Gene annotation
Transcriptome id Sobic.010G190400.1
Synonym WIP2, Sb10g024040, NTT
Functional annotation ZOS6-05 - C2H2 zinc finger protein, expressed
UniProt C5Z5T1
Pfam -
Panther DB PTHR10593 PTHR10593:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57670 : C2H2-type zinc finger family protein
RAP-DB (Rice) LOC_Os06g40960.1 : ZOS6-05 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a037244 , Zm00025a046409 , Zm00025a033793 , Zm00025a051571 , Zm00025a043815 , Zm00025a026771 , Zm00025a013702 , Zm00025a047434 , Zm00025a005046 , Zm00025a042128
Brachypodium KQK10684 , KQK17682 , KQJ89685 , KQK06003 , KQJ90731 , KQJ89791 , KQJ98896
Barley -
Wheat TraesCS5A02G179800 , TraesCS1A02G276800 , TraesCS5B02G177600 , TraesCS7B02G304000 , TraesCS7D02G242600 , TraesCS5D02G179700 , TraesCS3D02G364800 , TraesCS3B02G404000 , TraesCS5A02G263200 , TraesCS1D02G276200 , TraesCS5D02G270700 , TraesCS5D02G184400 , TraesCS5A02G175400 , TraesCS3A02G371700 , TraesCS7A02G404400 , TraesCS5B02G262400 , TraesCS7D02G397800 , TraesCS1B02G285900 , TraesCS7B02G147400
Populus PNT52212


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393401 - -
2 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
3 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
4 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
5 Sobic.009G173200 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
6 Sobic.009G141700 expressed protein -
7 Sobic.006G046600 expressed protein -
8 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
9 Sobic.005G204100 kelch repeat protein, putative, expressed -
10 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
11 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
12 Sobic.002G060450 - -
13 Sobic.006G006500 MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
14 Sobic.004G052800 DUF640 domain containing protein, putative, expressed -
15 Sobic.003G023400 SCAR-like protein 2, putative, expressed -
16 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
17 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
18 Sobic.001G120900 photoperiodic flowering time gene(PubMedID : 22394582)@-(PubMedID : 23108465)@GRAS family transcription factor domain containing protein, expressed K14494: DELLA protein
19 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
20 Sobic.010G276600 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C


