Gene annotation
Transcriptome id Sobic.010G173700.1
Synonym TET2, Sb10g022610
Functional annotation tetraspanin family protein, putative, expressed
UniProt C5Z533
Pfam PF00335
Panther DB PTHR32191 PTHR32191:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G19580 : tetraspanin2
RAP-DB (Rice) LOC_Os06g37510.1 : tetraspanin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a042297
Brachypodium KQJ94050 , KQK17897
Barley HORVU7Hr1G086670.4 , HORVU7Hr1G086670.5 , HORVU7Hr1G086670.6 , HORVU7Hr1G086670.7 , HORVU7Hr1G086670.2 , HORVU7Hr1G086670.3 , HORVU6Hr1G039610.1 , HORVU6Hr1G039610.3 , HORVU6Hr1G039610.4 , HORVU6Hr1G039610.2
Wheat TraesCS6D02G172600 , TraesCS6B02G214400 , TraesCS7D02G359600 , TraesCS7B02G264300 , TraesCS6A02G185600 , TraesCS6B02G214300 , TraesCS6B02G214500
Populus -


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cDNA sequences
Sobic.010G173700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G406600 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659873)@OsSPL2 - SBP-box gene family member, expressed -
2 Sobic.006G046600 expressed protein -
3 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
4 Sobic.001G079900 expressed protein -
5 Sobic.004G359500 expressed protein -
6 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
7 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
8 Sobic.006G185800 OsSub45 - Putative Subtilisin homologue, expressed -
9 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
10 Sobic.009G141700 expressed protein -
11 Sobic.004G207000 fasciated ear2, putative, expressed -
12 Sobic.005G204100 kelch repeat protein, putative, expressed -
13 Sobic.003G302000 expressed protein -
14 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
15 Sobic.003G230000 serine/threonine-protein kinase, putative, expressed -
16 Sobic.007G023100 CCT motif family protein, expressed -
17 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
18 Sobic.004G052800 DUF640 domain containing protein, putative, expressed -
19 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.003G027800 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic010G173700 Sobic010G173700 Sobic003G406600 Sobic003G406600 Sobic010G173700--Sobic003G406600 Sobic006G046600 Sobic006G046600 Sobic010G173700--Sobic006G046600 Sobic005G032600 Sobic005G032600 Sobic010G173700--Sobic005G032600 Sobic001G079900 Sobic001G079900 Sobic010G173700--Sobic001G079900 Sobic004G359500 Sobic004G359500 Sobic010G173700--Sobic004G359500 Sobic001G384700 Sobic001G384700 Sobic010G173700--Sobic001G384700 Sobic006G022400 Sobic006G022400 Sobic010G173700--Sobic006G022400 Sobic006G185800 Sobic006G185800 Sobic010G173700--Sobic006G185800 Sobic001G113800 Sobic001G113800 Sobic010G173700--Sobic001G113800 Sobic003G406600--Sobic010G173700 Sobic001G116600 Sobic001G116600 Sobic003G406600--Sobic001G116600 Sobic007G023100 Sobic007G023100 Sobic003G406600--Sobic007G023100 Sobic003G356600 Sobic003G356600 Sobic003G406600--Sobic003G356600 Sobic007G070200 Sobic007G070200 Sobic003G406600--Sobic007G070200 Sobic001G467200 Sobic001G467200 Sobic003G406600--Sobic001G467200 Sobic003G406600--Sobic006G046600 Sobic010G029000 Sobic010G029000 Sobic003G406600--Sobic010G029000 Sobic003G230000 Sobic003G230000 Sobic003G406600--Sobic003G230000 Sobic001G494100 Sobic001G494100 Sobic006G046600--Sobic001G494100 Sobic006G046600--Sobic001G384700 Sobic009G141700 Sobic009G141700 Sobic006G046600--Sobic009G141700 Sobic006G046600--Sobic010G173700 Sobic002G216600 Sobic002G216600 Sobic006G046600--Sobic002G216600 Sobic008G169400 Sobic008G169400 Sobic006G046600--Sobic008G169400 