Gene annotation
Transcriptome id Sobic.004G359500.1
Synonym Sb04g038630
Functional annotation expressed protein
UniProt C5XWU3
Pfam -
Panther DB PTHR34537 PTHR34537:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02180 : ferredoxin-related
RAP-DB (Rice) LOC_Os02g58740.1 : expressed protein
MaizeGDB (Corn) Zm00025a022714
Brachypodium KQK02194
Barley HORVU6Hr1G094010.2 , HORVU6Hr1G094010.3 , HORVU6Hr1G094010.1
Wheat TraesCS1D02G325100 , TraesCS1A02G323800 , TraesCS1B02G337100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G058000 OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
2 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
3 Sobic.010G173700 tetraspanin family protein, putative, expressed -
4 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
5 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
6 Sobic.001G390400 expressed protein -
7 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
8 Sobic.008G097700 transmembrane amino acid transporter protein, putative, expressed -
9 Sobic.001G473500 domain of unknown function DUF966 domain containing protein, expressed -
10 Sobic.007G163400 protein Kinase-like protein TMKL1 precursor, putative, expressed -
11 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
12 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
13 Sobic.003G100700 serine/threonine-protein kinase, putative, expressed -
14 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
16 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
17 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
18 Sobic.002G071850 - -
19 Sobic.001G493900 beta-galactosidase, putative, expressed -
20 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -


Gene co-expression network
sample Sobic004G359500 Sobic004G359500 Sobic006G058000 Sobic006G058000 Sobic004G359500--Sobic006G058000 Sobic007G160300 Sobic007G160300 Sobic004G359500--Sobic007G160300 Sobic010G173700 Sobic010G173700 Sobic004G359500--Sobic010G173700 Sobic003G070600 Sobic003G070600 Sobic004G359500--Sobic003G070600 Sobic001G470200 Sobic001G470200 Sobic004G359500--Sobic001G470200 Sobic001G390400 Sobic001G390400 Sobic004G359500--Sobic001G390400 Sobic005G032600 Sobic005G032600 Sobic004G359500--Sobic005G032600 Sobic008G097700 Sobic008G097700 Sobic004G359500--Sobic008G097700 Sobic001G473500 Sobic001G473500 Sobic004G359500--Sobic001G473500 Sobic006G058000--Sobic007G160300 Sobic010G020600 Sobic010G020600 Sobic006G058000--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic006G058000--Sobic010G078700 Sobic010G192500 Sobic010G192500 Sobic006G058000--Sobic010G192500 Sobic004G317200 Sobic004G317200 Sobic006G058000--Sobic004G317200 Sobic003G089300 Sobic003G089300 Sobic006G058000--Sobic003G089300 Sobic006G058000--Sobic001G390400 Sobic006G058000--Sobic001G470200 Sobic006G058000--Sobic008G097700 Sobic007G160300--Sobic003G089300 Sobic007G160300--Sobic003G070600 Sobic007G160300--Sobic006G058000 Sobic007G160300--Sobic010G020600 Sobic001G074000 Sobic001G074000 Sobic007G160300--Sobic001G074000 Sobic003G309400 Sobic003G309400 Sobic007G160300--Sobic003G309400 Sobic001G155700 Sobic001G155700 Sobic007G160300--Sobic001G155700 Sobic004G357000 Sobic004G357000 Sobic007G160300--Sobic004G357000 Sobic001G493900 Sobic001G493900 Sobic007G160300--Sobic001G493900 Sobic003G406600 Sobic003G406600 Sobic010G173700--Sobic003G406600 