Gene annotation
Transcriptome id Sobic.004G302700.2,Sobic.004G302700.1
Synonym YAB1, Sb04g033590, AFO, FIL
Functional annotation YABBY domain containing protein, putative, expressed
UniProt C5XS56
Pfam PF04690
Panther DB PTHR31675 PTHR31675:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development


Orthologs (automatic annotation)
TAIR AT2G45190 : Plant-specific transcription factor YABBY family protein
RAP-DB (Rice) LOC_Os02g42950.1 : YABBY domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a020971 , Zm00025a056602
Brachypodium KQK00524
Barley HORVU6Hr1G060770.3 , HORVU6Hr1G060770.8 , HORVU6Hr1G060770.9 , HORVU6Hr1G060770.1 , HORVU6Hr1G060770.2 , HORVU6Hr1G060770.4 , HORVU6Hr1G060770.5 , HORVU6Hr1G060770.6 , HORVU6Hr1G060770.7 , HORVU6Hr1G060770.12 , HORVU6Hr1G060770.13 , HORVU6Hr1G060770.10 , HORVU6Hr1G060770.11 , HORVU6Hr1G060770.14 , HORVU6Hr1G060770.15
Wheat TraesCS6A02G237700 , TraesCS6B02G266200 , TraesCS6D02G220400 , TraesCS6D02G220400 , TraesCS2D02G382700 , TraesCS6B02G266200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G046400 expressed protein -
2 Sobic.003G366000 DUF623 domain containing protein, expressed -
3 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
5 Sobic.009G141300 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.008G150500 - -
7 Sobic.003G283900 leucine-rich repeat family protein, putative, expressed -
8 Sobic.002G011000 expressed protein -
9 Sobic.007G115400 receptor-like protein kinase 5 precursor, putative, expressed -
10 Sobic.001G119200 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.009G060800 carboxyl-terminal proteinase, putative, expressed -
12 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
13 Sobic.009G254500 protein kinase, putative, expressed -
14 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.004G211700 - -
16 Sobic.004G211800 - -
17 Sobic.003G016200 expressed protein -
18 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase
19 Sobic.006G058000 OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
20 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5