Sobic006G046600--Sobic001G079900 Sobic008G044600 Sobic008G044600 Sobic006G046600--Sobic008G044600 Sobic003G277900 Sobic003G277900 Sobic006G046600--Sobic003G277900 Sobic002G027600 Sobic002G027600 Sobic005G032600--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic005G032600--Sobic004G267600 Sobic005G032600--Sobic001G079900 Sobic003G019900 Sobic003G019900 Sobic005G032600--Sobic003G019900 Sobic006G272800 Sobic006G272800 Sobic005G032600--Sobic006G272800 Sobic001G493900 Sobic001G493900 Sobic005G032600--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic005G032600--Sobic008G151600 Sobic003G351900 Sobic003G351900 Sobic005G032600--Sobic003G351900 Sobic007G032100 Sobic007G032100 Sobic005G032600--Sobic007G032100 Sobic001G079900--Sobic005G032600 Sobic001G079900--Sobic001G384700 Sobic005G062600 Sobic005G062600 Sobic001G079900--Sobic005G062600 Sobic002G050700 Sobic002G050700 Sobic001G079900--Sobic002G050700 Sobic001G079900--Sobic003G351900 Sobic001G079900--Sobic001G493900 Sobic001G079900--Sobic008G151600 Sobic001G079900--Sobic002G027600 Sobic001G079900--Sobic009G141700 Sobic006G058000 Sobic006G058000 Sobic004G359500--Sobic006G058000 Sobic007G160300 Sobic007G160300 Sobic004G359500--Sobic007G160300 Sobic004G359500--Sobic010G173700 Sobic003G070600 Sobic003G070600 Sobic004G359500--Sobic003G070600 Sobic001G470200 Sobic001G470200 Sobic004G359500--Sobic001G470200 Sobic001G390400 Sobic001G390400 Sobic004G359500--Sobic001G390400 Sobic004G359500--Sobic005G032600 Sobic008G097700 Sobic008G097700 Sobic004G359500--Sobic008G097700 Sobic001G473500 Sobic001G473500 Sobic004G359500--Sobic001G473500 Sobic001G384700--Sobic002G216600 Sobic001G384700--Sobic001G079900 Sobic001G384700--Sobic009G141700 Sobic001G384700--Sobic006G046600 Sobic005G204100 Sobic005G204100 Sobic001G384700--Sobic005G204100 Sobic004G052800 Sobic004G052800 Sobic001G384700--Sobic004G052800 Sobic005G168400 Sobic005G168400 Sobic001G384700--Sobic005G168400 Sobic001G379900 Sobic001G379900 Sobic001G384700--Sobic001G379900 Sobic001G434100 Sobic001G434100 Sobic001G384700--Sobic001G434100 Sobic004G207000 Sobic004G207000 Sobic006G022400--Sobic004G207000 Sobic006G022400--Sobic001G079900 Sobic009G216500 Sobic009G216500 Sobic006G022400--Sobic009G216500 Sobic005G177900 Sobic005G177900 Sobic006G022400--Sobic005G177900 Sobic001G395200 Sobic001G395200 Sobic006G022400--Sobic001G395200 Sobic006G022400--Sobic003G351900 Sobic006G022500 Sobic006G022500 Sobic006G022400--Sobic006G022500 Sobic006G022400--Sobic008G169400 Sobic006G022400--Sobic005G032600 Sobic006G185800--Sobic005G204100 Sobic001G074000 Sobic001G074000 Sobic006G185800--Sobic001G074000 Sobic006G185800--Sobic010G173700 Sobic009G129700 Sobic009G129700 Sobic006G185800--Sobic009G129700 Sobic006G185800--Sobic003G070600 Sobic001G221900 Sobic001G221900 Sobic006G185800--Sobic001G221900 Sobic006G185800--Sobic003G019900 Sobic009G235700 Sobic009G235700 Sobic006G185800--Sobic009G235700 Sobic010G020600 Sobic010G020600 Sobic006G185800--Sobic010G020600 Sobic001G487200 Sobic001G487200 Sobic001G113800--Sobic001G487200 Sobic003G360700 Sobic003G360700 Sobic001G113800--Sobic003G360700 Sobic001G231200 Sobic001G231200 Sobic001G113800--Sobic001G231200 Sobic001G113800--Sobic003G230000 Sobic010G135300 Sobic010G135300 Sobic001G113800--Sobic010G135300 Sobic002G370400 Sobic002G370400 Sobic001G113800--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic001G113800--Sobic002G002100 Sobic001G113800--Sobic001G074000 Sobic006G272500 Sobic006G272500 Sobic001G113800--Sobic006G272500
Octagon: transcription factors


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