Gene annotation
Transcriptome id Sobic.006G058000.1
Synonym SCPL45, Sb06g014580
Functional annotation OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5YF83
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF22
NCBI CDD -
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT1G28110 : serine carboxypeptidase-like 45
RAP-DB (Rice) LOC_Os04g32540.1 : OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a029806 , Zm00025a015672 , Zm00025a011679
Brachypodium PNT60962
Barley -
Wheat TraesCS2B02G304000 , TraesCS2D02G285600 , TraesCS2D02G285600 , TraesCS2A02G287100
Populus -


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cDNA sequences
Sobic.006G058000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
2 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
3 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
4 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
5 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
6 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
7 Sobic.001G390400 expressed protein -
8 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.008G097700 transmembrane amino acid transporter protein, putative, expressed -
10 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
11 Sobic.001G199400 monocopper oxidase, putative, expressed -
12 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
13 Sobic.010G023400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
14 Sobic.003G366000 DUF623 domain containing protein, expressed -
15 Sobic.004G302700 YABBY domain containing protein, putative, expressed -
16 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
17 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
18 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
19 Sobic.004G248100 endoglucanase, putative, expressed -
20 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic006G058000 Sobic006G058000 Sobic007G160300 Sobic007G160300 Sobic006G058000--Sobic007G160300 Sobic010G020600 Sobic010G020600 Sobic006G058000--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic006G058000--Sobic010G078700 Sobic010G192500 Sobic010G192500 Sobic006G058000--Sobic010G192500 Sobic004G317200 Sobic004G317200 Sobic006G058000--Sobic004G317200 Sobic003G089300 Sobic003G089300 Sobic006G058000--Sobic003G089300 Sobic001G390400 Sobic001G390400 Sobic006G058000--Sobic001G390400 Sobic001G470200 Sobic001G470200 Sobic006G058000--Sobic001G470200 Sobic008G097700 Sobic008G097700 Sobic006G058000--Sobic008G097700 Sobic007G160300--Sobic003G089300 Sobic003G070600 Sobic003G070600 Sobic007G160300--Sobic003G070600 Sobic007G160300--Sobic006G058000 Sobic007G160300--Sobic010G020600 Sobic001G074000 Sobic001G074000 Sobic007G160300--Sobic001G074000 Sobic003G309400 Sobic003G309400 Sobic007G160300--Sobic003G309400 Sobic001G155700 Sobic001G155700 Sobic007G160300--Sobic001G155700 Sobic004G357000 Sobic004G357000 Sobic007G160300--Sobic004G357000 Sobic001G493900 Sobic001G493900 Sobic007G160300--Sobic001G493900 Sobic010G020600--Sobic004G317200 Sobic004G248100 Sobic004G248100 Sobic010G020600--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic010G020600--Sobic003G339600 Sobic010G020600--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic010G020600--Sobic009G235700 Sobic010G020600--Sobic007G160300 Sobic003G018700 Sobic003G018700 Sobic010G020600--Sobic003G018700 Sobic010G020600--Sobic008G097700 Sobic001G221900 Sobic001G221900 Sobic010G020600--Sobic001G221900 Sobic003G113500 Sobic003G113500 Sobic010G078700--Sobic003G113500 Sobic001G199400 Sobic001G199400 Sobic010G078700--Sobic001G199400 Sobic007G165800 Sobic007G165800 Sobic010G078700--Sobic007G165800 Sobic010G078700--Sobic006G058000 Sobic010G078700--Sobic010G020600 Sobic010G078700--Sobic001G221900 Sobic010G078700--Sobic004G248100 Sobic004G274600 Sobic004G274600 Sobic010G078700--Sobic004G274600 Sobic010G078700--Sobic001G470200 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic010G192500--Sobic003G089300 Sobic002G337600 Sobic002G337600 Sobic010G192500--Sobic002G337600 Sobic003G366000 Sobic003G366000 Sobic010G192500--Sobic003G366000 Sobic010G241100 Sobic010G241100 Sobic010G192500--Sobic010G241100 Sobic010G192500--Sobic001G155700 Sobic010G192500--Sobic001G493900 Sobic002G319300 Sobic002G319300 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic004G317200--Sobic010G020600 Sobic004G317200--Sobic004G357000 Sobic004G317200--Sobic001G470200 Sobic004G317200--Sobic003G089300 Sobic004G317200--Sobic001G390400 Sobic006G241800 Sobic006G241800 Sobic004G317200--Sobic006G241800 Sobic007G211200 Sobic007G211200 Sobic004G317200--Sobic007G211200 Sobic004G317200--Sobic007G160300 Sobic004G317200--Sobic006G058000 Sobic003G089300--Sobic007G211200 Sobic003G089300--Sobic009G060800 Sobic003G089300--Sobic010G192500 Sobic002G032500 Sobic002G032500 Sobic003G089300--Sobic002G032500 Sobic003G089300--Sobic004G357000 Sobic003G089300--Sobic007G160300 Sobic001G286700 Sobic001G286700 Sobic003G089300--Sobic001G286700 Sobic004G211700 Sobic004G211700 Sobic003G089300--Sobic004G211700 Sobic003G089300--Sobic001G155700 Sobic001G390400--Sobic003G366000 Sobic005G163400 Sobic005G163400 Sobic001G390400--Sobic005G163400 Sobic006G050900 Sobic006G050900 Sobic001G390400--Sobic006G050900 Sobic002G050700 Sobic002G050700 Sobic001G390400--Sobic002G050700 Sobic001G390400--Sobic010G192500 Sobic001G390400--Sobic004G317200 Sobic001G390400--Sobic002G319300 Sobic010G024500 Sobic010G024500 Sobic001G390400--Sobic010G024500 Sobic006G142500 Sobic006G142500 Sobic001G390400--Sobic006G142500 Sobic001G470200--Sobic004G357000 Sobic001G470200--Sobic004G317200 Sobic001G470200--Sobic010G020600 Sobic007G032100 Sobic007G032100 Sobic001G470200--Sobic007G032100 Sobic001G470200--Sobic007G165800 Sobic001G470200--Sobic004G274600 Sobic001G470200--Sobic003G089300 Sobic001G470200--Sobic008G097700 Sobic001G434100 Sobic001G434100 Sobic001G470200--Sobic001G434100 Sobic008G097700--Sobic004G274600 Sobic008G097700--Sobic010G020600 Sobic008G097700--Sobic003G089300 Sobic008G097700--Sobic004G211700 Sobic008G097700--Sobic001G470200 Sobic008G097700--Sobic002G032500 Sobic008G097700--Sobic003G070600 Sobic008G097700--Sobic007G160300 Sobic003G300400 Sobic003G300400 Sobic008G097700--Sobic003G300400
Octagon: transcription factors


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