Gene annotation
Transcriptome id Sobic.008G044600.1
Synonym Sb08g003830
Functional annotation expressed protein
UniProt A0A1B6PBE6
Pfam -
Panther DB PTHR33304 PTHR33304:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G43770 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os12g06440.1 : expressed protein
MaizeGDB (Corn) Zm00025a053964 , Zm00025a053962
Brachypodium KQK03971
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
2 Sobic.004G207000 fasciated ear2, putative, expressed -
3 Sobic.006G203400 "GS2/GL2(Ortholog in rice:Che et al., 2015(PubMedID : 31659900)@growth-regulating factor, putative, expressed -
4 Sobic.003G131100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
5 Sobic.007G023100 CCT motif family protein, expressed -
6 Sobic.006G046600 expressed protein -
7 Sobic.004G229100 OsFBX61 - F-box domain containing protein, expressed -
8 Sobic.006G081500 receptor-like kinase, putative, expressed -
9 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
10 Sobic.007G070200 tentative name(PubMedID : 31536532)@OsFBX265 - F-box domain containing protein, expressed -
11 Sobic.003G323300 expressed protein -
12 Sobic.009G141700 expressed protein -
13 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
14 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
15 Sobic.004G149400 ankyrin, putative, expressed -
16 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
17 Sobic.001G079900 expressed protein -
18 Sobic.010G173700 tetraspanin family protein, putative, expressed -
19 Sobic.005G177900 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
20 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G044600 Sobic008G044600 Sobic006G022400 Sobic006G022400 Sobic008G044600--Sobic006G022400 Sobic004G207000 Sobic004G207000 Sobic008G044600--Sobic004G207000 Sobic006G203400 Sobic006G203400 Sobic008G044600--Sobic006G203400 Sobic003G131100 Sobic003G131100 Sobic008G044600--Sobic003G131100 Sobic007G023100 Sobic007G023100 Sobic008G044600--Sobic007G023100 Sobic006G046600 Sobic006G046600 Sobic008G044600--Sobic006G046600 Sobic004G229100 Sobic004G229100 Sobic008G044600--Sobic004G229100 Sobic006G081500 Sobic006G081500 Sobic008G044600--Sobic006G081500 Sobic001G494100 Sobic001G494100 Sobic008G044600--Sobic001G494100 Sobic006G022400--Sobic004G207000 Sobic001G079900 Sobic001G079900 Sobic006G022400--Sobic001G079900 Sobic009G216500 Sobic009G216500 Sobic006G022400--Sobic009G216500 Sobic005G177900 Sobic005G177900 Sobic006G022400--Sobic005G177900 Sobic001G395200 Sobic001G395200 Sobic006G022400--Sobic001G395200 Sobic003G351900 Sobic003G351900 Sobic006G022400--Sobic003G351900 Sobic006G022500 Sobic006G022500 Sobic006G022400--Sobic006G022500 Sobic008G169400 Sobic008G169400 Sobic006G022400--Sobic008G169400 Sobic005G032600 Sobic005G032600 Sobic006G022400--Sobic005G032600 Sobic004G207000--Sobic006G022400 Sobic001G540700 Sobic001G540700 Sobic004G207000--Sobic001G540700 Sobic007G125700 Sobic007G125700 Sobic004G207000--Sobic007G125700 Sobic009G006900 Sobic009G006900 Sobic004G207000--Sobic009G006900 Sobic002G302600 Sobic002G302600 Sobic004G207000--Sobic002G302600 Sobic004G149400 Sobic004G149400 Sobic004G207000--Sobic004G149400 Sobic004G207000--Sobic005G032600 Sobic010G149600 Sobic010G149600 Sobic004G207000--Sobic010G149600 Sobic009G031500 Sobic009G031500 Sobic004G207000--Sobic009G031500 Sobic006G203400--Sobic008G044600 Sobic006G203400--Sobic006G022400 Sobic010G013500 