Gene annotation
Transcriptome id Sobic.001G482300.1
Synonym FDH, KCS10, Sb01g045150
Functional annotation 3-ketoacyl-CoA synthase 10, putative, expressed
UniProt C5WVS4
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF2
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT2G26250 : 3-ketoacyl-CoA synthase 10
RAP-DB (Rice) LOC_Os03g08360.1 : 3-ketoacyl-CoA synthase 10, putative, expressed
MaizeGDB (Corn) Zm00025a051234 , Zm00025a000930 , Zm00025a020257 , Zm00025a001551 , Zm00025a029505 , Zm00025a044614 , Zm00025a044659 , Zm00025a003809 , Zm00025a036645 , Zm00025a052892
Brachypodium KQK04806 , KQJ96727 , KQK23304
Barley HORVU4Hr1G076940.2 , HORVU4Hr1G076940.1 , HORVU1Hr1G089710.1 , HORVU1Hr1G089710.2 , HORVU1Hr1G089710.3 , HORVU7Hr1G084610.10 , HORVU7Hr1G084610.11 , HORVU7Hr1G084610.1 , HORVU7Hr1G084610.2 , HORVU7Hr1G084610.3 , HORVU7Hr1G084610.4 , HORVU7Hr1G084610.5 , HORVU7Hr1G084610.6 , HORVU7Hr1G084610.7 , HORVU7Hr1G084610.8 , HORVU7Hr1G084610.9 , HORVU1Hr1G090730.1 , HORVU4Hr1G076940.4 , HORVU4Hr1G076940.3 , HORVU4Hr1G063420.5 , HORVU4Hr1G063420.4 , HORVU4Hr1G063420.3 , HORVU4Hr1G063420.2 , HORVU4Hr1G063420.1
Wheat TraesCS4D02G296400 , TraesCS6D02G071600 , TraesCS6A02G073300 , TraesCS4A02G164400 , TraesCS3B02G313800 , TraesCS6B02G098300 , TraesCS4D02G148300 , TraesCS4B02G297500 , TraesCS4A02G007400
Populus -


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cDNA sequences
Sobic.001G482300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
2 Sobic.002G315000 - -
3 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
4 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
5 Sobic.002G064400 expressed protein -
6 Sobic.005G204100 kelch repeat protein, putative, expressed -
7 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
8 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
9 Sobic.001G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
10 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
11 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
12 Sobic.009G154100 expressed protein -
13 Sobic.001G356400 expansin precursor, putative, expressed -
14 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
15 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
16 Sobic.003G299700 TCP4(PubMedID : 24676859)@CIN-like (ClassII) Subclade 16 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@slTCP3, putative, expressed -
17 Sobic.010G135300 expressed protein -
18 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
19 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
20 Sobic.010G190400 ZOS6-05 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G482300 Sobic001G482300 Sobic003G096300 Sobic003G096300 Sobic001G482300--Sobic003G096300 Sobic002G315000 Sobic002G315000 Sobic001G482300--Sobic002G315000 Sobic003G420800 Sobic003G420800 Sobic001G482300--Sobic003G420800 Sobic001G047200 Sobic001G047200 Sobic001G482300--Sobic001G047200 Sobic002G064400 Sobic002G064400 Sobic001G482300--Sobic002G064400 Sobic005G204100 Sobic005G204100 Sobic001G482300--Sobic005G204100 Sobic009G083300 Sobic009G083300 Sobic001G482300--Sobic009G083300 Sobic008G038200 Sobic008G038200 Sobic001G482300--Sobic008G038200 Sobic001G370000 Sobic001G370000 Sobic001G482300--Sobic001G370000 Sobic003G096300--Sobic008G038200 Sobic002G098500 Sobic002G098500 Sobic003G096300--Sobic002G098500 Sobic003G096300--Sobic001G482300 Sobic002G216600 Sobic002G216600 Sobic003G096300--Sobic002G216600 Sobic007G065300 Sobic007G065300 Sobic003G096300--Sobic007G065300 Sobic003G096300--Sobic005G204100 Sobic003G096300--Sobic001G047200 Sobic001G384700 Sobic001G384700 Sobic003G096300--Sobic001G384700 Sobic001G434100 