Sobic006G046600 Sobic006G046600 Sobic010G173700--Sobic006G046600 Sobic010G173700--Sobic005G032600 Sobic001G079900 Sobic001G079900 Sobic010G173700--Sobic001G079900 Sobic010G173700--Sobic004G359500 Sobic001G384700 Sobic001G384700 Sobic010G173700--Sobic001G384700 Sobic006G022400 Sobic006G022400 Sobic010G173700--Sobic006G022400 Sobic006G185800 Sobic006G185800 Sobic010G173700--Sobic006G185800 Sobic001G113800 Sobic001G113800 Sobic010G173700--Sobic001G113800 Sobic003G070600--Sobic001G074000 Sobic003G070600--Sobic010G020600 Sobic003G070600--Sobic007G160300 Sobic001G199400 Sobic001G199400 Sobic003G070600--Sobic001G199400 Sobic003G113500 Sobic003G113500 Sobic003G070600--Sobic003G113500 Sobic001G221900 Sobic001G221900 Sobic003G070600--Sobic001G221900 Sobic004G274600 Sobic004G274600 Sobic003G070600--Sobic004G274600 Sobic004G283800 Sobic004G283800 Sobic003G070600--Sobic004G283800 Sobic004G248100 Sobic004G248100 Sobic003G070600--Sobic004G248100 Sobic001G470200--Sobic004G357000 Sobic001G470200--Sobic004G317200 Sobic001G470200--Sobic010G020600 Sobic007G032100 Sobic007G032100 Sobic001G470200--Sobic007G032100 Sobic007G165800 Sobic007G165800 Sobic001G470200--Sobic007G165800 Sobic001G470200--Sobic004G274600 Sobic001G470200--Sobic003G089300 Sobic001G470200--Sobic008G097700 Sobic001G434100 Sobic001G434100 Sobic001G470200--Sobic001G434100 Sobic003G366000 Sobic003G366000 Sobic001G390400--Sobic003G366000 Sobic005G163400 Sobic005G163400 Sobic001G390400--Sobic005G163400 Sobic006G050900 Sobic006G050900 Sobic001G390400--Sobic006G050900 Sobic002G050700 Sobic002G050700 Sobic001G390400--Sobic002G050700 Sobic001G390400--Sobic010G192500 Sobic001G390400--Sobic004G317200 Sobic002G319300 Sobic002G319300 Sobic001G390400--Sobic002G319300 Sobic010G024500 Sobic010G024500 Sobic001G390400--Sobic010G024500 Sobic006G142500 Sobic006G142500 Sobic001G390400--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic005G032600--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic005G032600--Sobic004G267600 Sobic005G032600--Sobic001G079900 Sobic003G019900 Sobic003G019900 Sobic005G032600--Sobic003G019900 Sobic006G272800 Sobic006G272800 Sobic005G032600--Sobic006G272800 Sobic005G032600--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic005G032600--Sobic008G151600 Sobic003G351900 Sobic003G351900 Sobic005G032600--Sobic003G351900 Sobic005G032600--Sobic007G032100 Sobic008G097700--Sobic004G274600 Sobic008G097700--Sobic010G020600 Sobic008G097700--Sobic003G089300 Sobic004G211700 Sobic004G211700 Sobic008G097700--Sobic004G211700 Sobic008G097700--Sobic001G470200 Sobic002G032500 Sobic002G032500 Sobic008G097700--Sobic002G032500 Sobic008G097700--Sobic003G070600 Sobic008G097700--Sobic007G160300 Sobic003G300400 Sobic003G300400 Sobic008G097700--Sobic003G300400 Sobic001G286700 Sobic001G286700 Sobic001G473500--Sobic001G286700 Sobic001G473500--Sobic004G211700 Sobic002G363300 Sobic002G363300 Sobic001G473500--Sobic002G363300 Sobic010G235300 Sobic010G235300 Sobic001G473500--Sobic010G235300 Sobic001G046400 Sobic001G046400 Sobic001G473500--Sobic001G046400 Sobic009G208300 Sobic009G208300 Sobic001G473500--Sobic009G208300 Sobic001G473500--Sobic010G192500 Sobic009G060800 Sobic009G060800 Sobic001G473500--Sobic009G060800 Sobic009G146700 Sobic009G146700 Sobic001G473500--Sobic009G146700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.