Gene annotation
Transcriptome id Sobic.006G046600.1,Sobic.006G046600.3,Sobic.006G046600.2
Synonym Sb06g011790
Functional annotation expressed protein
UniProt C5YEB0
Pfam -
Panther DB PTHR31071 PTHR31071:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11590 : -
RAP-DB (Rice) LOC_Os04g31400.1 : expressed protein
MaizeGDB (Corn) Zm00025a055872 , Zm00025a011801
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
2 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
3 Sobic.009G141700 expressed protein -
4 Sobic.010G173700 tetraspanin family protein, putative, expressed -
5 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
6 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
7 Sobic.001G079900 expressed protein -
8 Sobic.008G044600 expressed protein -
9 Sobic.003G277900 "D61(Ortholog in rice:Morinaka et al., 2006(PubMedID : 31659871)@systemin receptor SR160 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
10 Sobic.003G027800 protein kinase family protein, putative, expressed -
11 Sobic.005G204100 kelch repeat protein, putative, expressed -
12 Sobic.003G006900 microtubule associated protein, putative, expressed -
13 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
14 Sobic.010G026100 expressed protein -
15 Sobic.007G023100 CCT motif family protein, expressed -
16 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
17 Sobic.002G071850 - -
18 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
19 Sobic.007G070200 tentative name(PubMedID : 31536532)@OsFBX265 - F-box domain containing protein, expressed -
20 Sobic.001G393401 - -


Gene co-expression network
sample Sobic006G046600 Sobic006G046600 Sobic001G494100 Sobic001G494100 Sobic006G046600--Sobic001G494100 Sobic001G384700 Sobic001G384700 Sobic006G046600--Sobic001G384700 Sobic009G141700 Sobic009G141700 Sobic006G046600--Sobic009G141700 Sobic010G173700 Sobic010G173700 Sobic006G046600--Sobic010G173700 Sobic002G216600 Sobic002G216600 Sobic006G046600--Sobic002G216600 Sobic008G169400 Sobic008G169400 Sobic006G046600--Sobic008G169400 Sobic001G079900 Sobic001G079900 Sobic006G046600--Sobic001G079900 Sobic008G044600 Sobic008G044600 Sobic006G046600--Sobic008G044600 Sobic003G277900 Sobic003G277900 Sobic006G046600--Sobic003G277900 Sobic001G494100--Sobic006G046600 Sobic001G494100--Sobic008G169400 Sobic005G204100 Sobic005G204100 Sobic001G494100--Sobic005G204100 Sobic004G227500 Sobic004G227500 Sobic001G494100--Sobic004G227500 Sobic001G494100--Sobic003G277900 Sobic006G262100 Sobic006G262100 Sobic001G494100--Sobic006G262100 Sobic001G494100--Sobic002G216600 Sobic004G199700 Sobic004G199700 Sobic001G494100--Sobic004G199700 Sobic001G315400 Sobic001G315400 Sobic001G494100--Sobic001G315400 Sobic001G384700--Sobic002G216600 Sobic001G384700--Sobic001G079900 Sobic001G384700--Sobic009G141700 Sobic001G384700--Sobic006G046600 Sobic001G384700--Sobic005G204100 Sobic004G052800 Sobic004G052800 Sobic001G384700--Sobic004G052800 Sobic005G168400 Sobic005G168400 Sobic001G384700--Sobic005G168400 Sobic001G379900 Sobic001G379900 Sobic001G384700--Sobic001G379900 Sobic001G434100 Sobic001G434100 Sobic001G384700--Sobic001G434100 Sobic009G141700--Sobic001G079900 Sobic009G141700--Sobic001G384700 