Gene co-expression network
sample Sobic010G190400 Sobic010G190400 Sobic001G393401 Sobic001G393401 Sobic010G190400--Sobic001G393401 Sobic008G038200 Sobic008G038200 Sobic010G190400--Sobic008G038200 Sobic007G065300 Sobic007G065300 Sobic010G190400--Sobic007G065300 Sobic001G384700 Sobic001G384700 Sobic010G190400--Sobic001G384700 Sobic009G173200 Sobic009G173200 Sobic010G190400--Sobic009G173200 Sobic009G141700 Sobic009G141700 Sobic010G190400--Sobic009G141700 Sobic006G046600 Sobic006G046600 Sobic010G190400--Sobic006G046600 Sobic001G482300 Sobic001G482300 Sobic010G190400--Sobic001G482300 Sobic005G204100 Sobic005G204100 Sobic010G190400--Sobic005G204100 Sobic003G023400 Sobic003G023400 Sobic001G393401--Sobic003G023400 Sobic001G393401--Sobic001G384700 Sobic002G216600 Sobic002G216600 Sobic001G393401--Sobic002G216600 Sobic002G060450 Sobic002G060450 Sobic001G393401--Sobic002G060450 Sobic001G393401--Sobic010G190400 Sobic001G393401--Sobic005G204100 Sobic001G184400 Sobic001G184400 Sobic001G393401--Sobic001G184400 Sobic002G049000 Sobic002G049000 Sobic001G393401--Sobic002G049000 Sobic004G052800 Sobic004G052800 Sobic001G393401--Sobic004G052800 Sobic008G038200--Sobic007G065300 Sobic002G098500 Sobic002G098500 Sobic008G038200--Sobic002G098500 Sobic001G298800 Sobic001G298800 Sobic008G038200--Sobic001G298800 Sobic003G096300 Sobic003G096300 Sobic008G038200--Sobic003G096300 Sobic001G518000 Sobic001G518000 Sobic008G038200--Sobic001G518000 Sobic006G241800 Sobic006G241800 Sobic008G038200--Sobic006G241800 Sobic003G177000 Sobic003G177000 Sobic008G038200--Sobic003G177000 Sobic010G135300 Sobic010G135300 Sobic008G038200--Sobic010G135300 Sobic007G128100 Sobic007G128100 Sobic008G038200--Sobic007G128100 Sobic007G065300--Sobic008G038200 Sobic007G032100 Sobic007G032100 Sobic007G065300--Sobic007G032100 Sobic007G165800 Sobic007G165800 Sobic007G065300--Sobic007G165800 Sobic007G065300--Sobic002G098500 Sobic001G434100 Sobic001G434100 Sobic007G065300--Sobic001G434100 Sobic010G020600 Sobic010G020600 Sobic007G065300--Sobic010G020600 Sobic001G221900 Sobic001G221900 Sobic007G065300--Sobic001G221900 Sobic009G235700 Sobic009G235700 Sobic007G065300--Sobic009G235700 Sobic007G065300--Sobic001G298800 Sobic001G384700--Sobic002G216600 Sobic001G079900 Sobic001G079900 Sobic001G384700--Sobic001G079900 Sobic001G384700--Sobic009G141700 Sobic001G384700--Sobic006G046600 Sobic001G384700--Sobic005G204100 Sobic001G384700--Sobic004G052800 Sobic005G168400 Sobic005G168400 Sobic001G384700--Sobic005G168400 Sobic001G379900 Sobic001G379900 Sobic001G384700--Sobic001G379900 Sobic001G384700--Sobic001G434100 Sobic003G045700 Sobic003G045700 Sobic009G173200--Sobic003G045700 Sobic001G207600 Sobic001G207600 Sobic009G173200--Sobic001G207600 Sobic009G172700 Sobic009G172700 Sobic009G173200--Sobic009G172700 Sobic010G231600 Sobic010G231600 Sobic009G173200--Sobic010G231600 Sobic009G173200--Sobic001G379900 Sobic003G302000 Sobic003G302000 Sobic009G173200--Sobic003G302000 Sobic006G014400 Sobic006G014400 Sobic009G173200--Sobic006G014400 Sobic009G173200--Sobic007G165800 Sobic009G173200--Sobic001G518000 Sobic009G141700--Sobic001G079900 Sobic009G141700--Sobic001G384700 Sobic009G141700--Sobic002G216600 Sobic008G169400 Sobic008G169400 Sobic009G141700--Sobic008G169400 Sobic003G323300 Sobic003G323300 Sobic009G141700--Sobic003G323300 Sobic009G141700--Sobic006G046600 Sobic005G062600 Sobic005G062600 Sobic009G141700--Sobic005G062600 Sobic006G067700 Sobic006G067700 Sobic009G141700--Sobic006G067700 Sobic006G022400 Sobic006G022400 Sobic009G141700--Sobic006G022400 Sobic001G494100 Sobic001G494100 Sobic006G046600--Sobic001G494100 Sobic006G046600--Sobic001G384700 Sobic006G046600--Sobic009G141700 Sobic010G173700 Sobic010G173700 Sobic006G046600--Sobic010G173700 Sobic006G046600--Sobic002G216600 Sobic006G046600--Sobic008G169400 Sobic006G046600--Sobic001G079900 Sobic008G044600 Sobic008G044600 Sobic006G046600--Sobic008G044600 Sobic003G277900 Sobic003G277900 Sobic006G046600--Sobic003G277900 Sobic001G482300--Sobic003G096300 Sobic002G315000 Sobic002G315000 Sobic001G482300--Sobic002G315000 Sobic003G420800 Sobic003G420800 Sobic001G482300--Sobic003G420800 Sobic001G047200 Sobic001G047200 Sobic001G482300--Sobic001G047200 Sobic002G064400 Sobic002G064400 Sobic001G482300--Sobic002G064400 Sobic001G482300--Sobic005G204100 Sobic009G083300 Sobic009G083300 Sobic001G482300--Sobic009G083300 Sobic001G482300--Sobic008G038200 Sobic001G370000 Sobic001G370000 Sobic001G482300--Sobic001G370000 Sobic005G204100--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic005G204100--Sobic009G259500 Sobic002G072700 Sobic002G072700 Sobic005G204100--Sobic002G072700 Sobic007G142900 Sobic007G142900 Sobic005G204100--Sobic007G142900 Sobic005G204100--Sobic002G098500 Sobic005G204100--Sobic001G221900 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400
Octagon: transcription factors


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