobic001G215300 Sobic002G190100 Sobic002G190100 Sobic001G142400--Sobic002G190100 Sobic005G022800 Sobic005G022800 Sobic001G142400--Sobic005G022800 Sobic007G201400 Sobic007G201400 Sobic001G142400--Sobic007G201400 Sobic008G021700 Sobic008G021700 Sobic001G142400--Sobic008G021700 Sobic001G236800 Sobic001G236800 Sobic001G142400--Sobic001G236800 Sobic002G140000 Sobic002G140000 Sobic001G142400--Sobic002G140000 Sobic007G116100 Sobic007G116100 Sobic006G263800--Sobic007G116100 Sobic006G263800--Sobic002G190100 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic006G263800--Sobic005G022800 Sobic001G099000 Sobic001G099000 Sobic006G263800--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic006G263800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic006G263800--Sobic006G237100 Sobic001G120000 Sobic001G120000 Sobic006G263800--Sobic001G120000 Sobic001G495300 Sobic001G495300 Sobic005G084000--Sobic001G495300 Sobic007G210600 Sobic007G210600 Sobic005G084000--Sobic007G210600 Sobic008G131700 Sobic008G131700 Sobic005G084000--Sobic008G131700 Sobic005G084000--Sobic001G142400 Sobic003G074700 Sobic003G074700 Sobic005G084000--Sobic003G074700 Sobic004G143400 Sobic004G143400 Sobic005G084000--Sobic004G143400 Sobic009G083300 Sobic009G083300 Sobic005G084000--Sobic009G083300 Sobic005G084000--Sobic007G201400 Sobic003G069200 Sobic003G069200 Sobic005G084000--Sobic003G069200 Sobic004G109000 Sobic004G109000 Sobic001G215300--Sobic004G109000 Sobic001G215300--Sobic001G142400 Sobic002G064400 Sobic002G064400 Sobic001G215300--Sobic002G064400 Sobic001G215300--Sobic002G190100 Sobic008G130700 Sobic008G130700 Sobic001G215300--Sobic008G130700 Sobic001G215300--Sobic001G236800 Sobic001G188600 Sobic001G188600 Sobic001G215300--Sobic001G188600 Sobic007G090415 Sobic007G090415 Sobic001G215300--Sobic007G090415 Sobic006G114300 Sobic006G114300 Sobic001G215300--Sobic006G114300 Sobic006G025700 Sobic006G025700 Sobic002G190100--Sobic006G025700 Sobic002G190100--Sobic006G263800 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic002G190100--Sobic001G120000 Sobic005G022800--Sobic002G140000 Sobic005G022800--Sobic006G263800 Sobic004G255500 Sobic004G255500 Sobic005G022800--Sobic004G255500 Sobic003G373300 Sobic003G373300 Sobic005G022800--Sobic003G373300 Sobic005G197300 Sobic005G197300 Sobic005G022800--Sobic005G197300 Sobic005G022800--Sobic001G099000 Sobic005G022800--Sobic007G116100 Sobic005G022800--Sobic010G027200 Sobic005G022800--Sobic008G021700 Sobic007G201400--Sobic003G074700 Sobic007G201400--Sobic001G495300 Sobic007G201400--Sobic001G142400 Sobic003G114100 Sobic003G114100 Sobic007G201400--Sobic003G114100 Sobic007G201400--Sobic008G131700 Sobic007G201400--Sobic005G084000 Sobic007G201400--Sobic005G022800 Sobic007G201400--Sobic007G210600 Sobic007G201400--Sobic001G099000 Sobic004G151900 Sobic004G151900 Sobic008G021700--Sobic004G151900 Sobic009G251300 Sobic009G251300 Sobic008G021700--Sobic009G251300 Sobic008G021700--Sobic005G022800 Sobic004G246800 Sobic004G246800 Sobic008G021700--Sobic004G246800 Sobic001G076200 Sobic001G076200 Sobic008G021700--Sobic001G076200 Sobic002G209600 Sobic002G209600 Sobic008G021700--Sobic002G209600 Sobic008G021700--Sobic001G142400 Sobic005G077933 Sobic005G077933 Sobic008G021700--Sobic005G077933 Sobic001G061600 Sobic001G061600 Sobic008G021700--Sobic001G061600 Sobic004G015700 Sobic004G015700 Sobic001G236800--Sobic004G015700 Sobic001G236800--Sobic002G064400 Sobic001G236800--Sobic001G142400 Sobic001G236800--Sobic001G215300 Sobic007G206100 Sobic007G206100 Sobic001G236800--Sobic007G206100 Sobic008G008500 Sobic008G008500 Sobic001G236800--Sobic008G008500 Sobic001G236800--Sobic004G151900 Sobic001G236800--Sobic004G246800 Sobic010G157700 Sobic010G157700 Sobic001G236800--Sobic010G157700 Sobic002G140000--Sobic010G027200 Sobic002G140000--Sobic007G116100 Sobic007G015300 Sobic007G015300 Sobic002G140000--Sobic007G015300 Sobic002G140000--Sobic005G022800 Sobic002G140000--Sobic006G237100 Sobic002G140000--Sobic006G263800 Sobic002G140000--Sobic001G099000 Sobic001G375000 Sobic001G375000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400
Octagon: transcription factors


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