Gene annotation
Transcriptome id Sobic.002G064400.1
Synonym Sb02g005370
Functional annotation expressed protein
UniProt C5XBX2
Pfam -
Panther DB PTHR33880 PTHR33880:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14100 : transferases, transferring glycosyl groups
RAP-DB (Rice) LOC_Os07g09140.1 : expressed protein
MaizeGDB (Corn) Zm00025a045273
Brachypodium KQK20500
Barley HORVU6Hr1G013620.4 , HORVU6Hr1G013620.1 , HORVU6Hr1G013620.2 , HORVU6Hr1G013620.3
Wheat TraesCS3D02G085000 , TraesCS3B02G099800 , TraesCS6A02G077500 , TraesCS6B02G104300 , TraesCSU02G025800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
2 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed -
4 Sobic.001G236800 tRNA methyltransferase, putative, expressed K00927: PGK, phosphoglycerate kinase
5 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
6 Sobic.007G206100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.002G242600 expressed protein -
8 Sobic.001G142400 RIO1 family protein, expressed -
9 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
10 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
11 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
12 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
13 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
14 Sobic.003G383500 rhodanese-like, putative, expressed -
15 Sobic.006G249100 expressed protein -
16 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
17 Sobic.003G030900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
20 Sobic.003G261200 formyl transferase, putative, expressed K00604: MTFMT, methionyl-tRNA formyltransferase


Gene co-expression network
sample Sobic002G064400 Sobic002G064400 Sobic008G008500 Sobic008G008500 Sobic002G064400--Sobic008G008500 Sobic002G190100 Sobic002G190100 Sobic002G064400--Sobic002G190100 Sobic001G215300 Sobic001G215300 Sobic002G064400--Sobic001G215300 Sobic001G236800 Sobic001G236800 Sobic002G064400--Sobic001G236800 Sobic009G083300 Sobic009G083300 Sobic002G064400--Sobic009G083300 Sobic007G206100 Sobic007G206100 Sobic002G064400--Sobic007G206100 Sobic002G242600 Sobic002G242600 Sobic002G064400--Sobic002G242600 Sobic001G142400 Sobic001G142400 Sobic002G064400--Sobic001G142400 Sobic004G015700 Sobic004G015700 Sobic002G064400--Sobic004G015700 Sobic008G008500--Sobic002G064400 Sobic008G008500--Sobic009G083300 Sobic007G123200 Sobic007G123200 Sobic008G008500--Sobic007G123200 Sobic008G130700 Sobic008G130700 Sobic008G008500--Sobic008G130700 Sobic008G008500--Sobic002G190100 Sobic007G090415 Sobic007G090415 Sobic008G008500--Sobic007G090415 Sobic008G008500--Sobic001G142400 Sobic003G071600 Sobic003G071600 Sobic008G008500--Sobic003G071600 Sobic006G060500 Sobic006G060500 Sobic008G008500--Sobic006G060500 Sobic006G025700 Sobic006G025700 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic002G190100--Sobic008G130700 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic001G120000 Sobic001G120000 Sobic002G190100--Sobic001G120000 Sobic004G109000 Sobic004G109000 Sobic001G215300--Sobic004G109000 Sobic001G215300--Sobic001G142400 Sobic001G215300--Sobic002G064400 Sobic001G215300--Sobic002G190100 Sobic001G215300--Sobic008G130700 Sobic001G215300--Sobic001G236800 Sobic001G188600 Sobic001G188600 Sobic001G215300--Sobic001G188600 Sobic001G215300--Sobic007G090415 Sobic006G114300 Sobic006G114300 Sobic001G215300--Sobic006G114300 Sobic001G236800--Sobic004G015700 Sobic001G236800--Sobic002G064400 Sobic001G236800--Sobic001G142400 Sobic001G236800--Sobic001G215300 Sobic001G236800--Sobic007G206100 Sobic001G236800--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic001G236800--Sobic004G151900 Sobic004G246800 Sobic004G246800 Sobic001G236800--Sobic004G246800 Sobic010G157700 Sobic010G157700 Sobic001G236800--Sobic010G157700 Sobic003G069200 Sobic003G069200 Sobic009G083300--Sobic003G069200 Sobic009G083300--Sobic008G008500 Sobic006G155700 Sobic006G155700 Sobic009G083300--Sobic006G155700 Sobic009G083300--Sobic004G015700 Sobic009G083300--Sobic002G064400 Sobic005G084000 Sobic005G084000 Sobic009G083300--Sobic005G084000 Sobic009G083300--Sobic003G071600 Sobic009G083300--Sobic001G142400 Sobic001G099000 Sobic001G099000 Sobic009G083300--Sobic001G099000 Sobic007G206100--Sobic002G064400 Sobic007G206100--Sobic001G236800 Sobic007G206100--Sobic008G008500 Sobic007G206100--Sobic002G190100 Sobic007G206100--Sobic004G246800 Sobic007G206100--Sobic001G142400 Sobic003G042100 Sobic003G042100 Sobic007G206100--Sobic003G042100 Sobic007G206100--Sobic004G151900 Sobic007G206100--Sobic001G215300 Sobic002G242600--Sobic004G044000 Sobic007G013400 Sobic007G013400 Sobic002G242600--Sobic007G013400 Sobic003G030900 Sobic003G030900 Sobic002G242600--Sobic003G030900 Sobic003G383500 Sobic003G383500 Sobic002G242600--Sobic003G383500 Sobic009G001500 Sobic009G001500 Sobic002G242600--Sobic009G001500 Sobic002G242600--Sobic002G190100 Sobic002G242600--Sobic001G027600 Sobic001G475600 Sobic001G475600 Sobic002G242600--Sobic001G475600 Sobic006G248200 Sobic006G248200 Sobic002G242600--Sobic006G248200 Sobic001G142400--Sobic006G263800 Sobic001G142400--Sobic005G084000 Sobic001G142400--Sobic001G215300 Sobic001G142400--Sobic002G190100 Sobic005G022800 Sobic005G022800 Sobic001G142400--Sobic005G022800 Sobic007G201400 Sobic007G201400 Sobic001G142400--Sobic007G201400 Sobic008G021700 Sobic008G021700 Sobic001G142400--Sobic008G021700 Sobic001G142400--Sobic001G236800 Sobic002G140000 Sobic002G140000 Sobic001G142400--Sobic002G140000 Sobic004G015700--Sobic006G263800 Sobic004G015700--Sobic003G383500 Sobic004G015700--Sobic009G083300 Sobic004G015700--Sobic007G013400 Sobic004G015700--Sobic001G099000 Sobic004G015700--Sobic001G236800 Sobic004G015700--Sobic002G190100 Sobic009G212000 Sobic009G212000 Sobic004G015700--Sobic009G212000 Sobic003G261200 Sobic003G261200 Sobic004G015700--Sobic003G261200
Octagon: transcription factors


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