Gene co-expression network
sample Sobic004G302700 Sobic004G302700 Sobic001G046400 Sobic001G046400 Sobic004G302700--Sobic001G046400 Sobic003G366000 Sobic003G366000 Sobic004G302700--Sobic003G366000 Sobic001G135600 Sobic001G135600 Sobic004G302700--Sobic001G135600 Sobic006G187000 Sobic006G187000 Sobic004G302700--Sobic006G187000 Sobic009G141300 Sobic009G141300 Sobic004G302700--Sobic009G141300 Sobic008G150500 Sobic008G150500 Sobic004G302700--Sobic008G150500 Sobic003G283900 Sobic003G283900 Sobic004G302700--Sobic003G283900 Sobic002G011000 Sobic002G011000 Sobic004G302700--Sobic002G011000 Sobic007G115400 Sobic007G115400 Sobic004G302700--Sobic007G115400 Sobic007G211200 Sobic007G211200 Sobic001G046400--Sobic007G211200 Sobic001G046400--Sobic008G150500 Sobic001G046400--Sobic006G187000 Sobic001G046400--Sobic004G302700 Sobic004G342000 Sobic004G342000 Sobic001G046400--Sobic004G342000 Sobic002G337600 Sobic002G337600 Sobic001G046400--Sobic002G337600 Sobic003G016200 Sobic003G016200 Sobic001G046400--Sobic003G016200 Sobic004G211700 Sobic004G211700 Sobic001G046400--Sobic004G211700 Sobic001G046400--Sobic003G283900 Sobic006G110850 Sobic006G110850 Sobic003G366000--Sobic006G110850 Sobic003G366000--Sobic006G187000 Sobic009G060800 Sobic009G060800 Sobic003G366000--Sobic009G060800 Sobic003G366000--Sobic004G302700 Sobic010G192500 Sobic010G192500 Sobic003G366000--Sobic010G192500 Sobic001G390400 Sobic001G390400 Sobic003G366000--Sobic001G390400 Sobic001G160000 Sobic001G160000 Sobic003G366000--Sobic001G160000 Sobic003G366000--Sobic001G046400 Sobic008G190000 Sobic008G190000 Sobic003G366000--Sobic008G190000 Sobic001G135600--Sobic009G141300 Sobic001G135600--Sobic004G302700 Sobic001G135600--Sobic004G211700 Sobic003G089300 Sobic003G089300 Sobic001G135600--Sobic003G089300 Sobic001G135600--Sobic007G211200 Sobic001G135600--Sobic001G046400 Sobic001G286700 Sobic001G286700 Sobic001G135600--Sobic001G286700 Sobic001G135600--Sobic002G011000 Sobic009G254500 Sobic009G254500 Sobic001G135600--Sobic009G254500 Sobic006G187000--Sobic008G150500 Sobic009G137500 Sobic009G137500 Sobic006G187000--Sobic009G137500 Sobic006G187000--Sobic001G046400 Sobic006G187000--Sobic003G366000 Sobic006G187000--Sobic004G302700 Sobic006G187000--Sobic001G160000 Sobic006G187000--Sobic003G016200 Sobic006G187000--Sobic003G283900 Sobic001G267100 Sobic001G267100 Sobic006G187000--Sobic001G267100 Sobic009G141300--Sobic009G254500 Sobic009G141300--Sobic002G011000 Sobic009G141300--Sobic001G135600 Sobic009G141300--Sobic004G302700 Sobic001G119200 Sobic001G119200 Sobic009G141300--Sobic001G119200 Sobic003G309400 Sobic003G309400 Sobic009G141300--Sobic003G309400 Sobic009G141300--Sobic004G211700 Sobic009G141300--Sobic004G342000 Sobic002G416400 Sobic002G416400 Sobic009G141300--Sobic002G416400 Sobic008G150500--Sobic006G187000 Sobic008G150500--Sobic001G046400 Sobic008G150500--Sobic003G283900 Sobic004G211800 Sobic004G211800 Sobic008G150500--Sobic004G211800 Sobic008G150500--Sobic003G016200 Sobic008G150500--Sobic004G302700 Sobic002G029700 Sobic002G029700 Sobic008G150500--Sobic002G029700 Sobic008G150500--Sobic009G137500 Sobic008G150500--Sobic004G342000 Sobic003G283900--Sobic003G016200 Sobic003G283900--Sobic004G211800 Sobic003G283900--Sobic008G150500 Sobic003G283900--Sobic001G046400 Sobic003G283900--Sobic004G302700 Sobic003G283900--Sobic006G187000 Sobic003G283900--Sobic007G115400 Sobic003G283900--Sobic004G211700 Sobic010G023400 Sobic010G023400 Sobic003G283900--Sobic010G023400 Sobic002G011000--Sobic009G254500 Sobic002G011000--Sobic001G119200 Sobic006G160800 Sobic006G160800 Sobic002G011000--Sobic006G160800 Sobic002G011000--Sobic009G141300 Sobic005G042200 Sobic005G042200 Sobic002G011000--Sobic005G042200 Sobic004G062100 Sobic004G062100 Sobic002G011000--Sobic004G062100 Sobic001G438500 Sobic001G438500 Sobic002G011000--Sobic001G438500 Sobic002G011000--Sobic002G029700 Sobic008G012600 Sobic008G012600 Sobic002G011000--Sobic008G012600 Sobic007G115400--Sobic004G211700 Sobic007G115400--Sobic004G302700 Sobic007G115400--Sobic001G046400 Sobic009G023900 Sobic009G023900 Sobic007G115400--Sobic009G023900 Sobic006G117900 Sobic006G117900 Sobic007G115400--Sobic006G117900 Sobic005G110900 Sobic005G110900 Sobic007G115400--Sobic005G110900 Sobic007G115400--Sobic003G283900 Sobic007G115400--Sobic004G211800 Sobic001G341700 Sobic001G341700 Sobic007G115400--Sobic001G341700
Octagon: transcription factors


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