Sobic009G141700--Sobic002G216600 Sobic009G141700--Sobic008G169400 Sobic003G323300 Sobic003G323300 Sobic009G141700--Sobic003G323300 Sobic009G141700--Sobic006G046600 Sobic005G062600 Sobic005G062600 Sobic009G141700--Sobic005G062600 Sobic006G067700 Sobic006G067700 Sobic009G141700--Sobic006G067700 Sobic006G022400 Sobic006G022400 Sobic009G141700--Sobic006G022400 Sobic003G406600 Sobic003G406600 Sobic010G173700--Sobic003G406600 Sobic010G173700--Sobic006G046600 Sobic005G032600 Sobic005G032600 Sobic010G173700--Sobic005G032600 Sobic010G173700--Sobic001G079900 Sobic004G359500 Sobic004G359500 Sobic010G173700--Sobic004G359500 Sobic010G173700--Sobic001G384700 Sobic010G173700--Sobic006G022400 Sobic006G185800 Sobic006G185800 Sobic010G173700--Sobic006G185800 Sobic001G113800 Sobic001G113800 Sobic010G173700--Sobic001G113800 Sobic002G216600--Sobic005G204100 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic009G259500 Sobic009G259500 Sobic002G216600--Sobic009G259500 Sobic002G216600--Sobic004G199700 Sobic002G216600--Sobic001G079900 Sobic002G216600--Sobic009G141700 Sobic003G174900 Sobic003G174900 Sobic002G216600--Sobic003G174900 Sobic002G348700 Sobic002G348700 Sobic002G216600--Sobic002G348700 Sobic008G169400--Sobic001G079900 Sobic003G153900 Sobic003G153900 Sobic008G169400--Sobic003G153900 Sobic007G031300 Sobic007G031300 Sobic008G169400--Sobic007G031300 Sobic008G169400--Sobic009G141700 Sobic002G370400 Sobic002G370400 Sobic008G169400--Sobic002G370400 Sobic008G169400--Sobic001G494100 Sobic002G293700 Sobic002G293700 Sobic008G169400--Sobic002G293700 Sobic009G158900 Sobic009G158900 Sobic008G169400--Sobic009G158900 Sobic003G397100 Sobic003G397100 Sobic008G169400--Sobic003G397100 Sobic001G079900--Sobic005G032600 Sobic001G079900--Sobic001G384700 Sobic001G079900--Sobic005G062600 Sobic002G050700 Sobic002G050700 Sobic001G079900--Sobic002G050700 Sobic003G351900 Sobic003G351900 Sobic001G079900--Sobic003G351900 Sobic001G493900 Sobic001G493900 Sobic001G079900--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic001G079900--Sobic008G151600 Sobic002G027600 Sobic002G027600 Sobic001G079900--Sobic002G027600 Sobic001G079900--Sobic009G141700 Sobic008G044600--Sobic006G022400 Sobic004G207000 Sobic004G207000 Sobic008G044600--Sobic004G207000 Sobic006G203400 Sobic006G203400 Sobic008G044600--Sobic006G203400 Sobic003G131100 Sobic003G131100 Sobic008G044600--Sobic003G131100 Sobic007G023100 Sobic007G023100 Sobic008G044600--Sobic007G023100 Sobic008G044600--Sobic006G046600 Sobic004G229100 Sobic004G229100 Sobic008G044600--Sobic004G229100 Sobic006G081500 Sobic006G081500 Sobic008G044600--Sobic006G081500 Sobic008G044600--Sobic001G494100 Sobic004G053300 Sobic004G053300 Sobic003G277900--Sobic004G053300 Sobic005G159600 Sobic005G159600 Sobic003G277900--Sobic005G159600 Sobic003G277900--Sobic001G494100 Sobic003G277900--Sobic006G046600 Sobic008G000800 Sobic008G000800 Sobic003G277900--Sobic008G000800 Sobic008G086200 Sobic008G086200 Sobic003G277900--Sobic008G086200 Sobic009G123500 Sobic009G123500 Sobic003G277900--Sobic009G123500 Sobic003G277900--Sobic001G315400 Sobic007G187400 Sobic007G187400 Sobic003G277900--Sobic007G187400
Octagon: transcription factors


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