Sobic010G013500 Sobic006G203400--Sobic010G013500 Sobic006G203400--Sobic006G022500 Sobic004G132100 Sobic004G132100 Sobic006G203400--Sobic004G132100 Sobic002G427800 Sobic002G427800 Sobic006G203400--Sobic002G427800 Sobic002G105000 Sobic002G105000 Sobic006G203400--Sobic002G105000 Sobic007G046900 Sobic007G046900 Sobic006G203400--Sobic007G046900 Sobic009G239301 Sobic009G239301 Sobic006G203400--Sobic009G239301 Sobic003G283600 Sobic003G283600 Sobic003G131100--Sobic003G283600 Sobic003G131100--Sobic008G044600 Sobic001G369800 Sobic001G369800 Sobic003G131100--Sobic001G369800 Sobic003G131100--Sobic010G149600 Sobic003G131100--Sobic005G032600 Sobic002G074000 Sobic002G074000 Sobic003G131100--Sobic002G074000 Sobic003G131100--Sobic004G207000 Sobic003G131100--Sobic008G169400 Sobic003G131100--Sobic001G079900 Sobic003G090600 Sobic003G090600 Sobic007G023100--Sobic003G090600 Sobic007G147200 Sobic007G147200 Sobic007G023100--Sobic007G147200 Sobic002G430700 Sobic002G430700 Sobic007G023100--Sobic002G430700 Sobic006G107500 Sobic006G107500 Sobic007G023100--Sobic006G107500 Sobic005G062600 Sobic005G062600 Sobic007G023100--Sobic005G062600 Sobic007G033700 Sobic007G033700 Sobic007G023100--Sobic007G033700 Sobic003G019900 Sobic003G019900 Sobic007G023100--Sobic003G019900 Sobic007G128100 Sobic007G128100 Sobic007G023100--Sobic007G128100 Sobic006G163300 Sobic006G163300 Sobic007G023100--Sobic006G163300 Sobic006G046600--Sobic001G494100 Sobic001G384700 Sobic001G384700 Sobic006G046600--Sobic001G384700 Sobic009G141700 Sobic009G141700 Sobic006G046600--Sobic009G141700 Sobic010G173700 Sobic010G173700 Sobic006G046600--Sobic010G173700 Sobic002G216600 Sobic002G216600 Sobic006G046600--Sobic002G216600 Sobic006G046600--Sobic008G169400 Sobic006G046600--Sobic001G079900 Sobic006G046600--Sobic008G044600 Sobic003G277900 Sobic003G277900 Sobic006G046600--Sobic003G277900 Sobic001G217100 Sobic001G217100 Sobic004G229100--Sobic001G217100 Sobic004G078100 Sobic004G078100 Sobic004G229100--Sobic004G078100 Sobic009G192500 Sobic009G192500 Sobic004G229100--Sobic009G192500 Sobic003G132700 Sobic003G132700 Sobic004G229100--Sobic003G132700 Sobic004G229100--Sobic007G046900 Sobic009G164900 Sobic009G164900 Sobic004G229100--Sobic009G164900 Sobic002G089900 Sobic002G089900 Sobic004G229100--Sobic002G089900 Sobic009G018000 Sobic009G018000 Sobic004G229100--Sobic009G018000 Sobic002G095700 Sobic002G095700 Sobic004G229100--Sobic002G095700 Sobic001G372900 Sobic001G372900 Sobic006G081500--Sobic001G372900 Sobic001G296100 Sobic001G296100 Sobic006G081500--Sobic001G296100 Sobic001G499200 Sobic001G499200 Sobic006G081500--Sobic001G499200 Sobic006G081500--Sobic003G351900 Sobic006G081500--Sobic001G540700 Sobic006G081500--Sobic003G283600 Sobic006G081500--Sobic006G022400 Sobic006G142500 Sobic006G142500 Sobic006G081500--Sobic006G142500 Sobic003G153900 Sobic003G153900 Sobic006G081500--Sobic003G153900 Sobic001G494100--Sobic006G046600 Sobic001G494100--Sobic008G169400 Sobic005G204100 Sobic005G204100 Sobic001G494100--Sobic005G204100 Sobic004G227500 Sobic004G227500 Sobic001G494100--Sobic004G227500 Sobic001G494100--Sobic003G277900 Sobic006G262100 Sobic006G262100 Sobic001G494100--Sobic006G262100 Sobic001G494100--Sobic002G216600 Sobic004G199700 Sobic004G199700 Sobic001G494100--Sobic004G199700 Sobic001G315400 Sobic001G315400 Sobic001G494100--Sobic001G315400
Octagon: transcription factors


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