Sobic001G434100 Sobic003G096300--Sobic001G434100 Sobic009G154100 Sobic009G154100 Sobic002G315000--Sobic009G154100 Sobic003G333000 Sobic003G333000 Sobic002G315000--Sobic003G333000 Sobic002G315000--Sobic003G420800 Sobic001G221900 Sobic001G221900 Sobic002G315000--Sobic001G221900 Sobic001G228100 Sobic001G228100 Sobic002G315000--Sobic001G228100 Sobic005G227050 Sobic005G227050 Sobic002G315000--Sobic005G227050 Sobic002G072700 Sobic002G072700 Sobic002G315000--Sobic002G072700 Sobic002G315000--Sobic001G482300 Sobic002G179700 Sobic002G179700 Sobic002G315000--Sobic002G179700 Sobic007G210900 Sobic007G210900 Sobic003G420800--Sobic007G210900 Sobic003G420800--Sobic002G315000 Sobic003G420800--Sobic005G204100 Sobic003G420800--Sobic009G154100 Sobic003G420800--Sobic002G179700 Sobic003G420800--Sobic003G333000 Sobic003G174900 Sobic003G174900 Sobic003G420800--Sobic003G174900 Sobic003G420800--Sobic001G482300 Sobic003G420800--Sobic001G047200 Sobic002G311000 Sobic002G311000 Sobic001G047200--Sobic002G311000 Sobic002G142500 Sobic002G142500 Sobic001G047200--Sobic002G142500 Sobic010G135300 Sobic010G135300 Sobic001G047200--Sobic010G135300 Sobic002G377300 Sobic002G377300 Sobic001G047200--Sobic002G377300 Sobic001G047200--Sobic003G096300 Sobic001G047200--Sobic001G482300 Sobic001G047200--Sobic003G420800 Sobic001G157100 Sobic001G157100 Sobic001G047200--Sobic001G157100 Sobic009G148200 Sobic009G148200 Sobic001G047200--Sobic009G148200 Sobic008G008500 Sobic008G008500 Sobic002G064400--Sobic008G008500 Sobic002G190100 Sobic002G190100 Sobic002G064400--Sobic002G190100 Sobic001G215300 Sobic001G215300 Sobic002G064400--Sobic001G215300 Sobic001G236800 Sobic001G236800 Sobic002G064400--Sobic001G236800 Sobic002G064400--Sobic009G083300 Sobic007G206100 Sobic007G206100 Sobic002G064400--Sobic007G206100 Sobic002G242600 Sobic002G242600 Sobic002G064400--Sobic002G242600 Sobic001G142400 Sobic001G142400 Sobic002G064400--Sobic001G142400 Sobic004G015700 Sobic004G015700 Sobic002G064400--Sobic004G015700 Sobic005G204100--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic007G142900 Sobic007G142900 Sobic005G204100--Sobic007G142900 Sobic005G204100--Sobic002G098500 Sobic005G204100--Sobic001G221900 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400 Sobic003G069200 Sobic003G069200 Sobic009G083300--Sobic003G069200 Sobic009G083300--Sobic008G008500 Sobic006G155700 Sobic006G155700 Sobic009G083300--Sobic006G155700 Sobic009G083300--Sobic004G015700 Sobic009G083300--Sobic002G064400 Sobic005G084000 Sobic005G084000 Sobic009G083300--Sobic005G084000 Sobic003G071600 Sobic003G071600 Sobic009G083300--Sobic003G071600 Sobic009G083300--Sobic001G142400 Sobic001G099000 Sobic001G099000 Sobic009G083300--Sobic001G099000 Sobic008G038200--Sobic007G065300 Sobic008G038200--Sobic002G098500 Sobic001G298800 Sobic001G298800 Sobic008G038200--Sobic001G298800 Sobic008G038200--Sobic003G096300 Sobic001G518000 Sobic001G518000 Sobic008G038200--Sobic001G518000 Sobic006G241800 Sobic006G241800 Sobic008G038200--Sobic006G241800 Sobic003G177000 Sobic003G177000 Sobic008G038200--Sobic003G177000 Sobic008G038200--Sobic010G135300 Sobic007G128100 Sobic007G128100 Sobic008G038200--Sobic007G128100 Sobic001G370000--Sobic003G420800 Sobic001G370000--Sobic001G482300 Sobic010G246700 Sobic010G246700 Sobic001G370000--Sobic010G246700 Sobic001G356400 Sobic001G356400 Sobic001G370000--Sobic001G356400 Sobic001G370000--Sobic009G154100 Sobic001G370000--Sobic001G221900 Sobic001G370000--Sobic002G315000 Sobic009G235700 Sobic009G235700 Sobic001G370000--Sobic009G235700 Sobic005G209900 Sobic005G209900 Sobic001G370000--Sobic005G209900
Octagon: transcription factors


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